RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 TAF1DQ9H5J8 278 aaPredicted RBP22.13■■□□□ 1.13
HLCS-205ENST00000448340 BICC1Q9H694 974 aaKnown RBP22.13■■□□□ 1.13
HLCS-205ENST00000448340 GREM2Q9H772 168 aa22.13■■□□□ 1.13
HLCS-205ENST00000448340 CACNA1SQ13698 1873 aa22.12■■□□□ 1.13
HLCS-205ENST00000448340 ITGBL1O95965 494 aaPredicted RBP22.12■■□□□ 1.13
HLCS-205ENST00000448340 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
HLCS-205ENST00000448340 ANKRD44Q8N8A2 993 aa22.12■■□□□ 1.13
HLCS-205ENST00000448340 CHMP4BQ9H444 224 aaKnown RBP22.12■■□□□ 1.13
HLCS-205ENST00000448340 SEC31BQ9NQW1 1179 aa22.12■■□□□ 1.13
HLCS-205ENST00000448340 SUPT16HQ9Y5B9 1047 aaKnown RBP22.12■■□□□ 1.13
HLCS-205ENST00000448340 LRRFIP2Q9Y608 721 aaKnown RBP22.12■■□□□ 1.13
HLCS-205ENST00000448340 FOXN1O15353 648 aa22.11■■□□□ 1.13
HLCS-205ENST00000448340 GNAI2P04899 355 aa22.11■■□□□ 1.13
HLCS-205ENST00000448340 FAM161AQ3B820 660 aa22.11■■□□□ 1.13
HLCS-205ENST00000448340 CDC5LQ99459 802 aaKnown RBP22.11■■□□□ 1.13
HLCS-205ENST00000448340 TAF1P21675 1872 aa22.11■■□□□ 1.13
HLCS-205ENST00000448340 IQCA1LA6NCM1 817 aa22.1■■□□□ 1.13
HLCS-205ENST00000448340 ITGA6P23229 1130 aa22.1■■□□□ 1.13
HLCS-205ENST00000448340 RPS8P62241 208 aaKnown RBP22.1■■□□□ 1.13
HLCS-205ENST00000448340 TMC4Q7Z404 712 aa22.1■■□□□ 1.13
HLCS-205ENST00000448340 CELF1Q92879 486 aaKnown RBP22.1■■□□□ 1.13
HLCS-205ENST00000448340 CHMP3Q9Y3E7 222 aa22.1■■□□□ 1.13
HLCS-205ENST00000448340 ANKRD18BA2A2Z9 1011 aa22.09■■□□□ 1.13
HLCS-205ENST00000448340 PPEF1O14829 653 aaPredicted RBP22.09■■□□□ 1.13
HLCS-205ENST00000448340 IFIT5Q13325 482 aaKnown RBP22.09■■□□□ 1.13
HLCS-205ENST00000448340 FKBP4Q02790 459 aaKnown RBP eCLIP22.08■■□□□ 1.13
HLCS-205ENST00000448340 CCDC57Q2TAC2 916 aa22.08■■□□□ 1.13
HLCS-205ENST00000448340 CCDC93Q567U6 631 aa22.08■■□□□ 1.13
HLCS-205ENST00000448340 ANKRD18AQ8IVF6 992 aa22.08■■□□□ 1.13
HLCS-205ENST00000448340 PRDM10Q9NQV6 1147 aa22.08■■□□□ 1.13
HLCS-205ENST00000448340 ZNF541Q9H0D2 1346 aa22.07■■□□□ 1.12
HLCS-205ENST00000448340 VEGFBP49765 207 aa22.07■■□□□ 1.12
HLCS-205ENST00000448340 CC2D2BQ6DHV5 1058 aa22.07■■□□□ 1.12
HLCS-205ENST00000448340 OLFM4Q6UX06 510 aa22.07■■□□□ 1.12
HLCS-205ENST00000448340 ZNF277Q9NRM2 450 aaPredicted RBP22.07■■□□□ 1.12
HLCS-205ENST00000448340 ATP6V0A2Q9Y487 856 aa22.07■■□□□ 1.12
HLCS-205ENST00000448340 SP8Q8IXZ3 490 aa22.06■■□□□ 1.12
HLCS-205ENST00000448340 TMX4Q9H1E5 349 aaPredicted RBP22.06■■□□□ 1.12
HLCS-205ENST00000448340 ZBTB40Q9NUA8 1239 aa22.06■■□□□ 1.12
HLCS-205ENST00000448340 COL4A1P02462 1669 aa22.05■■□□□ 1.12
HLCS-205ENST00000448340 TMEM88BA6NKF7 163 aa22.05■■□□□ 1.12
HLCS-205ENST00000448340 CENPBP07199 599 aaPredicted RBP22.05■■□□□ 1.12
HLCS-205ENST00000448340 IGHMBP2P38935 993 aaKnown RBP22.05■■□□□ 1.12
HLCS-205ENST00000448340 MTX1Q13505 466 aa22.05■■□□□ 1.12
HLCS-205ENST00000448340 BSDC1Q9NW68 430 aaPredicted RBP22.05■■□□□ 1.12
HLCS-205ENST00000448340 FZD9O00144 591 aa22.04■■□□□ 1.12
HLCS-205ENST00000448340 GRIPAP1Q4V328 841 aa22.04■■□□□ 1.12
HLCS-205ENST00000448340 WBP1LQ9NX94 342 aa22.04■■□□□ 1.12
HLCS-205ENST00000448340 TAF7LQ5H9L4 462 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 RTKN2Q8IZC4 609 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 MPHOSPH8Q99549 860 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 C1orf115Q9H7X2 142 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 HACL1Q9UJ83 578 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 SNED1Q8TER0 1413 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 SCN4AP35499 1836 aa22.03■■□□□ 1.12
HLCS-205ENST00000448340 EPHX2P34913 555 aa22.02■■□□□ 1.12
HLCS-205ENST00000448340 ADAMTSL1Q8N6G6 1762 aa22.02■■□□□ 1.11
HLCS-205ENST00000448340 LRRC37AA6NMS7 1700 aa22.01■■□□□ 1.11
HLCS-205ENST00000448340 RFX5P48382 616 aaPredicted RBP22.01■■□□□ 1.11
HLCS-205ENST00000448340 CTCFP49711 727 aaPredicted RBP22.01■■□□□ 1.11
HLCS-205ENST00000448340 EAPPQ56P03 285 aaPredicted RBP22.01■■□□□ 1.11
HLCS-205ENST00000448340 ZNF594Q96JF6 807 aaPredicted RBP22.01■■□□□ 1.11
HLCS-205ENST00000448340 CRBNQ96SW2 442 aa22.01■■□□□ 1.11
HLCS-205ENST00000448340 SPEF2Q9C093 1822 aa22.01■■□□□ 1.11
HLCS-205ENST00000448340 RASSF10A6NK89 507 aa22■■□□□ 1.11
HLCS-205ENST00000448340 SRGAP3O43295 1099 aa22■■□□□ 1.11
HLCS-205ENST00000448340 IARSP41252 1262 aaKnown RBP22■■□□□ 1.11
HLCS-205ENST00000448340 ATP8B2P98198 1209 aa22■■□□□ 1.11
HLCS-205ENST00000448340 PTPN12Q05209 780 aaKnown RBP21.99■■□□□ 1.11
HLCS-205ENST00000448340 LDHAL6AQ6ZMR3 332 aa21.99■■□□□ 1.11
HLCS-205ENST00000448340 PNMA8AQ86V59 439 aaPredicted RBP21.99■■□□□ 1.11
HLCS-205ENST00000448340 CNTROBQ8N137 903 aa21.99■■□□□ 1.11
HLCS-205ENST00000448340 CEP85Q6P2H3 762 aa21.98■■□□□ 1.11
HLCS-205ENST00000448340 SLC51AQ86UW1 340 aa21.98■■□□□ 1.11
HLCS-205ENST00000448340 MPNDQ8N594 471 aa21.98■■□□□ 1.11
HLCS-205ENST00000448340 CNNM1Q9NRU3 951 aa21.98■■□□□ 1.11
HLCS-205ENST00000448340 MINPP1Q9UNW1 487 aa21.98■■□□□ 1.11
HLCS-205ENST00000448340 PNMA6EA0A0J9YXQ4 647 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 MAP1SQ66K74 1059 aaPredicted RBP21.97■■□□□ 1.11
HLCS-205ENST00000448340 RPAP2Q8IXW5 612 aaPredicted RBP21.97■■□□□ 1.11
HLCS-205ENST00000448340 GPC2Q8N158 579 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 KLHDC4Q8TBB5 520 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 PSMD1Q99460 953 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 COPRSQ9NQ92 184 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 PODXL2Q9NZ53 605 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 FBXO3Q9UK99 471 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 NSFL1CQ9UNZ2 370 aaKnown RBP21.97■■□□□ 1.11
HLCS-205ENST00000448340 CLEC11AQ9Y240 323 aa21.97■■□□□ 1.11
HLCS-205ENST00000448340 LBX1P52954 281 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 GPSM2P81274 684 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 AAMPQ13685 434 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 POLA2Q14181 598 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
HLCS-205ENST00000448340 SSH3Q8TE77 659 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 AIDAQ96BJ3 306 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 ANKRD2Q9GZV1 360 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 RIPOR2Q9Y4F9 1068 aa21.96■■□□□ 1.11
HLCS-205ENST00000448340 DEFB115Q30KQ5 88 aa21.95■■□□□ 1.1
HLCS-205ENST00000448340 RTFDC1Q9BY42 306 aaPredicted RBP21.95■■□□□ 1.1
HLCS-205ENST00000448340 PUS3Q9BZE2 481 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms