RNA–Protein interactions for RNA: ENST00000449415.5

RFTN1-205, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 3

Gene RFTN1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-205ENST00000449415 LMBR1LQ6UX01 489 aa22.7■■□□□ 1.22
RFTN1-205ENST00000449415 SUCLG2Q96I99 432 aa22.7■■□□□ 1.22
RFTN1-205ENST00000449415 DBNDD1Q9H9R9 158 aa22.7■■□□□ 1.22
RFTN1-205ENST00000449415 BSDC1Q9NW68 430 aaPredicted RBP22.7■■□□□ 1.22
RFTN1-205ENST00000449415 PODXL2Q9NZ53 605 aa22.7■■□□□ 1.22
RFTN1-205ENST00000449415 HACL1Q9UJ83 578 aa22.7■■□□□ 1.22
RFTN1-205ENST00000449415 XDHP47989 1333 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 ANKRD18BA2A2Z9 1011 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 RAD17O75943 681 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 POTEIP0CG38 1075 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 POTEJP0CG39 1038 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 HSPA6P17066 643 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 CXCL9Q07325 125 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 SMC1BQ8NDV3 1235 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 MPHOSPH8Q99549 860 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 TAF1DQ9H5J8 278 aaPredicted RBP22.69■■□□□ 1.22
RFTN1-205ENST00000449415 MINPP1Q9UNW1 487 aa22.69■■□□□ 1.22
RFTN1-205ENST00000449415 WTIPA6NIX2 430 aaPredicted RBP22.68■■□□□ 1.22
RFTN1-205ENST00000449415 YDJCA8MPS7 323 aa22.68■■□□□ 1.22
RFTN1-205ENST00000449415 EAPPQ56P03 285 aaPredicted RBP22.68■■□□□ 1.22
RFTN1-205ENST00000449415 ZC3H12CQ9C0D7 883 aaKnown RBP22.68■■□□□ 1.22
RFTN1-205ENST00000449415 EPHX2P34913 555 aa22.67■■□□□ 1.22
RFTN1-205ENST00000449415 FSTL1Q12841 308 aa22.67■■□□□ 1.22
RFTN1-205ENST00000449415 IFIT5Q13325 482 aaKnown RBP22.67■■□□□ 1.22
RFTN1-205ENST00000449415 CIAPIN1Q6FI81 312 aa22.67■■□□□ 1.22
RFTN1-205ENST00000449415 ZBED9Q6R2W3 1325 aa22.66■■□□□ 1.22
RFTN1-205ENST00000449415 G3V3G9 751 aa22.66■■□□□ 1.22
RFTN1-205ENST00000449415 ATP2B4P23634 1241 aa22.66■■□□□ 1.22
RFTN1-205ENST00000449415 LMOD1P29536 600 aaPredicted RBP22.66■■□□□ 1.22
RFTN1-205ENST00000449415 DCAF8Q5TAQ9 597 aa22.66■■□□□ 1.22
RFTN1-205ENST00000449415 KAZALD1Q96I82 304 aa22.66■■□□□ 1.22
RFTN1-205ENST00000449415 ZNF594Q96JF6 807 aaPredicted RBP22.66■■□□□ 1.22
RFTN1-205ENST00000449415 UTYO14607 1347 aa22.65■■□□□ 1.22
RFTN1-205ENST00000449415 ECE2O60344 883 aa22.65■■□□□ 1.22
RFTN1-205ENST00000449415 BRPF1P55201 1214 aaPredicted RBP22.65■■□□□ 1.22
RFTN1-205ENST00000449415 API5Q9BZZ5 524 aaKnown RBP22.65■■□□□ 1.22
RFTN1-205ENST00000449415 SCN9AQ15858 1988 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 BCAR3O75815 825 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 EPS15P42566 896 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 SCNN1DP51172 638 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 TNIP1Q15025 636 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 CCDC57Q2TAC2 916 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 TAF7LQ5H9L4 462 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 USP44Q9H0E7 712 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 KCNQ5Q9NR82 932 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 CLEC11AQ9Y240 323 aa22.64■■□□□ 1.21
RFTN1-205ENST00000449415 A0A1B0GUL6 1792 aa22.63■■□□□ 1.21
RFTN1-205ENST00000449415 GMPSP49915 693 aaPredicted RBP22.63■■□□□ 1.21
RFTN1-205ENST00000449415 CCT4P50991 539 aaKnown RBP22.63■■□□□ 1.21
RFTN1-205ENST00000449415 BICC1Q9H694 974 aaKnown RBP22.63■■□□□ 1.21
RFTN1-205ENST00000449415 KIF16BQ96L93 1317 aa22.62■■□□□ 1.21
RFTN1-205ENST00000449415 CHRNDQ07001 517 aa22.62■■□□□ 1.21
RFTN1-205ENST00000449415 CHADLQ6NUI6 762 aa22.62■■□□□ 1.21
RFTN1-205ENST00000449415 FRAT1Q92837 279 aaPredicted RBP22.62■■□□□ 1.21
RFTN1-205ENST00000449415 PSMD14O00487 310 aa22.61■■□□□ 1.21
RFTN1-205ENST00000449415 LDHDQ86WU2 507 aa22.61■■□□□ 1.21
RFTN1-205ENST00000449415 HELBQ8NG08 1087 aaPredicted RBP22.61■■□□□ 1.21
RFTN1-205ENST00000449415 ANKRD2Q9GZV1 360 aa22.61■■□□□ 1.21
RFTN1-205ENST00000449415 ZBTB12Q9Y330 459 aaPredicted RBP22.61■■□□□ 1.21
RFTN1-205ENST00000449415 TAF5LO75529 589 aa22.6■■□□□ 1.21
RFTN1-205ENST00000449415 PNMA8AQ86V59 439 aaPredicted RBP22.6■■□□□ 1.21
RFTN1-205ENST00000449415 ANKRD44Q8N8A2 993 aa22.6■■□□□ 1.21
RFTN1-205ENST00000449415 GPRC5DQ9NZD1 345 aa22.6■■□□□ 1.21
RFTN1-205ENST00000449415 ADAMTSL1Q8N6G6 1762 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 PLIN1O60240 522 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 KCNJ4P48050 445 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 HTRA3P83110 453 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 LDHAL6AQ6ZMR3 332 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 CNNM1Q9NRU3 951 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 TNNQ9UQP3 1299 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 LEMD3Q9Y2U8 911 aa22.59■■□□□ 1.21
RFTN1-205ENST00000449415 ZNF804BA4D1E1 1349 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 SHTN1A0MZ66 631 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 SNAP23O00161 211 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 KLRK1P26718 216 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 APLP1P51693 650 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 ARHGAP45Q92619 1136 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 MED23Q9ULK4 1368 aa22.58■■□□□ 1.21
RFTN1-205ENST00000449415 PSME4Q14997 1843 aa22.57■■□□□ 1.2
RFTN1-205ENST00000449415 IPO8O15397 1037 aaKnown RBP22.57■■□□□ 1.2
RFTN1-205ENST00000449415 RABL6Q3YEC7 729 aaPredicted RBP22.57■■□□□ 1.2
RFTN1-205ENST00000449415 TXNRD3Q86VQ6 643 aa22.57■■□□□ 1.2
RFTN1-205ENST00000449415 UBTFL1P0CB47 393 aaPredicted RBP22.56■■□□□ 1.2
RFTN1-205ENST00000449415 MAP1SQ66K74 1059 aaPredicted RBP22.56■■□□□ 1.2
RFTN1-205ENST00000449415 CLUAP1Q96AJ1 413 aa22.56■■□□□ 1.2
RFTN1-205ENST00000449415 PUS3Q9BZE2 481 aaKnown RBP22.56■■□□□ 1.2
RFTN1-205ENST00000449415 CNOT7Q9UIV1 285 aaKnown RBP22.56■■□□□ 1.2
RFTN1-205ENST00000449415 TRIM27P14373 513 aa22.55■■□□□ 1.2
RFTN1-205ENST00000449415 ATF7IPQ6VMQ6 1270 aa22.55■■□□□ 1.2
RFTN1-205ENST00000449415 MICALL2Q8IY33 904 aa22.55■■□□□ 1.2
RFTN1-205ENST00000449415 ADARB2Q9NS39 739 aaKnown RBP22.55■■□□□ 1.2
RFTN1-205ENST00000449415 USP50Q70EL3 339 aaPredicted RBP22.54■■□□□ 1.2
RFTN1-205ENST00000449415 KLHDC4Q8TBB5 520 aa22.54■■□□□ 1.2
RFTN1-205ENST00000449415 FBXW7Q969H0 707 aa22.54■■□□□ 1.2
RFTN1-205ENST00000449415 H7C1D1 291 aa22.53■■□□□ 1.2
RFTN1-205ENST00000449415 INTS3Q68E01 1043 aaKnown RBP22.53■■□□□ 1.2
RFTN1-205ENST00000449415 PODNQ7Z5L7 613 aa22.53■■□□□ 1.2
RFTN1-205ENST00000449415 MEIS3Q99687 375 aa22.53■■□□□ 1.2
RFTN1-205ENST00000449415 VIL1P09327 827 aaKnown RBP22.52■■□□□ 1.2
RFTN1-205ENST00000449415 LRRC24Q50LG9 513 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms