RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 NSFL1CQ9UNZ2 370 aaKnown RBP10.41□□□□□ -0.74
NIF3L1-209ENST00000454952 DUOX1Q9NRD9 1551 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 C6orf229H3BNL8 230 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 PITPNM1O00562 1244 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 FMR1Q06787 632 aaKnown RBP eCLIP10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 GOLGA2Q08379 1002 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 SLC51AQ86UW1 340 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 TRPM4Q8TD43 1214 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 ZNF408Q9H9D4 720 aa10.4□□□□□ -0.74
NIF3L1-209ENST00000454952 POLR2AP24928 1970 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 G3V3G9 751 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 IRS4O14654 1257 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 HIRAP54198 1017 aaPredicted RBP10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 RPS8P62241 208 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 DCAF8Q5TAQ9 597 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 DUSP27Q5VZP5 1158 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 KRT26Q7Z3Y9 468 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 CCDC146Q8IYE0 955 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 DCPSQ96C86 337 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 FAM89AQ96GI7 184 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 ZC3H12CQ9C0D7 883 aaKnown RBP10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
NIF3L1-209ENST00000454952 CASP8AP2Q9UKL3 1982 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 ATP5J2-PTCD1G3V325 749 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 PSMD14O00487 310 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 ECE2O60344 883 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 AOC2O75106 756 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 HUNKP57058 714 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 KRT24Q2M2I5 525 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 RIC3Q7Z5B4 369 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 USP48Q86UV5 1035 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 C2orf69Q8N8R5 385 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 ZBTB38Q8NAP3 1195 aaPredicted RBP10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 CELF1Q92879 486 aaKnown RBP10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 CCDC102AQ96A19 550 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 DBNDD1Q9H9R9 158 aa10.38□□□□□ -0.75
NIF3L1-209ENST00000454952 AKAP11Q9UKA4 1901 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 CCDC85CA6NKD9 419 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 RIMBP2O15034 1052 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 DDX58O95786 925 aaKnown RBP10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 FXR2P51116 673 aaKnown RBP eCLIP10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 GNAI1P63096 354 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 GPSM2P81274 684 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 CCDC152Q4G0S7 254 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 CCDC191Q8NCU4 936 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 TBC1D16Q8TBP0 767 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 GBA2Q9HCG7 927 aaPredicted RBP10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 IFT57Q9NWB7 429 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 SAGE1Q9NXZ1 904 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 PODXL2Q9NZ53 605 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 ANKIB1Q9P2G1 1089 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 POLLQ9UGP5 575 aa10.37□□□□□ -0.75
NIF3L1-209ENST00000454952 ZNF609O15014 1411 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 RGS19P49795 217 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 MLLT1Q03111 559 aaPredicted RBP10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 KIF4BQ2VIQ3 1234 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 TBC1D10BQ4KMP7 808 aaPredicted RBP10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 RGMBQ6NW40 437 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 AGBL3Q8NEM8 1001 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 MBIPQ9NS73 344 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 GGA1Q9UJY5 639 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 ADAMTS8Q9UP79 889 aa10.36□□□□□ -0.75
NIF3L1-209ENST00000454952 PSME4Q14997 1843 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 PDE8AO60658 829 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 UFL1O94874 794 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 PCCAP05165 728 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 VIL1P09327 827 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 EVX2Q03828 476 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 DDX10Q13206 875 aaKnown RBP10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 DOK7Q18PE1 504 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 FAM161AQ3B820 660 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 CWC25Q9NXE8 425 aaPredicted RBP10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
NIF3L1-209ENST00000454952 XDHP47989 1333 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 SCN9AQ15858 1988 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 SHTN1A0MZ66 631 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 ZNF853P0CG23 659 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 ZNF157P51786 506 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 FKBP1BP68106 108 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 RTL5Q5HYW3 569 aaPredicted RBP10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 RBM26Q5T8P6 1007 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 CCDC30Q5VVM6 783 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 ANKRD18AQ8IVF6 992 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 CDC5LQ99459 802 aaKnown RBP10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 MCOLN1Q9GZU1 580 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 MYH3P11055 1940 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 RTL9Q8NET4 1388 aa10.34□□□□□ -0.75
NIF3L1-209ENST00000454952 ATP2B4P23634 1241 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 MMP14P50281 582 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 ZNF280AP59817 542 aaPredicted RBP10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 DGKZQ13574 1117 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 RSBN1LQ6PCB5 846 aaPredicted RBP10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 PODNQ7Z5L7 613 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 ZNF428Q96B54 188 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 MYD88Q99836 296 aa10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 METTL22Q9BUU2 404 aaPredicted RBP10.33□□□□□ -0.76
NIF3L1-209ENST00000454952 GGA3Q9NZ52 723 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms