RNA–Protein interactions for RNA: ENST00000453341.1

TNFRSF25-208, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-208ENST00000453341 CTU1Q7Z7A3 348 aaKnown RBP28.51■■■□□ 2.15
TNFRSF25-208ENST00000453341 FAM89AQ96GI7 184 aa28.51■■■□□ 2.15
TNFRSF25-208ENST00000453341 PNNQ9H307 717 aaKnown RBP28.51■■■□□ 2.15
TNFRSF25-208ENST00000453341 CDCA5Q96FF9 252 aa28.5■■■□□ 2.15
TNFRSF25-208ENST00000453341 SULF1Q8IWU6 871 aa28.49■■■□□ 2.15
TNFRSF25-208ENST00000453341 TBC1D16Q8TBP0 767 aa28.49■■■□□ 2.15
TNFRSF25-208ENST00000453341 ISCA1Q9BUE6 129 aa28.49■■■□□ 2.15
TNFRSF25-208ENST00000453341 VIL1P09327 827 aaKnown RBP28.48■■■□□ 2.15
TNFRSF25-208ENST00000453341 RASAL3Q86YV0 1011 aa28.48■■■□□ 2.15
TNFRSF25-208ENST00000453341 EYA3Q99504 573 aa28.48■■■□□ 2.15
TNFRSF25-208ENST00000453341 CHPF2Q9P2E5 772 aa28.48■■■□□ 2.15
TNFRSF25-208ENST00000453341 ATP5J2-PTCD1G3V325 749 aa28.46■■■□□ 2.15
TNFRSF25-208ENST00000453341 RTL5Q5HYW3 569 aaPredicted RBP28.46■■■□□ 2.15
TNFRSF25-208ENST00000453341 PRPF38BQ5VTL8 546 aaKnown RBP28.46■■■□□ 2.15
TNFRSF25-208ENST00000453341 PLBD2Q8NHP8 589 aa28.46■■■□□ 2.15
TNFRSF25-208ENST00000453341 TMPOP42166 694 aaKnown RBP28.44■■■□□ 2.14
TNFRSF25-208ENST00000453341 ANGEL2Q5VTE6 544 aaKnown RBP28.44■■■□□ 2.14
TNFRSF25-208ENST00000453341 HPS5Q9UPZ3 1129 aa28.44■■■□□ 2.14
TNFRSF25-208ENST00000453341 ZNF280AP59817 542 aaPredicted RBP28.43■■■□□ 2.14
TNFRSF25-208ENST00000453341 RPS8P62241 208 aaKnown RBP28.43■■■□□ 2.14
TNFRSF25-208ENST00000453341 ANKRD13DQ6ZTN6 518 aa28.43■■■□□ 2.14
TNFRSF25-208ENST00000453341 PAPPA2Q9BXP8 1791 aa28.42■■■□□ 2.14
TNFRSF25-208ENST00000453341 SCARF1Q14162 830 aa28.42■■■□□ 2.14
TNFRSF25-208ENST00000453341 ZC3H12CQ9C0D7 883 aaKnown RBP28.42■■■□□ 2.14
TNFRSF25-208ENST00000453341 PODXL2Q9NZ53 605 aa28.42■■■□□ 2.14
TNFRSF25-208ENST00000453341 PSME4Q14997 1843 aa28.41■■■□□ 2.14
TNFRSF25-208ENST00000453341 CHL1O00533 1208 aa28.41■■■□□ 2.14
TNFRSF25-208ENST00000453341 IRS4O14654 1257 aaPredicted RBP28.41■■■□□ 2.14
TNFRSF25-208ENST00000453341 ZNF609O15014 1411 aa28.41■■■□□ 2.14
TNFRSF25-208ENST00000453341 LMOD3Q0VAK6 560 aa28.4■■■□□ 2.14
TNFRSF25-208ENST00000453341 MOB2Q70IA6 237 aa28.4■■■□□ 2.14
TNFRSF25-208ENST00000453341 REM2Q8IYK8 340 aaPredicted RBP28.4■■■□□ 2.14
TNFRSF25-208ENST00000453341 SEC31BQ9NQW1 1179 aa28.4■■■□□ 2.14
TNFRSF25-208ENST00000453341 UFL1O94874 794 aa28.39■■■□□ 2.14
TNFRSF25-208ENST00000453341 HDGFL1Q5TGJ6 251 aa28.39■■■□□ 2.14
TNFRSF25-208ENST00000453341 RSBN1LQ6PCB5 846 aaPredicted RBP28.39■■■□□ 2.14
TNFRSF25-208ENST00000453341 FKBP1BP68106 108 aa28.38■■■□□ 2.13
TNFRSF25-208ENST00000453341 AGBL3Q8NEM8 1001 aa28.38■■■□□ 2.13
TNFRSF25-208ENST00000453341 SCAF8Q9UPN6 1271 aaKnown RBP28.38■■■□□ 2.13
TNFRSF25-208ENST00000453341 GMLQ99445 158 aa28.37■■■□□ 2.13
TNFRSF25-208ENST00000453341 TBC1D8O95759 1140 aa28.36■■■□□ 2.13
TNFRSF25-208ENST00000453341 TRIM28Q13263 835 aaKnown RBP28.36■■■□□ 2.13
TNFRSF25-208ENST00000453341 ZNF296Q8WUU4 475 aaPredicted RBP28.36■■■□□ 2.13
TNFRSF25-208ENST00000453341 ANKIB1Q9P2G1 1089 aa28.36■■■□□ 2.13
TNFRSF25-208ENST00000453341 DBF4Q9UBU7 674 aaPredicted RBP28.36■■■□□ 2.13
TNFRSF25-208ENST00000453341 G3V3G9 751 aa28.35■■■□□ 2.13
TNFRSF25-208ENST00000453341 DCAF8Q5TAQ9 597 aa28.35■■■□□ 2.13
TNFRSF25-208ENST00000453341 MYOZ2Q9NPC6 264 aa28.35■■■□□ 2.13
TNFRSF25-208ENST00000453341 GGA1Q9UJY5 639 aa28.35■■■□□ 2.13
TNFRSF25-208ENST00000453341 LAS1LQ9Y4W2 734 aaKnown RBP28.35■■■□□ 2.13
TNFRSF25-208ENST00000453341 NEUROD2Q15784 382 aa28.34■■■□□ 2.13
TNFRSF25-208ENST00000453341 PKN2Q16513 984 aaKnown RBP28.34■■■□□ 2.13
TNFRSF25-208ENST00000453341 PITPNM2Q9BZ72 1349 aa28.34■■■□□ 2.13
TNFRSF25-208ENST00000453341 UBE2Q2LH0YL09 131 aa28.33■■■□□ 2.13
TNFRSF25-208ENST00000453341 HDAC9Q9UKV0 1011 aa28.33■■■□□ 2.13
TNFRSF25-208ENST00000453341 HOXB7P09629 217 aa28.32■■■□□ 2.12
TNFRSF25-208ENST00000453341 USP17L8P0C7I0 530 aa28.32■■■□□ 2.12
TNFRSF25-208ENST00000453341 PRAMEF18Q5VWM3 479 aa28.32■■■□□ 2.12
TNFRSF25-208ENST00000453341 ZBTB38Q8NAP3 1195 aaPredicted RBP28.32■■■□□ 2.12
TNFRSF25-208ENST00000453341 TRIM35Q9UPQ4 493 aa28.32■■■□□ 2.12
TNFRSF25-208ENST00000453341 HTTP42858 3142 aa28.32■■■□□ 2.12
TNFRSF25-208ENST00000453341 CCDC146Q8IYE0 955 aa28.31■■■□□ 2.12
TNFRSF25-208ENST00000453341 HYPKQ9NX55 129 aa28.31■■■□□ 2.12
TNFRSF25-208ENST00000453341 MKI67P46013 3256 aaKnown RBP28.3■■■□□ 2.12
TNFRSF25-208ENST00000453341 TM4SF4P48230 202 aa28.28■■■□□ 2.12
TNFRSF25-208ENST00000453341 NBPF9Q3BBW0 867 aa28.28■■■□□ 2.12
TNFRSF25-208ENST00000453341 CCDC85AQ96PX6 553 aaPredicted RBP28.28■■■□□ 2.12
TNFRSF25-208ENST00000453341 ZNF646O15015 1829 aaPredicted RBP28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 USP17L3A6NCW0 530 aa28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 USP17L4A6NCW7 530 aa28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 WTIPA6NIX2 430 aaPredicted RBP28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 GPR25O00155 361 aa28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 DUSP27Q5VZP5 1158 aa28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 USP17L1Q7RTZ2 530 aa28.27■■■□□ 2.12
TNFRSF25-208ENST00000453341 XDHP47989 1333 aa28.26■■■□□ 2.11
TNFRSF25-208ENST00000453341 RIC3Q7Z5B4 369 aa28.26■■■□□ 2.11
TNFRSF25-208ENST00000453341 JARID2Q92833 1246 aaPredicted RBP28.26■■■□□ 2.11
TNFRSF25-208ENST00000453341 MKRN3Q13064 507 aaKnown RBP28.25■■■□□ 2.11
TNFRSF25-208ENST00000453341 CCDC152Q4G0S7 254 aa28.25■■■□□ 2.11
TNFRSF25-208ENST00000453341 NOM1Q5C9Z4 860 aaKnown RBP28.25■■■□□ 2.11
TNFRSF25-208ENST00000453341 FBXO46Q6PJ61 603 aaPredicted RBP28.25■■■□□ 2.11
TNFRSF25-208ENST00000453341 PODNQ7Z5L7 613 aa28.25■■■□□ 2.11
TNFRSF25-208ENST00000453341 MXD3Q9BW11 206 aa28.25■■■□□ 2.11
TNFRSF25-208ENST00000453341 MYD88Q99836 296 aa28.24■■■□□ 2.11
TNFRSF25-208ENST00000453341 R3HDMLQ9H3Y0 253 aa28.24■■■□□ 2.11
TNFRSF25-208ENST00000453341 PHAXQ9H814 394 aaKnown RBP28.24■■■□□ 2.11
TNFRSF25-208ENST00000453341 PDE8AO60658 829 aa28.23■■■□□ 2.11
TNFRSF25-208ENST00000453341 PCCAP05165 728 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF25-208ENST00000453341 ATP2B4P23634 1241 aa28.23■■■□□ 2.11
TNFRSF25-208ENST00000453341 TTLL12Q14166 644 aaPredicted RBP28.23■■■□□ 2.11
TNFRSF25-208ENST00000453341 CENPFP49454 3210 aa28.22■■■□□ 2.11
TNFRSF25-208ENST00000453341 GOLGA2Q08379 1002 aa28.22■■■□□ 2.11
TNFRSF25-208ENST00000453341 WNT10BO00744 389 aa28.21■■■□□ 2.11
TNFRSF25-208ENST00000453341 HSP90B1P14625 803 aaKnown RBP28.21■■■□□ 2.11
TNFRSF25-208ENST00000453341 DACT2Q5SW24 774 aa28.21■■■□□ 2.11
TNFRSF25-208ENST00000453341 ANKRD18AQ8IVF6 992 aa28.21■■■□□ 2.11
TNFRSF25-208ENST00000453341 CCDC191Q8NCU4 936 aa28.2■■■□□ 2.1
TNFRSF25-208ENST00000453341 CFHR5Q9BXR6 569 aa28.2■■■□□ 2.1
TNFRSF25-208ENST00000453341 MBIPQ9NS73 344 aa28.2■■■□□ 2.1
TNFRSF25-208ENST00000453341 FKTNO75072 461 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms