RNA–Protein interactions for RNA: ENST00000449811.5

CPSF7-207, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-207ENST00000449811 ASTN2O75129 1339 aaPredicted RBP17.98■□□□□ 0.47
CPSF7-207ENST00000449811 SF3B3Q15393 1217 aaKnown RBP17.97■□□□□ 0.47
CPSF7-207ENST00000449811 PKN2Q16513 984 aaKnown RBP17.97■□□□□ 0.47
CPSF7-207ENST00000449811 PNNQ9H307 717 aaKnown RBP17.97■□□□□ 0.47
CPSF7-207ENST00000449811 VIL1P09327 827 aaKnown RBP17.96■□□□□ 0.47
CPSF7-207ENST00000449811 TBC1D16Q8TBP0 767 aa17.96■□□□□ 0.47
CPSF7-207ENST00000449811 HDAC9Q9UKV0 1011 aa17.96■□□□□ 0.47
CPSF7-207ENST00000449811 DDX60Q8IY21 1712 aaKnown RBP17.95■□□□□ 0.46
CPSF7-207ENST00000449811 FKBP1BP68106 108 aa17.95■□□□□ 0.46
CPSF7-207ENST00000449811 ANGEL2Q5VTE6 544 aaKnown RBP17.95■□□□□ 0.46
CPSF7-207ENST00000449811 BABAM1Q9NWV8 329 aa17.95■□□□□ 0.46
CPSF7-207ENST00000449811 SCARF1Q14162 830 aa17.94■□□□□ 0.46
CPSF7-207ENST00000449811 FAM89AQ96GI7 184 aa17.94■□□□□ 0.46
CPSF7-207ENST00000449811 ZC3H12CQ9C0D7 883 aaKnown RBP17.94■□□□□ 0.46
CPSF7-207ENST00000449811 G3V3G9 751 aa17.93■□□□□ 0.46
CPSF7-207ENST00000449811 ZNF280AP59817 542 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-207ENST00000449811 DCAF8Q5TAQ9 597 aa17.93■□□□□ 0.46
CPSF7-207ENST00000449811 ZNF296Q8WUU4 475 aaPredicted RBP17.93■□□□□ 0.46
CPSF7-207ENST00000449811 PAPPA2Q9BXP8 1791 aa17.93■□□□□ 0.46
CPSF7-207ENST00000449811 COL4A1P02462 1669 aa17.93■□□□□ 0.46
CPSF7-207ENST00000449811 SCN9AQ15858 1988 aa17.92■□□□□ 0.46
CPSF7-207ENST00000449811 TBC1D8O95759 1140 aa17.92■□□□□ 0.46
CPSF7-207ENST00000449811 RIPK4P57078 832 aa17.92■□□□□ 0.46
CPSF7-207ENST00000449811 RPS8P62241 208 aaKnown RBP17.92■□□□□ 0.46
CPSF7-207ENST00000449811 AGBL3Q8NEM8 1001 aa17.92■□□□□ 0.46
CPSF7-207ENST00000449811 PLBD2Q8NHP8 589 aa17.92■□□□□ 0.46
CPSF7-207ENST00000449811 ISCA1Q9BUE6 129 aa17.92■□□□□ 0.46
CPSF7-207ENST00000449811 ATP5J2-PTCD1G3V325 749 aa17.91■□□□□ 0.46
CPSF7-207ENST00000449811 UFL1O94874 794 aa17.91■□□□□ 0.46
CPSF7-207ENST00000449811 RTL5Q5HYW3 569 aaPredicted RBP17.91■□□□□ 0.46
CPSF7-207ENST00000449811 RSBN1LQ6PCB5 846 aaPredicted RBP17.91■□□□□ 0.46
CPSF7-207ENST00000449811 PODXL2Q9NZ53 605 aa17.91■□□□□ 0.46
CPSF7-207ENST00000449811 CHPF2Q9P2E5 772 aa17.91■□□□□ 0.46
CPSF7-207ENST00000449811 ZNF609O15014 1411 aa17.9■□□□□ 0.46
CPSF7-207ENST00000449811 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
CPSF7-207ENST00000449811 MOB2Q70IA6 237 aa17.9■□□□□ 0.46
CPSF7-207ENST00000449811 ANKIB1Q9P2G1 1089 aa17.9■□□□□ 0.46
CPSF7-207ENST00000449811 PITPNM2Q9BZ72 1349 aa17.9■□□□□ 0.46
CPSF7-207ENST00000449811 UBE2Q2LH0YL09 131 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
CPSF7-207ENST00000449811 USP17L8P0C7I0 530 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 LMOD3Q0VAK6 560 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 KRT24Q2M2I5 525 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 FBXO46Q6PJ61 603 aaPredicted RBP17.89■□□□□ 0.45
CPSF7-207ENST00000449811 GCC1Q96CN9 775 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 MYOZ2Q9NPC6 264 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 GGA1Q9UJY5 639 aa17.89■□□□□ 0.45
CPSF7-207ENST00000449811 SCAF8Q9UPN6 1271 aaKnown RBP17.89■□□□□ 0.45
CPSF7-207ENST00000449811 GPR25O00155 361 aa17.88■□□□□ 0.45
CPSF7-207ENST00000449811 NOM1Q5C9Z4 860 aaKnown RBP17.88■□□□□ 0.45
CPSF7-207ENST00000449811 TM4SF4P48230 202 aa17.87■□□□□ 0.45
CPSF7-207ENST00000449811 TTLL12Q14166 644 aaPredicted RBP17.87■□□□□ 0.45
CPSF7-207ENST00000449811 HDGFL1Q5TGJ6 251 aa17.87■□□□□ 0.45
CPSF7-207ENST00000449811 GMLQ99445 158 aa17.87■□□□□ 0.45
CPSF7-207ENST00000449811 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
CPSF7-207ENST00000449811 PRAMEF18Q5VWM3 479 aa17.86■□□□□ 0.45
CPSF7-207ENST00000449811 MKI67P46013 3256 aaKnown RBP17.86■□□□□ 0.45
CPSF7-207ENST00000449811 TMPOP42166 694 aaKnown RBP17.85■□□□□ 0.45
CPSF7-207ENST00000449811 MKRN3Q13064 507 aaKnown RBP17.85■□□□□ 0.45
CPSF7-207ENST00000449811 TRIM28Q13263 835 aaKnown RBP17.85■□□□□ 0.45
CPSF7-207ENST00000449811 DBF4Q9UBU7 674 aaPredicted RBP17.85■□□□□ 0.45
CPSF7-207ENST00000449811 USP17L3A6NCW0 530 aa17.84■□□□□ 0.45
CPSF7-207ENST00000449811 USP17L4A6NCW7 530 aa17.84■□□□□ 0.45
CPSF7-207ENST00000449811 CHL1O00533 1208 aa17.84■□□□□ 0.45
CPSF7-207ENST00000449811 FKTNO75072 461 aa17.84■□□□□ 0.45
CPSF7-207ENST00000449811 SREBF2Q12772 1141 aa17.84■□□□□ 0.45
CPSF7-207ENST00000449811 USP17L1Q7RTZ2 530 aa17.84■□□□□ 0.45
CPSF7-207ENST00000449811 HSP90B1P14625 803 aaKnown RBP17.83■□□□□ 0.44
CPSF7-207ENST00000449811 NF2P35240 595 aa17.83■□□□□ 0.44
CPSF7-207ENST00000449811 NBPF9Q3BBW0 867 aa17.83■□□□□ 0.44
CPSF7-207ENST00000449811 PODNQ7Z5L7 613 aa17.83■□□□□ 0.44
CPSF7-207ENST00000449811 ZBTB38Q8NAP3 1195 aaPredicted RBP17.83■□□□□ 0.44
CPSF7-207ENST00000449811 LAS1LQ9Y4W2 734 aaKnown RBP17.83■□□□□ 0.44
CPSF7-207ENST00000449811 PSME4Q14997 1843 aa17.82■□□□□ 0.44
CPSF7-207ENST00000449811 XDHP47989 1333 aa17.82■□□□□ 0.44
CPSF7-207ENST00000449811 HOXB7P09629 217 aa17.82■□□□□ 0.44
CPSF7-207ENST00000449811 CCDC152Q4G0S7 254 aa17.82■□□□□ 0.44
CPSF7-207ENST00000449811 HABP4Q5JVS0 413 aaKnown RBP17.82■□□□□ 0.44
CPSF7-207ENST00000449811 CFHR5Q9BXR6 569 aa17.82■□□□□ 0.44
CPSF7-207ENST00000449811 HYPKQ9NX55 129 aa17.82■□□□□ 0.44
CPSF7-207ENST00000449811 ATP2B4P23634 1241 aa17.81■□□□□ 0.44
CPSF7-207ENST00000449811 R3HDMLQ9H3Y0 253 aa17.81■□□□□ 0.44
CPSF7-207ENST00000449811 HTTP42858 3142 aa17.81■□□□□ 0.44
CPSF7-207ENST00000449811 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
CPSF7-207ENST00000449811 RIC3Q7Z5B4 369 aa17.8■□□□□ 0.44
CPSF7-207ENST00000449811 OGFOD1Q8N543 542 aa17.8■□□□□ 0.44
CPSF7-207ENST00000449811 CCDC85AQ96PX6 553 aaPredicted RBP17.8■□□□□ 0.44
CPSF7-207ENST00000449811 WNT10BO00744 389 aa17.79■□□□□ 0.44
CPSF7-207ENST00000449811 PTPN12Q05209 780 aaKnown RBP17.79■□□□□ 0.44
CPSF7-207ENST00000449811 ARMC9Q7Z3E5 817 aa17.79■□□□□ 0.44
CPSF7-207ENST00000449811 ANKRD18AQ8IVF6 992 aa17.79■□□□□ 0.44
CPSF7-207ENST00000449811 PDE8AO60658 829 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 ALDH1A1P00352 501 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 GOLGA2Q08379 1002 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 PRKG1Q13976 671 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 MXD3Q9BW11 206 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 TRIM17Q9Y577 477 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 CENPFP49454 3210 aa17.78■□□□□ 0.44
CPSF7-207ENST00000449811 POTEFA5A3E0 1075 aa17.77■□□□□ 0.44
CPSF7-207ENST00000449811 PCCAP05165 728 aaPredicted RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms