RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 YTHDC1Q96MU7 727 aaKnown RBP18.03■□□□□ 0.48
COL3A1-203ENST00000450867 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
COL3A1-203ENST00000450867 FZD9O00144 591 aa18.02■□□□□ 0.48
COL3A1-203ENST00000450867 MS4A1P11836 297 aa18.02■□□□□ 0.48
COL3A1-203ENST00000450867 POLLQ9UGP5 575 aa18.02■□□□□ 0.48
COL3A1-203ENST00000450867 ZNF646O15015 1829 aaPredicted RBP18.02■□□□□ 0.47
COL3A1-203ENST00000450867 SCN9AQ15858 1988 aa18.01■□□□□ 0.47
COL3A1-203ENST00000450867 GLTPD2A6NH11 291 aa18.01■□□□□ 0.47
COL3A1-203ENST00000450867 MTX1Q13505 466 aa18.01■□□□□ 0.47
COL3A1-203ENST00000450867 FTSJ3Q8IY81 847 aaKnown RBP18.01■□□□□ 0.47
COL3A1-203ENST00000450867 LARGE2Q8N3Y3 721 aa18.01■□□□□ 0.47
COL3A1-203ENST00000450867 MPHOSPH8Q99549 860 aa18.01■□□□□ 0.47
COL3A1-203ENST00000450867 CHMP3Q9Y3E7 222 aa18.01■□□□□ 0.47
COL3A1-203ENST00000450867 PPIP5K2O43314 1243 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 RFX5P48382 616 aaPredicted RBP18■□□□□ 0.47
COL3A1-203ENST00000450867 AOC3Q16853 763 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 JDP2Q8WYK2 163 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 EYA3Q99504 573 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 ANKRD2Q9GZV1 360 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 ANKIB1Q9P2G1 1089 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 GGA1Q9UJY5 639 aa18■□□□□ 0.47
COL3A1-203ENST00000450867 LRRFIP2Q9Y608 721 aaKnown RBP18■□□□□ 0.47
COL3A1-203ENST00000450867 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
COL3A1-203ENST00000450867 ATP2B4P23634 1241 aa17.99■□□□□ 0.47
COL3A1-203ENST00000450867 LEMD3Q9Y2U8 911 aa17.99■□□□□ 0.47
COL3A1-203ENST00000450867 MED23Q9ULK4 1368 aa17.99■□□□□ 0.47
COL3A1-203ENST00000450867 UFL1O94874 794 aa17.98■□□□□ 0.47
COL3A1-203ENST00000450867 CHRNDQ07001 517 aa17.98■□□□□ 0.47
COL3A1-203ENST00000450867 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
COL3A1-203ENST00000450867 LDHAL6AQ6ZMR3 332 aa17.98■□□□□ 0.47
COL3A1-203ENST00000450867 ZNF594Q96JF6 807 aaPredicted RBP17.98■□□□□ 0.47
COL3A1-203ENST00000450867 ZNF541Q9H0D2 1346 aa17.98■□□□□ 0.47
COL3A1-203ENST00000450867 C6orf229H3BNL8 230 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 ZBTB7BO15156 539 aaPredicted RBP17.97■□□□□ 0.47
COL3A1-203ENST00000450867 GNAI2P04899 355 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 PDE3AQ14432 1141 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 DPY19L2Q6NUT2 758 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 NIM1KQ8IY84 436 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 PANK1Q8TE04 598 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 L3MBTL3Q96JM7 780 aaPredicted RBP17.97■□□□□ 0.47
COL3A1-203ENST00000450867 GPBP1L1Q9HC44 474 aaPredicted RBP17.97■□□□□ 0.47
COL3A1-203ENST00000450867 FBXO3Q9UK99 471 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 ZNRF3Q9ULT6 936 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 RIPOR2Q9Y4F9 1068 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 IRS2Q9Y4H2 1338 aa17.97■□□□□ 0.47
COL3A1-203ENST00000450867 PTPN12Q05209 780 aaKnown RBP17.96■□□□□ 0.47
COL3A1-203ENST00000450867 TAF7LQ5H9L4 462 aa17.96■□□□□ 0.47
COL3A1-203ENST00000450867 C15orf52Q6ZUT6 534 aaKnown RBP17.96■□□□□ 0.47
COL3A1-203ENST00000450867 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
COL3A1-203ENST00000450867 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.96■□□□□ 0.47
COL3A1-203ENST00000450867 GPC2Q8N158 579 aa17.95■□□□□ 0.46
COL3A1-203ENST00000450867 PUS3Q9BZE2 481 aaKnown RBP17.95■□□□□ 0.46
COL3A1-203ENST00000450867 ZC3H12CQ9C0D7 883 aaKnown RBP17.95■□□□□ 0.46
COL3A1-203ENST00000450867 CNNM1Q9NRU3 951 aa17.95■□□□□ 0.46
COL3A1-203ENST00000450867 ZNF609O15014 1411 aa17.95■□□□□ 0.46
COL3A1-203ENST00000450867 ZNF804BA4D1E1 1349 aa17.95■□□□□ 0.46
COL3A1-203ENST00000450867 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
COL3A1-203ENST00000450867 WTIPA6NIX2 430 aaPredicted RBP17.94■□□□□ 0.46
COL3A1-203ENST00000450867 PLIN1O60240 522 aa17.94■□□□□ 0.46
COL3A1-203ENST00000450867 EIF6P56537 245 aaKnown RBP17.94■□□□□ 0.46
COL3A1-203ENST00000450867 MVPQ14764 893 aaKnown RBP17.94■□□□□ 0.46
COL3A1-203ENST00000450867 GPR101Q96P66 508 aaPredicted RBP17.94■□□□□ 0.46
COL3A1-203ENST00000450867 COPRSQ9NQ92 184 aa17.94■□□□□ 0.46
COL3A1-203ENST00000450867 ARAP2Q8WZ64 1704 aa17.94■□□□□ 0.46
COL3A1-203ENST00000450867 YDJCA8MPS7 323 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 POTECB2RU33 542 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 KIF3CO14782 793 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 CIAO1O76071 339 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 DDNO94850 711 aaPredicted RBP17.93■□□□□ 0.46
COL3A1-203ENST00000450867 VGLL2Q8N8G2 317 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 ZNF526Q8TF50 670 aaPredicted RBP17.93■□□□□ 0.46
COL3A1-203ENST00000450867 NMRK2Q9NPI5 230 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 DDX19BQ9UMR2 479 aa17.93■□□□□ 0.46
COL3A1-203ENST00000450867 ADAMTSL1Q8N6G6 1762 aa17.92■□□□□ 0.46
COL3A1-203ENST00000450867 EYA2O00167 538 aa17.92■□□□□ 0.46
COL3A1-203ENST00000450867 CXCL9Q07325 125 aa17.92■□□□□ 0.46
COL3A1-203ENST00000450867 LRRC24Q50LG9 513 aa17.92■□□□□ 0.46
COL3A1-203ENST00000450867 ATG9AQ7Z3C6 839 aa17.92■□□□□ 0.46
COL3A1-203ENST00000450867 KLHDC4Q8TBB5 520 aa17.92■□□□□ 0.46
COL3A1-203ENST00000450867 RIMBP2O15034 1052 aa17.91■□□□□ 0.46
COL3A1-203ENST00000450867 ECE2O60344 883 aa17.91■□□□□ 0.46
COL3A1-203ENST00000450867 TAF5LO75529 589 aa17.91■□□□□ 0.46
COL3A1-203ENST00000450867 UBE4AQ14139 1066 aa17.91■□□□□ 0.46
COL3A1-203ENST00000450867 HELBQ8NG08 1087 aaPredicted RBP17.91■□□□□ 0.46
COL3A1-203ENST00000450867 DBNDD1Q9H9R9 158 aa17.91■□□□□ 0.46
COL3A1-203ENST00000450867 MYH13Q9UKX3 1938 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 SRGAP3O43295 1099 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 VEGFAP15692 232 aaPredicted RBP17.9■□□□□ 0.46
COL3A1-203ENST00000450867 POLA2Q14181 598 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 C20orf194Q5TEA3 1177 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 CIAPIN1Q6FI81 312 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 PODNQ7Z5L7 613 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 TXNRD3Q86VQ6 643 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 SSH3Q8TE77 659 aa17.9■□□□□ 0.46
COL3A1-203ENST00000450867 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
COL3A1-203ENST00000450867 PDE8BO95263 885 aa17.89■□□□□ 0.45
COL3A1-203ENST00000450867 KLRK1P26718 216 aa17.89■□□□□ 0.45
COL3A1-203ENST00000450867 RRP1P56182 461 aaKnown RBP17.89■□□□□ 0.45
COL3A1-203ENST00000450867 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
COL3A1-203ENST00000450867 TNIP1Q15025 636 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms