RNA–Protein interactions for RNA: ENST00000452666.3

VPS8-212, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 578 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-212ENST00000452666 GALNT11Q8NCW6 608 aa7.01□□□□□ -1.29
VPS8-212ENST00000452666 GIMAP7Q8NHV1 300 aa7.01□□□□□ -1.29
VPS8-212ENST00000452666 SCG3Q8WXD2 468 aaKnown RBP7.01□□□□□ -1.29
VPS8-212ENST00000452666 RBM19Q9Y4C8 960 aaKnown RBP7.01□□□□□ -1.29
VPS8-212ENST00000452666 DBX1A6NMT0 343 aa7□□□□□ -1.29
VPS8-212ENST00000452666 TP53INP2Q8IXH6 220 aa7□□□□□ -1.29
VPS8-212ENST00000452666 CCER1Q8TC90 406 aaPredicted RBP7□□□□□ -1.29
VPS8-212ENST00000452666 CCDC39Q9UFE4 941 aa7□□□□□ -1.29
VPS8-212ENST00000452666 TRIM33Q9UPN9 1127 aa7□□□□□ -1.29
VPS8-212ENST00000452666 SART1O43290 800 aaKnown RBP6.99□□□□□ -1.29
VPS8-212ENST00000452666 BMP3P12645 472 aa6.99□□□□□ -1.29
VPS8-212ENST00000452666 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.99□□□□□ -1.29
VPS8-212ENST00000452666 VSIG10LQ86VR7 867 aa6.99□□□□□ -1.29
VPS8-212ENST00000452666 NSUN5Q96P11 429 aaKnown RBP6.99□□□□□ -1.29
VPS8-212ENST00000452666 ALG2Q9H553 416 aa6.99□□□□□ -1.29
VPS8-212ENST00000452666 LEMD3Q9Y2U8 911 aa6.99□□□□□ -1.29
VPS8-212ENST00000452666 LINC01387J3KSC0 135 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 PRNPP04156 253 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 DUOXA2Q1HG44 320 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 MSMPQ1L6U9 139 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 KIAA1211Q6ZU35 1233 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 PLEKHM2Q8IWE5 1019 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 SIX5Q8N196 739 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 OGFOD1Q8N543 542 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 MFSD14AQ96MC6 490 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 ATG3Q9NT62 314 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 HIF3AQ9Y2N7 669 aa6.98□□□□□ -1.29
VPS8-212ENST00000452666 EGFRP00533 1210 aa6.97□□□□□ -1.29
VPS8-212ENST00000452666 HOXD8P13378 290 aaPredicted RBP6.97□□□□□ -1.29
VPS8-212ENST00000452666 SOX18P35713 384 aa6.97□□□□□ -1.29
VPS8-212ENST00000452666 CPSF6Q16630 551 aaKnown RBP eCLIP6.97□□□□□ -1.29
VPS8-212ENST00000452666 ZNF648Q5T619 568 aaPredicted RBP6.97□□□□□ -1.29
VPS8-212ENST00000452666 KCNK4Q9NYG8 393 aa6.97□□□□□ -1.29
VPS8-212ENST00000452666 KLK14Q9P0G3 267 aa6.97□□□□□ -1.29
VPS8-212ENST00000452666 PRKCSHP14314 528 aaPredicted RBP6.96□□□□□ -1.3
VPS8-212ENST00000452666 FOSL1P15407 271 aa6.96□□□□□ -1.3
VPS8-212ENST00000452666 USP17L3A6NCW0 530 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 USP17L4A6NCW7 530 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 XYLBO75191 536 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 MICAL2O94851 1124 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 RASA1P20936 1047 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 ZNF124Q15973 351 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 ANKRD34AQ69YU3 496 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 USP17L2Q6R6M4 530 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 USP17L1Q7RTZ2 530 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 KLHL23Q8NBE8 558 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 AGBL5Q8NDL9 886 aa6.95□□□□□ -1.3
VPS8-212ENST00000452666 PKN1Q16512 942 aa6.94□□□□□ -1.3
VPS8-212ENST00000452666 TXNDC11Q6PKC3 985 aa6.94□□□□□ -1.3
VPS8-212ENST00000452666 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
VPS8-212ENST00000452666 OSBPL1AQ9BXW6 950 aa6.94□□□□□ -1.3
VPS8-212ENST00000452666 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
VPS8-212ENST00000452666 RTCBQ9Y3I0 505 aaKnown RBP6.94□□□□□ -1.3
VPS8-212ENST00000452666 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 MMP20O60882 483 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 DGKZQ13574 1117 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 LCE5AQ5TCM9 118 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 FAM117BQ6P1L5 589 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 NFXL1Q6ZNB6 911 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 CARD10Q9BWT7 1032 aa6.93□□□□□ -1.3
VPS8-212ENST00000452666 TM4SF5O14894 197 aa6.92□□□□□ -1.3
VPS8-212ENST00000452666 FSCN2O14926 492 aa6.92□□□□□ -1.3
VPS8-212ENST00000452666 PREPP48147 710 aa6.92□□□□□ -1.3
VPS8-212ENST00000452666 COL19A1Q14993 1142 aa6.92□□□□□ -1.3
VPS8-212ENST00000452666 FBXL6Q8N531 539 aa6.92□□□□□ -1.3
VPS8-212ENST00000452666 UBASH3BQ8TF42 649 aa6.92□□□□□ -1.3
VPS8-212ENST00000452666 BSDC1Q9NW68 430 aaPredicted RBP6.92□□□□□ -1.3
VPS8-212ENST00000452666 DKK1O94907 266 aa6.91□□□□□ -1.3
VPS8-212ENST00000452666 CDC27P30260 824 aa6.91□□□□□ -1.3
VPS8-212ENST00000452666 LACRTQ9GZZ8 138 aa6.91□□□□□ -1.3
VPS8-212ENST00000452666 MKRN1Q9UHC7 482 aaKnown RBP6.91□□□□□ -1.3
VPS8-212ENST00000452666 GAS2O43903 313 aaKnown RBP6.9□□□□□ -1.3
VPS8-212ENST00000452666 FARP2O94887 1054 aaPredicted RBP6.9□□□□□ -1.3
VPS8-212ENST00000452666 PAPLNO95428 1278 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 F13BP05160 661 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 CDC25BP30305 580 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 SEC13P55735 322 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 TPRNQ4KMQ1 711 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 FDX2Q6P4F2 183 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 CMTR1Q8N1G2 835 aaKnown RBP6.9□□□□□ -1.3
VPS8-212ENST00000452666 FLCNQ8NFG4 579 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
VPS8-212ENST00000452666 METTL22Q9BUU2 404 aaPredicted RBP6.9□□□□□ -1.3
VPS8-212ENST00000452666 RNF208Q9H0X6 261 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 USP20Q9Y2K6 914 aa6.9□□□□□ -1.3
VPS8-212ENST00000452666 DDX3YO15523 660 aaKnown RBP6.89□□□□□ -1.31
VPS8-212ENST00000452666 ADAM11O75078 769 aa6.89□□□□□ -1.31
VPS8-212ENST00000452666 SMNDC1O75940 238 aaKnown RBP eCLIP6.89□□□□□ -1.31
VPS8-212ENST00000452666 MAP4P27816 1152 aaKnown RBP6.89□□□□□ -1.31
VPS8-212ENST00000452666 C11orf91Q3C1V1 193 aa6.89□□□□□ -1.31
VPS8-212ENST00000452666 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
VPS8-212ENST00000452666 RGL4Q8IZJ4 473 aa6.89□□□□□ -1.31
VPS8-212ENST00000452666 BIN1O00499 593 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 OPLAHO14841 1288 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 IGFBP4P22692 258 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 CEP135Q66GS9 1140 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 WWC1Q8IX03 1113 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 COL26A1Q96A83 441 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 SPACA7Q96KW9 195 aa6.88□□□□□ -1.31
VPS8-212ENST00000452666 HINFPQ9BQA5 517 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms