RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 LMNB1P20700 586 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 ATP2B4P23634 1241 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 RFX5P48382 616 aaPredicted RBP18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 PTPN12Q05209 780 aaKnown RBP18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 RTFDC1Q9BY42 306 aaPredicted RBP18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 VPS33BQ9H267 617 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 PODXL2Q9NZ53 605 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 GGA1Q9UJY5 639 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 XDHP47989 1333 aa18.19■□□□□ 0.5
NCKIPSD-207ENST00000453349 CHRNDQ07001 517 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 SLC51AQ86UW1 340 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 RPAP2Q8IXW5 612 aaPredicted RBP18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 KLHDC4Q8TBB5 520 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 CRBNQ96SW2 442 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 EYA3Q99504 573 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 PUS3Q9BZE2 481 aaKnown RBP18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 ZNF277Q9NRM2 450 aaPredicted RBP18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 FBXO3Q9UK99 471 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 FER1L6Q2WGJ9 1857 aa18.18■□□□□ 0.5
NCKIPSD-207ENST00000453349 PNMA6EA0A0J9YXQ4 647 aa18.17■□□□□ 0.5
NCKIPSD-207ENST00000453349 C9orf131Q5VYM1 1079 aa18.17■□□□□ 0.5
NCKIPSD-207ENST00000453349 RNF181Q9P0P0 153 aa18.17■□□□□ 0.5
NCKIPSD-207ENST00000453349 LEMD3Q9Y2U8 911 aa18.17■□□□□ 0.5
NCKIPSD-207ENST00000453349 RIPOR2Q9Y4F9 1068 aa18.17■□□□□ 0.5
NCKIPSD-207ENST00000453349 MROH5Q6ZUA9 1318 aa18.17■□□□□ 0.5
NCKIPSD-207ENST00000453349 SPEF2Q9C093 1822 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 LRRC37AA6NMS7 1700 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 EYA2O00167 538 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 UFL1O94874 794 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 IARSP41252 1262 aaKnown RBP18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 KCNJ4P48050 445 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 WASHC4Q2M389 1173 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 LRRC24Q50LG9 513 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 CEP85Q6P2H3 762 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 TBC1D16Q8TBP0 767 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 ZC3H12CQ9C0D7 883 aaKnown RBP18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 SIL1Q9H173 461 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 COPRSQ9NQ92 184 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
NCKIPSD-207ENST00000453349 SNED1Q8TER0 1413 aa18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 CIAO1O76071 339 aa18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 POLA2Q14181 598 aa18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 METTL24Q5JXM2 366 aa18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 HELBQ8NG08 1087 aaPredicted RBP18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 SSH3Q8TE77 659 aa18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 PA2G4Q9UQ80 394 aaKnown RBP18.15■□□□□ 0.5
NCKIPSD-207ENST00000453349 G3V3G9 751 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 PPIP5K2O43314 1243 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 HMMRO75330 724 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 TAF5LO75529 589 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 G3BP1Q13283 466 aaKnown RBP eCLIP18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 DCAF8Q5TAQ9 597 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 LARGE2Q8N3Y3 721 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 JDP2Q8WYK2 163 aa18.14■□□□□ 0.49
NCKIPSD-207ENST00000453349 IL15P40933 162 aaPredicted RBP18.13■□□□□ 0.49
NCKIPSD-207ENST00000453349 PRELPP51888 382 aa18.13■□□□□ 0.49
NCKIPSD-207ENST00000453349 AAMPQ13685 434 aa18.13■□□□□ 0.49
NCKIPSD-207ENST00000453349 AOC3Q16853 763 aa18.13■□□□□ 0.49
NCKIPSD-207ENST00000453349 ZNF804BA4D1E1 1349 aa18.13■□□□□ 0.49
NCKIPSD-207ENST00000453349 SURF6O75683 361 aaKnown RBP18.12■□□□□ 0.49
NCKIPSD-207ENST00000453349 KIAA2012Q0VF49 1180 aa18.12■□□□□ 0.49
NCKIPSD-207ENST00000453349 ATG9AQ7Z3C6 839 aa18.12■□□□□ 0.49
NCKIPSD-207ENST00000453349 CEP126Q9P2H0 1117 aa18.12■□□□□ 0.49
NCKIPSD-207ENST00000453349 PDE8BO95263 885 aa18.11■□□□□ 0.49
NCKIPSD-207ENST00000453349 UBE4AQ14139 1066 aa18.11■□□□□ 0.49
NCKIPSD-207ENST00000453349 NIM1KQ8IY84 436 aa18.11■□□□□ 0.49
NCKIPSD-207ENST00000453349 SBF1O95248 1867 aa18.1■□□□□ 0.49
NCKIPSD-207ENST00000453349 OS9Q13438 667 aaPredicted RBP18.1■□□□□ 0.49
NCKIPSD-207ENST00000453349 CHD4Q14839 1912 aa18.1■□□□□ 0.49
NCKIPSD-207ENST00000453349 CCDC88AQ3V6T2 1871 aa18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 ZC3H4Q9UPT8 1303 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 WTIPA6NIX2 430 aaPredicted RBP18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 YY1P25490 414 aa18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 HSP90AB4PQ58FF6 505 aa18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 DPY19L2Q6NUT2 758 aa18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 EXOC6Q8TAG9 804 aa18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 GPR101Q96P66 508 aaPredicted RBP18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 NOP58Q9Y2X3 529 aaKnown RBP18.09■□□□□ 0.49
NCKIPSD-207ENST00000453349 MED23Q9ULK4 1368 aa18.08■□□□□ 0.49
NCKIPSD-207ENST00000453349 EIF6P56537 245 aaKnown RBP18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 IRX6P78412 446 aaPredicted RBP18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 DOK7Q18PE1 504 aa18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 SIRT2Q8IXJ6 389 aa18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 ZNRF3Q9ULT6 936 aa18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 AKAP2Q9Y2D5 859 aa18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 DUOX1Q9NRD9 1551 aa18.08■□□□□ 0.48
NCKIPSD-207ENST00000453349 LTBP1Q14766 1721 aa18.07■□□□□ 0.48
NCKIPSD-207ENST00000453349 SNAP23O00161 211 aa18.07■□□□□ 0.48
NCKIPSD-207ENST00000453349 IFIT1P09914 478 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-207ENST00000453349 PUM3Q15397 648 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-207ENST00000453349 C15orf52Q6ZUT6 534 aaKnown RBP18.07■□□□□ 0.48
NCKIPSD-207ENST00000453349 VGLL2Q8N8G2 317 aa18.07■□□□□ 0.48
NCKIPSD-207ENST00000453349 FZD9O00144 591 aa18.06■□□□□ 0.48
NCKIPSD-207ENST00000453349 ECE2O60344 883 aa18.06■□□□□ 0.48
NCKIPSD-207ENST00000453349 SLC5A1P13866 664 aa18.06■□□□□ 0.48
NCKIPSD-207ENST00000453349 TFCP2Q12800 502 aa18.06■□□□□ 0.48
NCKIPSD-207ENST00000453349 CAVIN4Q5BKX8 364 aa18.06■□□□□ 0.48
NCKIPSD-207ENST00000453349 ERC1Q8IUD2 1116 aa18.06■□□□□ 0.48
NCKIPSD-207ENST00000453349 LPIN2Q92539 896 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms