RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
CLCN4-204ENST00000454850 FAM89AQ96GI7 184 aa12.98□□□□□ -0.33
CLCN4-204ENST00000454850 CSRNP1Q96S65 589 aa12.98□□□□□ -0.33
CLCN4-204ENST00000454850 PAPPA2Q9BXP8 1791 aa12.98□□□□□ -0.33
CLCN4-204ENST00000454850 G3V3G9 751 aa12.97□□□□□ -0.33
CLCN4-204ENST00000454850 RIPK4P57078 832 aa12.97□□□□□ -0.33
CLCN4-204ENST00000454850 DCAF8Q5TAQ9 597 aa12.97□□□□□ -0.33
CLCN4-204ENST00000454850 PRPF38BQ5VTL8 546 aaKnown RBP12.97□□□□□ -0.33
CLCN4-204ENST00000454850 EYA3Q99504 573 aa12.97□□□□□ -0.33
CLCN4-204ENST00000454850 ATP5J2-PTCD1G3V325 749 aa12.96□□□□□ -0.33
CLCN4-204ENST00000454850 KRT24Q2M2I5 525 aa12.96□□□□□ -0.33
CLCN4-204ENST00000454850 ANGEL2Q5VTE6 544 aaKnown RBP12.96□□□□□ -0.33
CLCN4-204ENST00000454850 RASAL3Q86YV0 1011 aa12.96□□□□□ -0.33
CLCN4-204ENST00000454850 TBC1D16Q8TBP0 767 aa12.96□□□□□ -0.33
CLCN4-204ENST00000454850 PNNQ9H307 717 aaKnown RBP12.96□□□□□ -0.33
CLCN4-204ENST00000454850 CHPF2Q9P2E5 772 aa12.96□□□□□ -0.33
CLCN4-204ENST00000454850 ZC3H12CQ9C0D7 883 aaKnown RBP12.95□□□□□ -0.34
CLCN4-204ENST00000454850 SCAF8Q9UPN6 1271 aaKnown RBP12.95□□□□□ -0.34
CLCN4-204ENST00000454850 HPS5Q9UPZ3 1129 aa12.95□□□□□ -0.34
CLCN4-204ENST00000454850 MKI67P46013 3256 aaKnown RBP12.94□□□□□ -0.34
CLCN4-204ENST00000454850 UFL1O94874 794 aa12.94□□□□□ -0.34
CLCN4-204ENST00000454850 VIL1P09327 827 aaKnown RBP12.94□□□□□ -0.34
CLCN4-204ENST00000454850 SCARF1Q14162 830 aa12.94□□□□□ -0.34
CLCN4-204ENST00000454850 SF3B3Q15393 1217 aaKnown RBP12.94□□□□□ -0.34
CLCN4-204ENST00000454850 MOB2Q70IA6 237 aa12.94□□□□□ -0.34
CLCN4-204ENST00000454850 HDAC9Q9UKV0 1011 aa12.94□□□□□ -0.34
CLCN4-204ENST00000454850 LAS1LQ9Y4W2 734 aaKnown RBP12.94□□□□□ -0.34
CLCN4-204ENST00000454850 CENPFP49454 3210 aa12.94□□□□□ -0.34
CLCN4-204ENST00000454850 IRS4O14654 1257 aaPredicted RBP12.93□□□□□ -0.34
CLCN4-204ENST00000454850 TBC1D8O95759 1140 aa12.93□□□□□ -0.34
CLCN4-204ENST00000454850 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
CLCN4-204ENST00000454850 PLBD2Q8NHP8 589 aa12.93□□□□□ -0.34
CLCN4-204ENST00000454850 ANKIB1Q9P2G1 1089 aa12.93□□□□□ -0.34
CLCN4-204ENST00000454850 MYH3P11055 1940 aa12.93□□□□□ -0.34
CLCN4-204ENST00000454850 HTTP42858 3142 aa12.93□□□□□ -0.34
CLCN4-204ENST00000454850 TMPOP42166 694 aaKnown RBP12.92□□□□□ -0.34
CLCN4-204ENST00000454850 RPS8P62241 208 aaKnown RBP12.92□□□□□ -0.34
CLCN4-204ENST00000454850 LMOD3Q0VAK6 560 aa12.92□□□□□ -0.34
CLCN4-204ENST00000454850 NEUROD2Q15784 382 aa12.92□□□□□ -0.34
CLCN4-204ENST00000454850 ANKRD13DQ6ZTN6 518 aa12.92□□□□□ -0.34
CLCN4-204ENST00000454850 ZNF296Q8WUU4 475 aaPredicted RBP12.92□□□□□ -0.34
CLCN4-204ENST00000454850 ISCA1Q9BUE6 129 aa12.92□□□□□ -0.34
CLCN4-204ENST00000454850 SEC31BQ9NQW1 1179 aa12.92□□□□□ -0.34
CLCN4-204ENST00000454850 BABAM1Q9NWV8 329 aa12.92□□□□□ -0.34
CLCN4-204ENST00000454850 ZNF646O15015 1829 aaPredicted RBP12.92□□□□□ -0.34
CLCN4-204ENST00000454850 KIAA0100Q14667 2235 aaKnown RBP12.91□□□□□ -0.34
CLCN4-204ENST00000454850 UBE2Q2LH0YL09 131 aa12.91□□□□□ -0.34
CLCN4-204ENST00000454850 MKRN3Q13064 507 aaKnown RBP12.91□□□□□ -0.34
CLCN4-204ENST00000454850 TTLL12Q14166 644 aaPredicted RBP12.91□□□□□ -0.34
CLCN4-204ENST00000454850 PRAMEF18Q5VWM3 479 aa12.91□□□□□ -0.34
CLCN4-204ENST00000454850 RSBN1LQ6PCB5 846 aaPredicted RBP12.91□□□□□ -0.34
CLCN4-204ENST00000454850 REM2Q8IYK8 340 aaPredicted RBP12.91□□□□□ -0.34
CLCN4-204ENST00000454850 MYOZ2Q9NPC6 264 aa12.91□□□□□ -0.34
CLCN4-204ENST00000454850 GGA1Q9UJY5 639 aa12.91□□□□□ -0.34
CLCN4-204ENST00000454850 ZNF280AP59817 542 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-204ENST00000454850 FKBP1BP68106 108 aa12.9□□□□□ -0.34
CLCN4-204ENST00000454850 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
CLCN4-204ENST00000454850 AGBL3Q8NEM8 1001 aa12.9□□□□□ -0.34
CLCN4-204ENST00000454850 CCDC85AQ96PX6 553 aaPredicted RBP12.9□□□□□ -0.34
CLCN4-204ENST00000454850 PODXL2Q9NZ53 605 aa12.9□□□□□ -0.34
CLCN4-204ENST00000454850 USP17L8P0C7I0 530 aa12.89□□□□□ -0.35
CLCN4-204ENST00000454850 PKN2Q16513 984 aaKnown RBP12.89□□□□□ -0.35
CLCN4-204ENST00000454850 ZNF609O15014 1411 aa12.88□□□□□ -0.35
CLCN4-204ENST00000454850 CHL1O00533 1208 aa12.88□□□□□ -0.35
CLCN4-204ENST00000454850 JARID2Q92833 1246 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-204ENST00000454850 FBXW7Q969H0 707 aa12.88□□□□□ -0.35
CLCN4-204ENST00000454850 DBF4Q9UBU7 674 aaPredicted RBP12.88□□□□□ -0.35
CLCN4-204ENST00000454850 CEP290O15078 2479 aa12.88□□□□□ -0.35
CLCN4-204ENST00000454850 PITPNM2Q9BZ72 1349 aa12.88□□□□□ -0.35
CLCN4-204ENST00000454850 USP17L3A6NCW0 530 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 USP17L4A6NCW7 530 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 GPR25O00155 361 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 NBPF9Q3BBW0 867 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 USP17L1Q7RTZ2 530 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 GMLQ99445 158 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
CLCN4-204ENST00000454850 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.87□□□□□ -0.35
CLCN4-204ENST00000454850 BRCA2P51587 3418 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 PRKG1Q13976 671 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 CCDC152Q4G0S7 254 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 FBXO46Q6PJ61 603 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-204ENST00000454850 RIC3Q7Z5B4 369 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 ZBTB38Q8NAP3 1195 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-204ENST00000454850 MYD88Q99836 296 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 MXD3Q9BW11 206 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 XDHP47989 1333 aa12.86□□□□□ -0.35
CLCN4-204ENST00000454850 ECM29Q5VYK3 1845 aa12.85□□□□□ -0.35
CLCN4-204ENST00000454850 NF2P35240 595 aa12.85□□□□□ -0.35
CLCN4-204ENST00000454850 TRIM28Q13263 835 aaKnown RBP12.85□□□□□ -0.35
CLCN4-204ENST00000454850 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
CLCN4-204ENST00000454850 ANKRD18AQ8IVF6 992 aa12.85□□□□□ -0.35
CLCN4-204ENST00000454850 R3HDMLQ9H3Y0 253 aa12.85□□□□□ -0.35
CLCN4-204ENST00000454850 RBBP6Q7Z6E9 1792 aaKnown RBP12.84□□□□□ -0.35
CLCN4-204ENST00000454850 WTIPA6NIX2 430 aaPredicted RBP12.84□□□□□ -0.35
CLCN4-204ENST00000454850 PDE8AO60658 829 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 FKTNO75072 461 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 SASH1O94885 1247 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 HOXB7P09629 217 aa12.84□□□□□ -0.35
CLCN4-204ENST00000454850 HSP90B1P14625 803 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms