RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CFAP44Q96MT7 982 aa15.18■□□□□ 0.02
HERC3-207ENST00000452979 PODXL2Q9NZ53 605 aa15.18■□□□□ 0.02
HERC3-207ENST00000452979 SCN9AQ15858 1988 aa15.17■□□□□ 0.02
HERC3-207ENST00000452979 ZNF316A6NFI3 1004 aaPredicted RBP15.17■□□□□ 0.02
HERC3-207ENST00000452979 SLC34A2O95436 690 aa15.17■□□□□ 0.02
HERC3-207ENST00000452979 VIL1P09327 827 aaKnown RBP15.17■□□□□ 0.02
HERC3-207ENST00000452979 DOK7Q18PE1 504 aa15.17■□□□□ 0.02
HERC3-207ENST00000452979 KRT26Q7Z3Y9 468 aa15.17■□□□□ 0.02
HERC3-207ENST00000452979 CCDC102AQ96A19 550 aa15.17■□□□□ 0.02
HERC3-207ENST00000452979 DCPSQ96C86 337 aaKnown RBP15.17■□□□□ 0.02
HERC3-207ENST00000452979 DUSP27Q5VZP5 1158 aa15.16■□□□□ 0.02
HERC3-207ENST00000452979 C2orf69Q8N8R5 385 aa15.16■□□□□ 0.02
HERC3-207ENST00000452979 ZBTB38Q8NAP3 1195 aaPredicted RBP15.16■□□□□ 0.02
HERC3-207ENST00000452979 ZC3H12CQ9C0D7 883 aaKnown RBP15.16■□□□□ 0.02
HERC3-207ENST00000452979 GBA2Q9HCG7 927 aaPredicted RBP15.16■□□□□ 0.02
HERC3-207ENST00000452979 SAGE1Q9NXZ1 904 aa15.16■□□□□ 0.02
HERC3-207ENST00000452979 PSME4Q14997 1843 aa15.15■□□□□ 0.02
HERC3-207ENST00000452979 ADM5C9JUS6 153 aa15.15■□□□□ 0.02
HERC3-207ENST00000452979 ZNF853P0CG23 659 aa15.15■□□□□ 0.02
HERC3-207ENST00000452979 HSP90B1P14625 803 aaKnown RBP15.15■□□□□ 0.02
HERC3-207ENST00000452979 DGKZQ13574 1117 aa15.15■□□□□ 0.02
HERC3-207ENST00000452979 RTL5Q5HYW3 569 aaPredicted RBP15.15■□□□□ 0.02
HERC3-207ENST00000452979 ADAMTS8Q9UP79 889 aa15.15■□□□□ 0.02
HERC3-207ENST00000452979 ZNF609O15014 1411 aa15.15■□□□□ 0.02
HERC3-207ENST00000452979 AKAP11Q9UKA4 1901 aa15.14■□□□□ 0.01
HERC3-207ENST00000452979 KIF23Q02241 960 aaPredicted RBP15.14■□□□□ 0.01
HERC3-207ENST00000452979 RBM26Q5T8P6 1007 aaKnown RBP15.14■□□□□ 0.01
HERC3-207ENST00000452979 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
HERC3-207ENST00000452979 ZNF157P51786 506 aaPredicted RBP15.13■□□□□ 0.01
HERC3-207ENST00000452979 ZNF280AP59817 542 aaPredicted RBP15.13■□□□□ 0.01
HERC3-207ENST00000452979 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
HERC3-207ENST00000452979 KIF4BQ2VIQ3 1234 aa15.13■□□□□ 0.01
HERC3-207ENST00000452979 RIC3Q7Z5B4 369 aa15.13■□□□□ 0.01
HERC3-207ENST00000452979 CCDC191Q8NCU4 936 aa15.13■□□□□ 0.01
HERC3-207ENST00000452979 SEC31BQ9NQW1 1179 aa15.13■□□□□ 0.01
HERC3-207ENST00000452979 GOLGA2Q08379 1002 aa15.12■□□□□ 0.01
HERC3-207ENST00000452979 SULF1Q8IWU6 871 aa15.12■□□□□ 0.01
HERC3-207ENST00000452979 AGBL3Q8NEM8 1001 aa15.12■□□□□ 0.01
HERC3-207ENST00000452979 PHAXQ9H814 394 aaKnown RBP15.12■□□□□ 0.01
HERC3-207ENST00000452979 RNF186Q9NXI6 227 aa15.12■□□□□ 0.01
HERC3-207ENST00000452979 GGA1Q9UJY5 639 aa15.12■□□□□ 0.01
HERC3-207ENST00000452979 PDE8AO60658 829 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 UFL1O94874 794 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 PCCAP05165 728 aaPredicted RBP15.11■□□□□ 0.01
HERC3-207ENST00000452979 SLC10A3P09131 477 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 DDX10Q13206 875 aaKnown RBP15.11■□□□□ 0.01
HERC3-207ENST00000452979 CCDC152Q4G0S7 254 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 RSBN1LQ6PCB5 846 aaPredicted RBP15.11■□□□□ 0.01
HERC3-207ENST00000452979 REM2Q8IYK8 340 aaPredicted RBP15.11■□□□□ 0.01
HERC3-207ENST00000452979 CDCA5Q96FF9 252 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 CSRNP1Q96S65 589 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 GMLQ99445 158 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 ANKIB1Q9P2G1 1089 aa15.11■□□□□ 0.01
HERC3-207ENST00000452979 ASTN2O75129 1339 aaPredicted RBP15.11■□□□□ 0.01
HERC3-207ENST00000452979 G3V3G9 751 aa15.1■□□□□ 0.01
HERC3-207ENST00000452979 SCARF1Q14162 830 aa15.1■□□□□ 0.01
HERC3-207ENST00000452979 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
HERC3-207ENST00000452979 MYD88Q99836 296 aa15.1■□□□□ 0.01
HERC3-207ENST00000452979 IFT57Q9NWB7 429 aa15.1■□□□□ 0.01
HERC3-207ENST00000452979 GGA3Q9NZ52 723 aa15.1■□□□□ 0.01
HERC3-207ENST00000452979 TNRC18O15417 2968 aaPredicted RBP15.09■□□□□ 0.01
HERC3-207ENST00000452979 TRPA1O75762 1119 aa15.09■□□□□ 0.01
HERC3-207ENST00000452979 GNAI1P63096 354 aa15.09■□□□□ 0.01
HERC3-207ENST00000452979 FKBP1BP68106 108 aa15.09■□□□□ 0.01
HERC3-207ENST00000452979 PODNQ7Z5L7 613 aa15.09■□□□□ 0.01
HERC3-207ENST00000452979 CWC25Q9NXE8 425 aaPredicted RBP15.09■□□□□ 0.01
HERC3-207ENST00000452979 XDHP47989 1333 aa15.09■□□□□ 0.01
HERC3-207ENST00000452979 PITPNM2Q9BZ72 1349 aa15.09■□□□□ 0.01
HERC3-207ENST00000452979 USP17L8P0C7I0 530 aa15.08■□□□□ 0
HERC3-207ENST00000452979 ATP2B4P23634 1241 aa15.08■□□□□ 0
HERC3-207ENST00000452979 CALD1Q05682 793 aaKnown RBP15.08■□□□□ 0
HERC3-207ENST00000452979 ANGEL2Q5VTE6 544 aaKnown RBP15.08■□□□□ 0
HERC3-207ENST00000452979 METTL22Q9BUU2 404 aaPredicted RBP15.08■□□□□ 0
HERC3-207ENST00000452979 MYOZ2Q9NPC6 264 aa15.08■□□□□ 0
HERC3-207ENST00000452979 PAPPA2Q9BXP8 1791 aa15.07■□□□□ 0
HERC3-207ENST00000452979 ELL2O00472 640 aaPredicted RBP15.07■□□□□ 0
HERC3-207ENST00000452979 ANKRD18AQ8IVF6 992 aa15.07■□□□□ 0
HERC3-207ENST00000452979 C8orf58Q8NAV2 365 aa15.07■□□□□ 0
HERC3-207ENST00000452979 CHMP4AQ9BY43 222 aa15.07■□□□□ 0
HERC3-207ENST00000452979 ZNF646O15015 1829 aaPredicted RBP15.07■□□□□ 0
HERC3-207ENST00000452979 USP17L3A6NCW0 530 aa15.06■□□□□ 0
HERC3-207ENST00000452979 USP17L4A6NCW7 530 aa15.06■□□□□ 0
HERC3-207ENST00000452979 APAF1O14727 1248 aa15.06■□□□□ 0
HERC3-207ENST00000452979 DDX58O95786 925 aaKnown RBP15.06■□□□□ 0
HERC3-207ENST00000452979 USP17L1Q7RTZ2 530 aa15.06■□□□□ 0
HERC3-207ENST00000452979 RASAL3Q86YV0 1011 aa15.06■□□□□ 0
HERC3-207ENST00000452979 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
HERC3-207ENST00000452979 MYH3P11055 1940 aa15.05■□□□□ 0
HERC3-207ENST00000452979 CCDC30Q5VVM6 783 aa15.05■□□□□ -0
HERC3-207ENST00000452979 CCDC85AQ96PX6 553 aaPredicted RBP15.05■□□□□ -0
HERC3-207ENST00000452979 MED23Q9ULK4 1368 aa15.04■□□□□ -0
HERC3-207ENST00000452979 WTIPA6NIX2 430 aaPredicted RBP15.04■□□□□ -0
HERC3-207ENST00000452979 KSR2Q6VAB6 950 aa15.04■□□□□ -0
HERC3-207ENST00000452979 TTLL11Q8NHH1 800 aa15.04■□□□□ -0
HERC3-207ENST00000452979 CDC5LQ99459 802 aaKnown RBP15.04■□□□□ -0
HERC3-207ENST00000452979 PRKRIP1Q9H875 184 aaPredicted RBP15.04■□□□□ -0
HERC3-207ENST00000452979 BSDC1Q9NW68 430 aaPredicted RBP15.04■□□□□ -0
HERC3-207ENST00000452979 MINPP1Q9UNW1 487 aa15.04■□□□□ -0
HERC3-207ENST00000452979 MAP3K2Q9Y2U5 619 aa15.04■□□□□ -0
HERC3-207ENST00000452979 IGKV5-2P06315 115 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms