RNA–Protein interactions for RNA: ENST00000455987.5

SYCP1-203, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best)

Gene SYCP1, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-203ENST00000455987 ANXA1P04083 346 aa7.73□□□□□ -1.17
SYCP1-203ENST00000455987 VIL1P09327 827 aaKnown RBP7.73□□□□□ -1.17
SYCP1-203ENST00000455987 EIF2S2P20042 333 aaKnown RBP7.73□□□□□ -1.17
SYCP1-203ENST00000455987 SF3B3Q15393 1217 aaKnown RBP7.73□□□□□ -1.17
SYCP1-203ENST00000455987 COPS6Q7L5N1 327 aa7.73□□□□□ -1.17
SYCP1-203ENST00000455987 ZNF296Q8WUU4 475 aaPredicted RBP7.73□□□□□ -1.17
SYCP1-203ENST00000455987 CELF1Q92879 486 aaKnown RBP7.73□□□□□ -1.17
SYCP1-203ENST00000455987 KCNQ5Q9NR82 932 aa7.73□□□□□ -1.17
SYCP1-203ENST00000455987 HDAC9Q9UKV0 1011 aa7.73□□□□□ -1.17
SYCP1-203ENST00000455987 ASTN2O75129 1339 aaPredicted RBP7.73□□□□□ -1.17
SYCP1-203ENST00000455987 COL4A1P02462 1669 aa7.73□□□□□ -1.17
SYCP1-203ENST00000455987 ZNF280AP59817 542 aaPredicted RBP7.72□□□□□ -1.17
SYCP1-203ENST00000455987 GPSM2P81274 684 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 FBXO46Q6PJ61 603 aaPredicted RBP7.72□□□□□ -1.17
SYCP1-203ENST00000455987 TSPYL4Q9UJ04 414 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 DOK7Q18PE1 504 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 TBC1D16Q8TBP0 767 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 XAGE3Q8WTP9 111 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 NECTIN2Q92692 538 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 BABAM1Q9NWV8 329 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 PITPNM2Q9BZ72 1349 aa7.72□□□□□ -1.17
SYCP1-203ENST00000455987 ANGEL2Q5VTE6 544 aaKnown RBP7.71□□□□□ -1.17
SYCP1-203ENST00000455987 AGBL3Q8NEM8 1001 aa7.71□□□□□ -1.17
SYCP1-203ENST00000455987 CEP290O15078 2479 aa7.71□□□□□ -1.17
SYCP1-203ENST00000455987 RBBP6Q7Z6E9 1792 aaKnown RBP7.71□□□□□ -1.18
SYCP1-203ENST00000455987 GPR25O00155 361 aa7.71□□□□□ -1.18
SYCP1-203ENST00000455987 TBC1D8O95759 1140 aa7.71□□□□□ -1.18
SYCP1-203ENST00000455987 TM4SF4P48230 202 aa7.71□□□□□ -1.18
SYCP1-203ENST00000455987 AIMP1Q12904 312 aaKnown RBP7.71□□□□□ -1.18
SYCP1-203ENST00000455987 SCARF1Q14162 830 aa7.71□□□□□ -1.18
SYCP1-203ENST00000455987 CCER1Q8TC90 406 aaPredicted RBP7.71□□□□□ -1.18
SYCP1-203ENST00000455987 CFHR5Q9BXR6 569 aa7.71□□□□□ -1.18
SYCP1-203ENST00000455987 ZC3H12CQ9C0D7 883 aaKnown RBP7.71□□□□□ -1.18
SYCP1-203ENST00000455987 PODXL2Q9NZ53 605 aa7.71□□□□□ -1.18
SYCP1-203ENST00000455987 ISCA1Q9BUE6 129 aa7.7□□□□□ -1.18
SYCP1-203ENST00000455987 MAPK8IP3Q9UPT6 1336 aa7.7□□□□□ -1.18
SYCP1-203ENST00000455987 RPS8P62241 208 aaKnown RBP7.7□□□□□ -1.18
SYCP1-203ENST00000455987 HABP4Q5JVS0 413 aaKnown RBP7.7□□□□□ -1.18
SYCP1-203ENST00000455987 RSBN1LQ6PCB5 846 aaPredicted RBP7.7□□□□□ -1.18
SYCP1-203ENST00000455987 GMLQ99445 158 aa7.7□□□□□ -1.18
SYCP1-203ENST00000455987 PNNQ9H307 717 aaKnown RBP7.7□□□□□ -1.18
SYCP1-203ENST00000455987 PLBD2Q8NHP8 589 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 FAM89AQ96GI7 184 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 UBE2Q2LH0YL09 131 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 USP17L8P0C7I0 530 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 MOB2Q70IA6 237 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 MYOZ2Q9NPC6 264 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 LAMB1P07942 1786 aa7.69□□□□□ -1.18
SYCP1-203ENST00000455987 HTTP42858 3142 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 TRIOBPQ9H2D6 2365 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 G3V3G9 751 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 FKTNO75072 461 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 UFL1O94874 794 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 SREBF2Q12772 1141 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 TRIM28Q13263 835 aaKnown RBP7.68□□□□□ -1.18
SYCP1-203ENST00000455987 DCAF8Q5TAQ9 597 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 GGA1Q9UJY5 639 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 ZNF646O15015 1829 aaPredicted RBP7.68□□□□□ -1.18
SYCP1-203ENST00000455987 MKI67P46013 3256 aaKnown RBP7.68□□□□□ -1.18
SYCP1-203ENST00000455987 IRS4O14654 1257 aaPredicted RBP7.68□□□□□ -1.18
SYCP1-203ENST00000455987 ANKRD13DQ6ZTN6 518 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 ZNF428Q96B54 188 aa7.68□□□□□ -1.18
SYCP1-203ENST00000455987 INTS3Q68E01 1043 aaKnown RBP7.67□□□□□ -1.18
SYCP1-203ENST00000455987 PODNQ7Z5L7 613 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 CHPF2Q9P2E5 772 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 ANKIB1Q9P2G1 1089 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 USP17L3A6NCW0 530 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 USP17L4A6NCW7 530 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 ATP5J2-PTCD1G3V325 749 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 NF2P35240 595 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 RIPK4P57078 832 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 LMOD3Q0VAK6 560 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 TTLL12Q14166 644 aaPredicted RBP7.67□□□□□ -1.18
SYCP1-203ENST00000455987 USP17L1Q7RTZ2 530 aa7.67□□□□□ -1.18
SYCP1-203ENST00000455987 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 HSP90B1P14625 803 aaKnown RBP7.66□□□□□ -1.18
SYCP1-203ENST00000455987 NBPF9Q3BBW0 867 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 PRAMEF18Q5VWM3 479 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 R3HDMLQ9H3Y0 253 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 DBF4Q9UBU7 674 aaPredicted RBP7.66□□□□□ -1.18
SYCP1-203ENST00000455987 XDHP47989 1333 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 HOXB7P09629 217 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 RTL5Q5HYW3 569 aaPredicted RBP7.66□□□□□ -1.18
SYCP1-203ENST00000455987 SEC31BQ9NQW1 1179 aa7.66□□□□□ -1.18
SYCP1-203ENST00000455987 SCAF8Q9UPN6 1271 aaKnown RBP7.66□□□□□ -1.18
SYCP1-203ENST00000455987 CHL1O00533 1208 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 MMP14P50281 582 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 FXR1P51114 621 aaKnown RBP eCLIP7.65□□□□□ -1.18
SYCP1-203ENST00000455987 PTPN12Q05209 780 aaKnown RBP7.65□□□□□ -1.18
SYCP1-203ENST00000455987 MKRN3Q13064 507 aaKnown RBP7.65□□□□□ -1.18
SYCP1-203ENST00000455987 KRT24Q2M2I5 525 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 LDLRAD1Q5T700 205 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 HDGFL1Q5TGJ6 251 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 SPRYD7Q5W111 196 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 ZBTB38Q8NAP3 1195 aaPredicted RBP7.65□□□□□ -1.18
SYCP1-203ENST00000455987 MYO3BQ8WXR4 1341 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 POTEFA5A3E0 1075 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 WNT10BO00744 389 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 ATP2B4P23634 1241 aa7.65□□□□□ -1.18
SYCP1-203ENST00000455987 INHBEP58166 350 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms