RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 PUS3Q9BZE2 481 aaKnown RBP13.92□□□□□ -0.18
TRAF4-206ENST00000454852 SPEF2Q9C093 1822 aa13.92□□□□□ -0.18
TRAF4-206ENST00000454852 LTBP1Q14766 1721 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 DPEP1P16444 411 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 CHRNA5P30532 468 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 SP8Q8IXZ3 490 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 LRRCC1Q9C099 1032 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 CNNM1Q9NRU3 951 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 ATP6V0A2Q9Y487 856 aa13.91□□□□□ -0.18
TRAF4-206ENST00000454852 SNED1Q8TER0 1413 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 GRIPAP1Q4V328 841 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 C7orf43Q8WVR3 580 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 ANKRD2Q9GZV1 360 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 SIL1Q9H173 461 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 MINPP1Q9UNW1 487 aa13.9□□□□□ -0.18
TRAF4-206ENST00000454852 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-206ENST00000454852 PDE8BO95263 885 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 CHRNDQ07001 517 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 OS9Q13438 667 aaPredicted RBP13.89□□□□□ -0.19
TRAF4-206ENST00000454852 CHD1LQ86WJ1 897 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 TTLL6Q8N841 843 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 PODXL2Q9NZ53 605 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 PIM2Q9P1W9 311 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 CEP126Q9P2H0 1117 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 SLX4Q8IY92 1834 aa13.89□□□□□ -0.19
TRAF4-206ENST00000454852 ARAP2Q8WZ64 1704 aa13.88□□□□□ -0.19
TRAF4-206ENST00000454852 A0A0G2JLW4 131 aa13.88□□□□□ -0.19
TRAF4-206ENST00000454852 ZBTB22O15209 634 aa13.88□□□□□ -0.19
TRAF4-206ENST00000454852 FGFR2P21802 821 aa13.88□□□□□ -0.19
TRAF4-206ENST00000454852 PRPF40BQ6NWY9 871 aaKnown RBP13.88□□□□□ -0.19
TRAF4-206ENST00000454852 ZNF622Q969S3 477 aaKnown RBP eCLIP13.88□□□□□ -0.19
TRAF4-206ENST00000454852 AKAP2Q9Y2D5 859 aa13.88□□□□□ -0.19
TRAF4-206ENST00000454852 ZNF609O15014 1411 aa13.88□□□□□ -0.19
TRAF4-206ENST00000454852 TFCP2Q12800 502 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 UBE4AQ14139 1066 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 METTL24Q5JXM2 366 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 ANKRD45Q5TZF3 282 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
TRAF4-206ENST00000454852 FHDC1Q9C0D6 1143 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-206ENST00000454852 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.87□□□□□ -0.19
TRAF4-206ENST00000454852 XDHP47989 1333 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 SALL3Q9BXA9 1300 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 CACNA1SQ13698 1873 aa13.87□□□□□ -0.19
TRAF4-206ENST00000454852 ARFGEF1Q9Y6D6 1849 aa13.86□□□□□ -0.19
TRAF4-206ENST00000454852 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
TRAF4-206ENST00000454852 TNNI3KQ59H18 835 aa13.86□□□□□ -0.19
TRAF4-206ENST00000454852 SOGA3Q5TF21 947 aa13.86□□□□□ -0.19
TRAF4-206ENST00000454852 C15orf52Q6ZUT6 534 aaKnown RBP13.86□□□□□ -0.19
TRAF4-206ENST00000454852 LPIN2Q92539 896 aa13.86□□□□□ -0.19
TRAF4-206ENST00000454852 EAF2Q96CJ1 260 aaPredicted RBP13.86□□□□□ -0.19
TRAF4-206ENST00000454852 LEMD3Q9Y2U8 911 aa13.86□□□□□ -0.19
TRAF4-206ENST00000454852 FPGT-TNNI3KV9GXZ4 949 aa13.86□□□□□ -0.19
TRAF4-206ENST00000454852 DUOX1Q9NRD9 1551 aa13.85□□□□□ -0.19
TRAF4-206ENST00000454852 DALRD3Q5D0E6 543 aaKnown RBP13.85□□□□□ -0.19
TRAF4-206ENST00000454852 SYT17Q9BSW7 474 aa13.85□□□□□ -0.19
TRAF4-206ENST00000454852 RTFDC1Q9BY42 306 aaPredicted RBP13.85□□□□□ -0.19
TRAF4-206ENST00000454852 IRS2Q9Y4H2 1338 aa13.85□□□□□ -0.19
TRAF4-206ENST00000454852 A0A1B0GUL7 405 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 SMARCA5O60264 1052 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-206ENST00000454852 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 ATP2B3Q16720 1220 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 NLGN2Q8NFZ4 835 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 LNPKQ9C0E8 428 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 TMX4Q9H1E5 349 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-206ENST00000454852 OSBPL3Q9H4L5 887 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 IL1RAPL2Q9NP60 686 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 ZBTB47Q9UFB7 747 aaPredicted RBP13.84□□□□□ -0.19
TRAF4-206ENST00000454852 STAP2Q9UGK3 403 aa13.84□□□□□ -0.19
TRAF4-206ENST00000454852 TAF5LO75529 589 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 PDE4AP27815 886 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 GPSM2P81274 684 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 RTKN2Q8IZC4 609 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 ZNF512BQ96KM6 892 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-206ENST00000454852 PPP1R1BQ9UD71 204 aaPredicted RBP13.83□□□□□ -0.2
TRAF4-206ENST00000454852 ZNF804BA4D1E1 1349 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 AOX1Q06278 1338 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
TRAF4-206ENST00000454852 APBB1O00213 710 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 IFIT1P09914 478 aaKnown RBP13.82□□□□□ -0.2
TRAF4-206ENST00000454852 SLC5A1P13866 664 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 CCDC93Q567U6 631 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 AACSQ86V21 672 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 MPNDQ8N594 471 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 HELBQ8NG08 1087 aaPredicted RBP13.82□□□□□ -0.2
TRAF4-206ENST00000454852 TBC1D16Q8TBP0 767 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 PSMD1Q99460 953 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 ANKIB1Q9P2G1 1089 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 DBNLQ9UJU6 430 aaKnown RBP13.82□□□□□ -0.2
TRAF4-206ENST00000454852 GGA1Q9UJY5 639 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 NSFL1CQ9UNZ2 370 aaKnown RBP13.82□□□□□ -0.2
TRAF4-206ENST00000454852 TTC41PQ6P2S7 1318 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 FER1L6Q2WGJ9 1857 aa13.82□□□□□ -0.2
TRAF4-206ENST00000454852 IFIT2P09913 472 aaKnown RBP13.81□□□□□ -0.2
TRAF4-206ENST00000454852 TIMM10P62072 90 aa13.81□□□□□ -0.2
TRAF4-206ENST00000454852 PLEKHM2Q8IWE5 1019 aa13.81□□□□□ -0.2
TRAF4-206ENST00000454852 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
TRAF4-206ENST00000454852 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.81□□□□□ -0.2
TRAF4-206ENST00000454852 XAGE2Q96GT9 111 aa13.81□□□□□ -0.2
TRAF4-206ENST00000454852 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.4 ms