RNA–Protein interactions for RNA: ENST00000453007.1

SCN3A-205, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 1,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-205ENST00000453007 FAM229AH3BQW9 127 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 XYLBO75191 536 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 CPB1P15086 417 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 CHRNA4P43681 627 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 TRIM28Q13263 835 aaKnown RBP9.42□□□□□ -0.9
SCN3A-205ENST00000453007 SUZ12Q15022 739 aaKnown RBP9.42□□□□□ -0.9
SCN3A-205ENST00000453007 TRAPPC3LQ5T215 181 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 DHX32Q7L7V1 743 aaKnown RBP9.42□□□□□ -0.9
SCN3A-205ENST00000453007 FAM35AQ86V20 835 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 C11orf16Q9NQ32 467 aa9.42□□□□□ -0.9
SCN3A-205ENST00000453007 BIN2Q9UBW5 565 aaPredicted RBP9.42□□□□□ -0.9
SCN3A-205ENST00000453007 IGSF3O75054 1194 aa9.41□□□□□ -0.9
SCN3A-205ENST00000453007 RGS9O75916 674 aaPredicted RBP9.41□□□□□ -0.9
SCN3A-205ENST00000453007 MAP3K6O95382 1288 aa9.41□□□□□ -0.9
SCN3A-205ENST00000453007 APBA3O96018 575 aa9.41□□□□□ -0.9
SCN3A-205ENST00000453007 NID1P14543 1247 aa9.41□□□□□ -0.9
SCN3A-205ENST00000453007 MLLT1Q03111 559 aaPredicted RBP9.41□□□□□ -0.9
SCN3A-205ENST00000453007 ETFBKMTQ8IXQ9 262 aa9.41□□□□□ -0.9
SCN3A-205ENST00000453007 NAGPAQ9UK23 515 aa9.41□□□□□ -0.9
SCN3A-205ENST00000453007 ERCC3P19447 782 aa9.4□□□□□ -0.9
SCN3A-205ENST00000453007 COL9A3Q14050 684 aaPredicted RBP9.4□□□□□ -0.9
SCN3A-205ENST00000453007 ZNF608Q9ULD9 1512 aaPredicted RBP9.4□□□□□ -0.91
SCN3A-205ENST00000453007 BAG6P46379 1132 aa9.39□□□□□ -0.91
SCN3A-205ENST00000453007 ABL1P00519 1130 aa9.38□□□□□ -0.91
SCN3A-205ENST00000453007 ELMSAN1Q6PJG2 1045 aa9.38□□□□□ -0.91
SCN3A-205ENST00000453007 FAM13BQ9NYF5 915 aa9.38□□□□□ -0.91
SCN3A-205ENST00000453007 TOPBP1Q92547 1522 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 ZBTB42B2RXF5 422 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 TNFRSF10BO14763 440 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 EGFRP00533 1210 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 HFE2Q6ZVN8 426 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 TRPM4Q8TD43 1214 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 PIK3R5Q8WYR1 880 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 SEPT3Q9UH03 358 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 KCNMB2Q9Y691 235 aa9.37□□□□□ -0.91
SCN3A-205ENST00000453007 PSAPP07602 524 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 EIF2AK2P19525 551 aaKnown RBP9.36□□□□□ -0.91
SCN3A-205ENST00000453007 ZAP70P43403 619 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 AFF1P51825 1210 aaKnown RBP9.36□□□□□ -0.91
SCN3A-205ENST00000453007 RAC1P63000 192 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 GPLD1P80108 840 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 ZNF211Q13398 564 aaPredicted RBP9.36□□□□□ -0.91
SCN3A-205ENST00000453007 FAM26DQ5JW98 314 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 PERM1Q5SV97 790 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 GTF3C2Q8WUA4 911 aaPredicted RBP9.36□□□□□ -0.91
SCN3A-205ENST00000453007 NACC1Q96RE7 527 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 ANO2Q9NQ90 1003 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 TLR7Q9NYK1 1049 aaKnown RBP9.36□□□□□ -0.91
SCN3A-205ENST00000453007 STIM2Q9P246 746 aa9.36□□□□□ -0.91
SCN3A-205ENST00000453007 RAD54L2Q9Y4B4 1467 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 UBAP1LF5GYI3 381 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 GATA4P43694 442 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 NRLP54845 237 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 PLAURQ03405 335 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 GRIK4Q16099 956 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 ABTB2Q8N961 1025 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 LPIN3Q9BQK8 851 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 BCL2L13Q9BXK5 485 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 KIAA1522Q9P206 1035 aaPredicted RBP9.35□□□□□ -0.91
SCN3A-205ENST00000453007 EGFL7Q9UHF1 273 aa9.35□□□□□ -0.91
SCN3A-205ENST00000453007 ANKRD33BA6NCL7 494 aa9.34□□□□□ -0.91
SCN3A-205ENST00000453007 H3BRB1 525 aa9.34□□□□□ -0.91
SCN3A-205ENST00000453007 MMP20O60882 483 aa9.34□□□□□ -0.91
SCN3A-205ENST00000453007 FURINP09958 794 aa9.34□□□□□ -0.91
SCN3A-205ENST00000453007 ZNF16P17020 682 aaPredicted RBP9.34□□□□□ -0.91
SCN3A-205ENST00000453007 DMRTC2Q8IXT2 367 aaPredicted RBP9.34□□□□□ -0.91
SCN3A-205ENST00000453007 MRRFQ96E11 262 aaKnown RBP9.34□□□□□ -0.91
SCN3A-205ENST00000453007 TUT1Q9H6E5 874 aaKnown RBP9.34□□□□□ -0.91
SCN3A-205ENST00000453007 FRRS1LQ9P0K9 344 aa9.34□□□□□ -0.91
SCN3A-205ENST00000453007 A0A0A0MRY4 1105 aa9.33□□□□□ -0.92
SCN3A-205ENST00000453007 ADAM23O75077 832 aa9.33□□□□□ -0.92
SCN3A-205ENST00000453007 TRIP4Q15650 581 aaPredicted RBP9.33□□□□□ -0.92
SCN3A-205ENST00000453007 NLRP13Q86W25 1043 aa9.33□□□□□ -0.92
SCN3A-205ENST00000453007 GPR152Q8TDT2 470 aa9.33□□□□□ -0.92
SCN3A-205ENST00000453007 NSUN5Q96P11 429 aaKnown RBP9.33□□□□□ -0.92
SCN3A-205ENST00000453007 SMG9Q9H0W8 520 aaKnown RBP9.33□□□□□ -0.92
SCN3A-205ENST00000453007 FNDC3AQ9Y2H6 1198 aaKnown RBP9.33□□□□□ -0.92
SCN3A-205ENST00000453007 AQRO60306 1485 aaKnown RBP eCLIP9.33□□□□□ -0.92
SCN3A-205ENST00000453007 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 J3QW42 95 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 K7ELQ4 463 aaPredicted RBP9.32□□□□□ -0.92
SCN3A-205ENST00000453007 ICMTO60725 284 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 GHRHP01286 108 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 DOC2BQ14184 412 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 MSL1Q68DK7 614 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 NPAS4Q8IUM7 802 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 HELQQ8TDG4 1101 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 GIPC2Q8TF65 315 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 RBSNQ9H1K0 784 aa9.32□□□□□ -0.92
SCN3A-205ENST00000453007 CUX1P39880 1505 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 LOC102724428A0A0B4J2F2 783 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 ZBTB39O15060 712 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 SIK1P57059 783 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 FKBP4Q02790 459 aaKnown RBP eCLIP9.31□□□□□ -0.92
SCN3A-205ENST00000453007 SF3B2Q13435 895 aaKnown RBP9.31□□□□□ -0.92
SCN3A-205ENST00000453007 WFDC8Q8IUA0 241 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 GLYCTKQ8IVS8 523 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 IGSF5Q9NSI5 407 aa9.31□□□□□ -0.92
SCN3A-205ENST00000453007 TDRD9Q8NDG6 1382 aaKnown RBP9.31□□□□□ -0.92
SCN3A-205ENST00000453007 POLA1P09884 1462 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms