RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 GGA3Q9NZ52 723 aa17.49■□□□□ 0.39
EPCAM-204ENST00000456133 ASTN2O75129 1339 aaPredicted RBP17.49■□□□□ 0.39
EPCAM-204ENST00000456133 KRT24Q2M2I5 525 aa17.48■□□□□ 0.39
EPCAM-204ENST00000456133 SULF1Q8IWU6 871 aa17.48■□□□□ 0.39
EPCAM-204ENST00000456133 EYA3Q99504 573 aa17.48■□□□□ 0.39
EPCAM-204ENST00000456133 CTU1Q7Z7A3 348 aaKnown RBP17.47■□□□□ 0.39
EPCAM-204ENST00000456133 TBC1D16Q8TBP0 767 aa17.47■□□□□ 0.39
EPCAM-204ENST00000456133 CDCA5Q96FF9 252 aa17.47■□□□□ 0.39
EPCAM-204ENST00000456133 ATP5J2-PTCD1G3V325 749 aa17.47■□□□□ 0.39
EPCAM-204ENST00000456133 ISCA1Q9BUE6 129 aa17.47■□□□□ 0.39
EPCAM-204ENST00000456133 CHPF2Q9P2E5 772 aa17.47■□□□□ 0.39
EPCAM-204ENST00000456133 VIL1P09327 827 aaKnown RBP17.46■□□□□ 0.39
EPCAM-204ENST00000456133 RTL5Q5HYW3 569 aaPredicted RBP17.46■□□□□ 0.39
EPCAM-204ENST00000456133 RASAL3Q86YV0 1011 aa17.46■□□□□ 0.39
EPCAM-204ENST00000456133 PLBD2Q8NHP8 589 aa17.46■□□□□ 0.39
EPCAM-204ENST00000456133 PAPPA2Q9BXP8 1791 aa17.45■□□□□ 0.38
EPCAM-204ENST00000456133 TMPOP42166 694 aaKnown RBP17.45■□□□□ 0.38
EPCAM-204ENST00000456133 ANKRD13DQ6ZTN6 518 aa17.45■□□□□ 0.38
EPCAM-204ENST00000456133 ZC3H12CQ9C0D7 883 aaKnown RBP17.45■□□□□ 0.38
EPCAM-204ENST00000456133 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
EPCAM-204ENST00000456133 LMOD3Q0VAK6 560 aa17.44■□□□□ 0.38
EPCAM-204ENST00000456133 G3V3G9 751 aa17.43■□□□□ 0.38
EPCAM-204ENST00000456133 IRS4O14654 1257 aaPredicted RBP17.43■□□□□ 0.38
EPCAM-204ENST00000456133 SCARF1Q14162 830 aa17.43■□□□□ 0.38
EPCAM-204ENST00000456133 DCAF8Q5TAQ9 597 aa17.43■□□□□ 0.38
EPCAM-204ENST00000456133 ANGEL2Q5VTE6 544 aaKnown RBP17.43■□□□□ 0.38
EPCAM-204ENST00000456133 PRPF38BQ5VTL8 546 aaKnown RBP17.43■□□□□ 0.38
EPCAM-204ENST00000456133 REM2Q8IYK8 340 aaPredicted RBP17.43■□□□□ 0.38
EPCAM-204ENST00000456133 HDGFL1Q5TGJ6 251 aa17.42■□□□□ 0.38
EPCAM-204ENST00000456133 HPS5Q9UPZ3 1129 aa17.42■□□□□ 0.38
EPCAM-204ENST00000456133 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
EPCAM-204ENST00000456133 CHL1O00533 1208 aa17.42■□□□□ 0.38
EPCAM-204ENST00000456133 UFL1O94874 794 aa17.42■□□□□ 0.38
EPCAM-204ENST00000456133 ZNF280AP59817 542 aaPredicted RBP17.42■□□□□ 0.38
EPCAM-204ENST00000456133 SEC31BQ9NQW1 1179 aa17.42■□□□□ 0.38
EPCAM-204ENST00000456133 PODXL2Q9NZ53 605 aa17.42■□□□□ 0.38
EPCAM-204ENST00000456133 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
EPCAM-204ENST00000456133 RSBN1LQ6PCB5 846 aaPredicted RBP17.41■□□□□ 0.38
EPCAM-204ENST00000456133 MOB2Q70IA6 237 aa17.41■□□□□ 0.38
EPCAM-204ENST00000456133 SPEF2Q9C093 1822 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 ZNF609O15014 1411 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 FKBP1BP68106 108 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 AGBL3Q8NEM8 1001 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 ANKIB1Q9P2G1 1089 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
EPCAM-204ENST00000456133 GGA1Q9UJY5 639 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 HDAC9Q9UKV0 1011 aa17.4■□□□□ 0.38
EPCAM-204ENST00000456133 SCAF8Q9UPN6 1271 aaKnown RBP17.4■□□□□ 0.38
EPCAM-204ENST00000456133 TBC1D8O95759 1140 aa17.39■□□□□ 0.37
EPCAM-204ENST00000456133 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.37
EPCAM-204ENST00000456133 ZNF646O15015 1829 aaPredicted RBP17.38■□□□□ 0.37
EPCAM-204ENST00000456133 UBE2Q2LH0YL09 131 aa17.38■□□□□ 0.37
EPCAM-204ENST00000456133 ZNF296Q8WUU4 475 aaPredicted RBP17.38■□□□□ 0.37
EPCAM-204ENST00000456133 GMLQ99445 158 aa17.38■□□□□ 0.37
EPCAM-204ENST00000456133 MYOZ2Q9NPC6 264 aa17.38■□□□□ 0.37
EPCAM-204ENST00000456133 PITPNM2Q9BZ72 1349 aa17.38■□□□□ 0.37
EPCAM-204ENST00000456133 USP17L8P0C7I0 530 aa17.37■□□□□ 0.37
EPCAM-204ENST00000456133 PKN2Q16513 984 aaKnown RBP17.37■□□□□ 0.37
EPCAM-204ENST00000456133 CCDC146Q8IYE0 955 aa17.37■□□□□ 0.37
EPCAM-204ENST00000456133 HYPKQ9NX55 129 aa17.37■□□□□ 0.37
EPCAM-204ENST00000456133 HOXB7P09629 217 aa17.37■□□□□ 0.37
EPCAM-204ENST00000456133 PRAMEF18Q5VWM3 479 aa17.37■□□□□ 0.37
EPCAM-204ENST00000456133 ZBTB38Q8NAP3 1195 aaPredicted RBP17.37■□□□□ 0.37
EPCAM-204ENST00000456133 MYH3P11055 1940 aa17.36■□□□□ 0.37
EPCAM-204ENST00000456133 CCDC85AQ96PX6 553 aaPredicted RBP17.36■□□□□ 0.37
EPCAM-204ENST00000456133 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
EPCAM-204ENST00000456133 USP17L3A6NCW0 530 aa17.35■□□□□ 0.37
EPCAM-204ENST00000456133 USP17L4A6NCW7 530 aa17.35■□□□□ 0.37
EPCAM-204ENST00000456133 TTLL12Q14166 644 aaPredicted RBP17.35■□□□□ 0.37
EPCAM-204ENST00000456133 USP17L1Q7RTZ2 530 aa17.35■□□□□ 0.37
EPCAM-204ENST00000456133 RIC3Q7Z5B4 369 aa17.35■□□□□ 0.37
EPCAM-204ENST00000456133 JARID2Q92833 1246 aaPredicted RBP17.35■□□□□ 0.37
EPCAM-204ENST00000456133 GPR25O00155 361 aa17.34■□□□□ 0.37
EPCAM-204ENST00000456133 TM4SF4P48230 202 aa17.34■□□□□ 0.37
EPCAM-204ENST00000456133 MKRN3Q13064 507 aaKnown RBP17.34■□□□□ 0.37
EPCAM-204ENST00000456133 NBPF9Q3BBW0 867 aa17.34■□□□□ 0.37
EPCAM-204ENST00000456133 CCDC152Q4G0S7 254 aa17.34■□□□□ 0.37
EPCAM-204ENST00000456133 DUSP27Q5VZP5 1158 aa17.34■□□□□ 0.37
EPCAM-204ENST00000456133 XDHP47989 1333 aa17.34■□□□□ 0.37
EPCAM-204ENST00000456133 HSP90B1P14625 803 aaKnown RBP17.33■□□□□ 0.37
EPCAM-204ENST00000456133 MYD88Q99836 296 aa17.33■□□□□ 0.37
EPCAM-204ENST00000456133 PDE8AO60658 829 aa17.32■□□□□ 0.36
EPCAM-204ENST00000456133 ATP2B4P23634 1241 aa17.32■□□□□ 0.36
EPCAM-204ENST00000456133 GOLGA2Q08379 1002 aa17.32■□□□□ 0.36
EPCAM-204ENST00000456133 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
EPCAM-204ENST00000456133 PODNQ7Z5L7 613 aa17.32■□□□□ 0.36
EPCAM-204ENST00000456133 PHAXQ9H814 394 aaKnown RBP17.32■□□□□ 0.36
EPCAM-204ENST00000456133 WTIPA6NIX2 430 aaPredicted RBP17.31■□□□□ 0.36
EPCAM-204ENST00000456133 PCCAP05165 728 aaPredicted RBP17.31■□□□□ 0.36
EPCAM-204ENST00000456133 ANKRD18AQ8IVF6 992 aa17.31■□□□□ 0.36
EPCAM-204ENST00000456133 MXD3Q9BW11 206 aa17.31■□□□□ 0.36
EPCAM-204ENST00000456133 NOM1Q5C9Z4 860 aaKnown RBP17.31■□□□□ 0.36
EPCAM-204ENST00000456133 CCDC191Q8NCU4 936 aa17.31■□□□□ 0.36
EPCAM-204ENST00000456133 NF2P35240 595 aa17.3■□□□□ 0.36
EPCAM-204ENST00000456133 RUNDC1Q96C34 613 aa17.3■□□□□ 0.36
EPCAM-204ENST00000456133 R3HDMLQ9H3Y0 253 aa17.3■□□□□ 0.36
EPCAM-204ENST00000456133 FKTNO75072 461 aa17.29■□□□□ 0.36
EPCAM-204ENST00000456133 PTPN12Q05209 780 aaKnown RBP17.29■□□□□ 0.36
EPCAM-204ENST00000456133 SREBF2Q12772 1141 aa17.29■□□□□ 0.36
EPCAM-204ENST00000456133 RALBP1Q15311 655 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms