RNA–Protein interactions for RNA: ENST00000455659.1

COMMD1-205, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-205ENST00000455659 CEP350Q5VT06 3117 aa8.88□□□□□ -0.99
COMMD1-205ENST00000455659 C6orf229H3BNL8 230 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 CSF1RP07333 972 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 CCDC57Q2TAC2 916 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 RABL6Q3YEC7 729 aaPredicted RBP8.87□□□□□ -0.99
COMMD1-205ENST00000455659 INTS3Q68E01 1043 aaKnown RBP8.87□□□□□ -0.99
COMMD1-205ENST00000455659 ANKRD44Q8N8A2 993 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 JDP2Q8WYK2 163 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 USP44Q9H0E7 712 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 GGA1Q9UJY5 639 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 RCAN3Q9UKA8 241 aa8.87□□□□□ -0.99
COMMD1-205ENST00000455659 NSFL1CQ9UNZ2 370 aaKnown RBP8.87□□□□□ -0.99
COMMD1-205ENST00000455659 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 KIAA2012Q0VF49 1180 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 ITPRIPQ8IWB1 547 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 DZIP1LQ8IYY4 767 aaKnown RBP8.86□□□□□ -0.99
COMMD1-205ENST00000455659 TMEM57Q8N5G2 664 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 TBC1D16Q8TBP0 767 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 KAZALD1Q96I82 304 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 GPR101Q96P66 508 aaPredicted RBP8.86□□□□□ -0.99
COMMD1-205ENST00000455659 EYA3Q99504 573 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 NMRK2Q9NPI5 230 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 BSDC1Q9NW68 430 aaPredicted RBP8.86□□□□□ -0.99
COMMD1-205ENST00000455659 PODXL2Q9NZ53 605 aa8.86□□□□□ -0.99
COMMD1-205ENST00000455659 LRRFIP2Q9Y608 721 aaKnown RBP8.86□□□□□ -0.99
COMMD1-205ENST00000455659 GLTPD2A6NH11 291 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 GNAI3P08754 354 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 RLBP1P12271 317 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 KCNJ4P48050 445 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 EIF6P56537 245 aaKnown RBP8.85□□□□□ -0.99
COMMD1-205ENST00000455659 CHRNDQ07001 517 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 CNNM1Q9NRU3 951 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 POLLQ9UGP5 575 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 ADAMTSL1Q8N6G6 1762 aa8.85□□□□□ -0.99
COMMD1-205ENST00000455659 FZD9O00144 591 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 ATP2B4P23634 1241 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 WASHC4Q2M389 1173 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 DPY19L2Q6NUT2 758 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 ZNF594Q96JF6 807 aaPredicted RBP8.84□□□□□ -0.99
COMMD1-205ENST00000455659 ANKRD2Q9GZV1 360 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 VPS33BQ9H267 617 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 DBNDD1Q9H9R9 158 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 MINPP1Q9UNW1 487 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 HDAC5Q9UQL6 1122 aa8.84□□□□□ -0.99
COMMD1-205ENST00000455659 KIF3CO14782 793 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 RIMBP2O15034 1052 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 ECE2O60344 883 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 DDNO94850 711 aaPredicted RBP8.83□□□□□ -1
COMMD1-205ENST00000455659 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 C16orf71Q8IYS4 520 aaPredicted RBP8.83□□□□□ -1
COMMD1-205ENST00000455659 GPC2Q8N158 579 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 PANK1Q8TE04 598 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 ZNRF3Q9ULT6 936 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 GJA3Q9Y6H8 435 aa8.83□□□□□ -1
COMMD1-205ENST00000455659 ZNF804BA4D1E1 1349 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 ZNF609O15014 1411 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 IQCA1LA6NCM1 817 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 YDJCA8MPS7 323 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 G3V3G9 751 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 RAD17O75943 681 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 GNAI2P04899 355 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 MS4A1P11836 297 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 KLRK1P26718 216 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 METTL24Q5JXM2 366 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 DCAF8Q5TAQ9 597 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.82□□□□□ -1
COMMD1-205ENST00000455659 KLHDC4Q8TBB5 520 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 L3MBTL3Q96JM7 780 aaPredicted RBP8.82□□□□□ -1
COMMD1-205ENST00000455659 ZC3H12CQ9C0D7 883 aaKnown RBP8.82□□□□□ -1
COMMD1-205ENST00000455659 C1orf115Q9H7X2 142 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 ECM29Q5VYK3 1845 aa8.82□□□□□ -1
COMMD1-205ENST00000455659 MROH5Q6ZUA9 1318 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 SRGAP3O43295 1099 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 PLIN1O60240 522 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 TAF5LO75529 589 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 LMOD1P29536 600 aaPredicted RBP8.81□□□□□ -1
COMMD1-205ENST00000455659 MVPQ14764 893 aaKnown RBP8.81□□□□□ -1
COMMD1-205ENST00000455659 DOK7Q18PE1 504 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 CIAPIN1Q6FI81 312 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 HELBQ8NG08 1087 aaPredicted RBP8.81□□□□□ -1
COMMD1-205ENST00000455659 PUS3Q9BZE2 481 aaKnown RBP8.81□□□□□ -1
COMMD1-205ENST00000455659 SIL1Q9H173 461 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 LEMD3Q9Y2U8 911 aa8.81□□□□□ -1
COMMD1-205ENST00000455659 SNAP23O00161 211 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 VEGFAP15692 232 aaPredicted RBP8.8□□□□□ -1
COMMD1-205ENST00000455659 RFX5P48382 616 aaPredicted RBP8.8□□□□□ -1
COMMD1-205ENST00000455659 GMPSP49915 693 aaPredicted RBP8.8□□□□□ -1
COMMD1-205ENST00000455659 SCNN1DP51172 638 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 CXCL9Q07325 125 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 MTX1Q13505 466 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 LRRC24Q50LG9 513 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 ZNF804AQ7Z570 1209 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 FBXW7Q969H0 707 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 RRAGCQ9HB90 399 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 HACL1Q9UJ83 578 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 DDX19BQ9UMR2 479 aa8.8□□□□□ -1
COMMD1-205ENST00000455659 TRPM7Q96QT4 1865 aa8.79□□□□□ -1
COMMD1-205ENST00000455659 MAST2Q6P0Q8 1798 aa8.79□□□□□ -1
COMMD1-205ENST00000455659 WTIPA6NIX2 430 aaPredicted RBP8.79□□□□□ -1
COMMD1-205ENST00000455659 EYA2O00167 538 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms