RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 SUPT20HQ8NEM7 779 aa18.42■□□□□ 0.54
CLCN1-203ENST00000455478 VPS33BQ9H267 617 aa18.42■□□□□ 0.54
CLCN1-203ENST00000455478 WTIPA6NIX2 430 aaPredicted RBP18.41■□□□□ 0.54
CLCN1-203ENST00000455478 RFX5P48382 616 aaPredicted RBP18.41■□□□□ 0.54
CLCN1-203ENST00000455478 C20orf194Q5TEA3 1177 aa18.41■□□□□ 0.54
CLCN1-203ENST00000455478 LDHAL6AQ6ZMR3 332 aa18.41■□□□□ 0.54
CLCN1-203ENST00000455478 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.41■□□□□ 0.54
CLCN1-203ENST00000455478 TBC1D16Q8TBP0 767 aa18.41■□□□□ 0.54
CLCN1-203ENST00000455478 ANKIB1Q9P2G1 1089 aa18.41■□□□□ 0.54
CLCN1-203ENST00000455478 COL4A5P29400 1685 aa18.41■□□□□ 0.54
CLCN1-203ENST00000455478 C6orf229H3BNL8 230 aa18.4■□□□□ 0.54
CLCN1-203ENST00000455478 GNAI2P04899 355 aa18.4■□□□□ 0.54
CLCN1-203ENST00000455478 PDE3AQ14432 1141 aa18.4■□□□□ 0.54
CLCN1-203ENST00000455478 AOC3Q16853 763 aa18.4■□□□□ 0.54
CLCN1-203ENST00000455478 TAF7LQ5H9L4 462 aa18.4■□□□□ 0.54
CLCN1-203ENST00000455478 PUS3Q9BZE2 481 aaKnown RBP18.4■□□□□ 0.54
CLCN1-203ENST00000455478 XDHP47989 1333 aa18.4■□□□□ 0.54
CLCN1-203ENST00000455478 ZC3H4Q9UPT8 1303 aaKnown RBP18.4■□□□□ 0.54
CLCN1-203ENST00000455478 PPIP5K2O43314 1243 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 CHRNDQ07001 517 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 KIAA2012Q0VF49 1180 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 LARGE2Q8N3Y3 721 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 ZNF784Q8NCA9 323 aaPredicted RBP18.39■□□□□ 0.53
CLCN1-203ENST00000455478 KLHDC4Q8TBB5 520 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 GPR101Q96P66 508 aaPredicted RBP18.39■□□□□ 0.53
CLCN1-203ENST00000455478 GGA1Q9UJY5 639 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 COG6Q9Y2V7 657 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 TIAM2Q8IVF5 1701 aa18.39■□□□□ 0.53
CLCN1-203ENST00000455478 UFL1O94874 794 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 ATP2B4P23634 1241 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 PTPN12Q05209 780 aaKnown RBP18.38■□□□□ 0.53
CLCN1-203ENST00000455478 MTX1Q13505 466 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 MVPQ14764 893 aaKnown RBP18.38■□□□□ 0.53
CLCN1-203ENST00000455478 WASHC4Q2M389 1173 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 ANKRD2Q9GZV1 360 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 CNNM1Q9NRU3 951 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 RIPOR2Q9Y4F9 1068 aa18.38■□□□□ 0.53
CLCN1-203ENST00000455478 FZD9O00144 591 aa18.37■□□□□ 0.53
CLCN1-203ENST00000455478 LRRC24Q50LG9 513 aa18.37■□□□□ 0.53
CLCN1-203ENST00000455478 HELBQ8NG08 1087 aaPredicted RBP18.37■□□□□ 0.53
CLCN1-203ENST00000455478 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
CLCN1-203ENST00000455478 RIMBP2O15034 1052 aa18.36■□□□□ 0.53
CLCN1-203ENST00000455478 EYA3Q99504 573 aa18.36■□□□□ 0.53
CLCN1-203ENST00000455478 LEMD3Q9Y2U8 911 aa18.36■□□□□ 0.53
CLCN1-203ENST00000455478 A0A1B0GUL6 1792 aa18.35■□□□□ 0.53
CLCN1-203ENST00000455478 GLTPD2A6NH11 291 aa18.35■□□□□ 0.53
CLCN1-203ENST00000455478 TAF5LO75529 589 aa18.35■□□□□ 0.53
CLCN1-203ENST00000455478 RRP1P56182 461 aaKnown RBP18.35■□□□□ 0.53
CLCN1-203ENST00000455478 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
CLCN1-203ENST00000455478 C1orf115Q9H7X2 142 aa18.35■□□□□ 0.53
CLCN1-203ENST00000455478 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
CLCN1-203ENST00000455478 ZNF804BA4D1E1 1349 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 SNAP23O00161 211 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 EYA2O00167 538 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 SRGAP3O43295 1099 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 ATP8B2P98198 1209 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 NIM1KQ8IY84 436 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 ZC3H12CQ9C0D7 883 aaKnown RBP18.34■□□□□ 0.53
CLCN1-203ENST00000455478 COPRSQ9NQ92 184 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 ZBTB40Q9NUA8 1239 aa18.34■□□□□ 0.53
CLCN1-203ENST00000455478 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.53
CLCN1-203ENST00000455478 ZNF541Q9H0D2 1346 aa18.33■□□□□ 0.53
CLCN1-203ENST00000455478 PNMA6EA0A0J9YXQ4 647 aa18.33■□□□□ 0.52
CLCN1-203ENST00000455478 DOK7Q18PE1 504 aa18.33■□□□□ 0.52
CLCN1-203ENST00000455478 DPY19L2Q6NUT2 758 aa18.33■□□□□ 0.52
CLCN1-203ENST00000455478 ATG9AQ7Z3C6 839 aa18.33■□□□□ 0.52
CLCN1-203ENST00000455478 ZNRF3Q9ULT6 936 aa18.33■□□□□ 0.52
CLCN1-203ENST00000455478 PA2G4Q9UQ80 394 aaKnown RBP18.33■□□□□ 0.52
CLCN1-203ENST00000455478 YDJCA8MPS7 323 aa18.32■□□□□ 0.52
CLCN1-203ENST00000455478 DDNO94850 711 aaPredicted RBP18.32■□□□□ 0.52
CLCN1-203ENST00000455478 TXNRD3Q86VQ6 643 aa18.32■□□□□ 0.52
CLCN1-203ENST00000455478 DBNDD1Q9H9R9 158 aa18.32■□□□□ 0.52
CLCN1-203ENST00000455478 FBXO3Q9UK99 471 aa18.32■□□□□ 0.52
CLCN1-203ENST00000455478 MED23Q9ULK4 1368 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 KDM2BQ8NHM5 1336 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 IRS2Q9Y4H2 1338 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 CIAO1O76071 339 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 KLRK1P26718 216 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
CLCN1-203ENST00000455478 POLA2Q14181 598 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 VGLL2Q8N8G2 317 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 SIL1Q9H173 461 aa18.31■□□□□ 0.52
CLCN1-203ENST00000455478 GPBP1L1Q9HC44 474 aaPredicted RBP18.31■□□□□ 0.52
CLCN1-203ENST00000455478 KCNJ4P48050 445 aa18.3■□□□□ 0.52
CLCN1-203ENST00000455478 CXCL9Q07325 125 aa18.3■□□□□ 0.52
CLCN1-203ENST00000455478 METTL24Q5JXM2 366 aa18.3■□□□□ 0.52
CLCN1-203ENST00000455478 C15orf52Q6ZUT6 534 aaKnown RBP18.3■□□□□ 0.52
CLCN1-203ENST00000455478 SSH3Q8TE77 659 aa18.3■□□□□ 0.52
CLCN1-203ENST00000455478 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
CLCN1-203ENST00000455478 POTECB2RU33 542 aa18.29■□□□□ 0.52
CLCN1-203ENST00000455478 ECE2O60344 883 aa18.29■□□□□ 0.52
CLCN1-203ENST00000455478 PDE8BO95263 885 aa18.29■□□□□ 0.52
CLCN1-203ENST00000455478 UBE4AQ14139 1066 aa18.29■□□□□ 0.52
CLCN1-203ENST00000455478 CEP85Q6P2H3 762 aa18.29■□□□□ 0.52
CLCN1-203ENST00000455478 CHMP4BQ9H444 224 aaKnown RBP18.29■□□□□ 0.52
CLCN1-203ENST00000455478 KCNQ5Q9NR82 932 aa18.29■□□□□ 0.52
CLCN1-203ENST00000455478 RAD17O75943 681 aa18.28■□□□□ 0.52
CLCN1-203ENST00000455478 GPC2Q8N158 579 aa18.28■□□□□ 0.52
CLCN1-203ENST00000455478 RRAGCQ9HB90 399 aa18.28■□□□□ 0.52
CLCN1-203ENST00000455478 SCN9AQ15858 1988 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms