RNA–Protein interactions for RNA: ENST00000455069.1

HDAC9-217, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-217ENST00000455069 C9orf78Q9NZ63 289 aaPredicted RBP14.31□□□□□ -0.12
HDAC9-217ENST00000455069 TNNQ9UQP3 1299 aa14.31□□□□□ -0.12
HDAC9-217ENST00000455069 VEGFAP15692 232 aaPredicted RBP14.3□□□□□ -0.12
HDAC9-217ENST00000455069 CACNB1Q02641 598 aaPredicted RBP14.3□□□□□ -0.12
HDAC9-217ENST00000455069 KIAA2012Q0VF49 1180 aa14.3□□□□□ -0.12
HDAC9-217ENST00000455069 SMC1BQ8NDV3 1235 aa14.3□□□□□ -0.12
HDAC9-217ENST00000455069 USP44Q9H0E7 712 aa14.3□□□□□ -0.12
HDAC9-217ENST00000455069 PODXL2Q9NZ53 605 aa14.3□□□□□ -0.12
HDAC9-217ENST00000455069 NSFL1CQ9UNZ2 370 aaKnown RBP14.3□□□□□ -0.12
HDAC9-217ENST00000455069 KIF16BQ96L93 1317 aa14.3□□□□□ -0.12
HDAC9-217ENST00000455069 ADAMTSL1Q8N6G6 1762 aa14.29□□□□□ -0.12
HDAC9-217ENST00000455069 WTIPA6NIX2 430 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-217ENST00000455069 HTRA3P83110 453 aa14.29□□□□□ -0.12
HDAC9-217ENST00000455069 LMBR1LQ6UX01 489 aa14.29□□□□□ -0.12
HDAC9-217ENST00000455069 SUPT20HQ8NEM7 779 aa14.29□□□□□ -0.12
HDAC9-217ENST00000455069 TBC1D16Q8TBP0 767 aa14.29□□□□□ -0.12
HDAC9-217ENST00000455069 BSDC1Q9NW68 430 aaPredicted RBP14.29□□□□□ -0.12
HDAC9-217ENST00000455069 PCNTO95613 3336 aa14.29□□□□□ -0.12
HDAC9-217ENST00000455069 TRIM27P14373 513 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 DPY19L2Q6NUT2 758 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 NIM1KQ8IY84 436 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 ANKRD44Q8N8A2 993 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 JDP2Q8WYK2 163 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 ARHGAP45Q92619 1136 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 L3MBTL3Q96JM7 780 aaPredicted RBP14.28□□□□□ -0.12
HDAC9-217ENST00000455069 API5Q9BZZ5 524 aaKnown RBP14.28□□□□□ -0.12
HDAC9-217ENST00000455069 VPS33BQ9H267 617 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 MINPP1Q9UNW1 487 aa14.28□□□□□ -0.12
HDAC9-217ENST00000455069 YDJCA8MPS7 323 aa14.27□□□□□ -0.13
HDAC9-217ENST00000455069 RABL6Q3YEC7 729 aaPredicted RBP14.27□□□□□ -0.13
HDAC9-217ENST00000455069 KLRG1Q96E93 195 aa14.27□□□□□ -0.13
HDAC9-217ENST00000455069 BICC1Q9H694 974 aaKnown RBP14.27□□□□□ -0.13
HDAC9-217ENST00000455069 XDHP47989 1333 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 ANKRD18BA2A2Z9 1011 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 C6orf229H3BNL8 230 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 UFL1O94874 794 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 IGHMBP2P38935 993 aaKnown RBP14.26□□□□□ -0.13
HDAC9-217ENST00000455069 CCT4P50991 539 aaKnown RBP14.26□□□□□ -0.13
HDAC9-217ENST00000455069 WASHC4Q2M389 1173 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 ZNF594Q96JF6 807 aaPredicted RBP14.26□□□□□ -0.13
HDAC9-217ENST00000455069 ANKIB1Q9P2G1 1089 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 GGA1Q9UJY5 639 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 CHMP3Q9Y3E7 222 aa14.26□□□□□ -0.13
HDAC9-217ENST00000455069 RIMBP2O15034 1052 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 EIF6P56537 245 aaKnown RBP14.25□□□□□ -0.13
HDAC9-217ENST00000455069 CXCL9Q07325 125 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 IFIT5Q13325 482 aaKnown RBP14.25□□□□□ -0.13
HDAC9-217ENST00000455069 INTS3Q68E01 1043 aaKnown RBP14.25□□□□□ -0.13
HDAC9-217ENST00000455069 ATF7IPQ6VMQ6 1270 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 GPC2Q8N158 579 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 JMYQ8N9B5 988 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 FRAT1Q92837 279 aaPredicted RBP14.25□□□□□ -0.13
HDAC9-217ENST00000455069 DBNDD1Q9H9R9 158 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 ZNRF3Q9ULT6 936 aa14.25□□□□□ -0.13
HDAC9-217ENST00000455069 POTEIP0CG38 1075 aa14.24□□□□□ -0.13
HDAC9-217ENST00000455069 POTEJP0CG39 1038 aa14.24□□□□□ -0.13
HDAC9-217ENST00000455069 SCNN1DP51172 638 aa14.24□□□□□ -0.13
HDAC9-217ENST00000455069 CHRNDQ07001 517 aa14.24□□□□□ -0.13
HDAC9-217ENST00000455069 MPHOSPH8Q99549 860 aa14.24□□□□□ -0.13
HDAC9-217ENST00000455069 MEIS3Q99687 375 aa14.24□□□□□ -0.13
HDAC9-217ENST00000455069 MED23Q9ULK4 1368 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 ECE2O60344 883 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 RAD17O75943 681 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 ATP2B4P23634 1241 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 KLRK1P26718 216 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 DOK7Q18PE1 504 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 CCDC57Q2TAC2 916 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 EYA3Q99504 573 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 TAF1DQ9H5J8 278 aaPredicted RBP14.23□□□□□ -0.13
HDAC9-217ENST00000455069 KCNQ5Q9NR82 932 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 GJA3Q9Y6H8 435 aa14.23□□□□□ -0.13
HDAC9-217ENST00000455069 IRS2Q9Y4H2 1338 aa14.22□□□□□ -0.13
HDAC9-217ENST00000455069 SNAP23O00161 211 aa14.22□□□□□ -0.13
HDAC9-217ENST00000455069 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
HDAC9-217ENST00000455069 TXNRD3Q86VQ6 643 aa14.22□□□□□ -0.13
HDAC9-217ENST00000455069 PUS3Q9BZE2 481 aaKnown RBP14.22□□□□□ -0.13
HDAC9-217ENST00000455069 IQCA1LA6NCM1 817 aa14.21□□□□□ -0.13
HDAC9-217ENST00000455069 TAF5LO75529 589 aa14.21□□□□□ -0.13
HDAC9-217ENST00000455069 UBTFL1P0CB47 393 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-217ENST00000455069 RFX5P48382 616 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-217ENST00000455069 ZKSCAN2Q63HK3 967 aa14.21□□□□□ -0.13
HDAC9-217ENST00000455069 CIAPIN1Q6FI81 312 aa14.21□□□□□ -0.13
HDAC9-217ENST00000455069 HELBQ8NG08 1087 aaPredicted RBP14.21□□□□□ -0.13
HDAC9-217ENST00000455069 KLHDC4Q8TBB5 520 aa14.21□□□□□ -0.13
HDAC9-217ENST00000455069 ZC3H12CQ9C0D7 883 aaKnown RBP14.21□□□□□ -0.13
HDAC9-217ENST00000455069 ZNF804BA4D1E1 1349 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 PSMD14O00487 310 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 RLBP1P12271 317 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 EPHX2P34913 555 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 EPS15P42566 896 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 GMPSP49915 693 aaPredicted RBP14.2□□□□□ -0.14
HDAC9-217ENST00000455069 LDHAL6AQ6ZMR3 332 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 ANKRD2Q9GZV1 360 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 HACL1Q9UJ83 578 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 LEMD3Q9Y2U8 911 aa14.2□□□□□ -0.14
HDAC9-217ENST00000455069 LRRFIP2Q9Y608 721 aaKnown RBP14.2□□□□□ -0.14
HDAC9-217ENST00000455069 SHTN1A0MZ66 631 aa14.19□□□□□ -0.14
HDAC9-217ENST00000455069 C1QBPQ07021 282 aaKnown RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms