RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 ZNRF3Q9ULT6 936 aa31.53■■■□□ 2.64
UFD1-204ENST00000447868 UTYO14607 1347 aa31.52■■■□□ 2.64
UFD1-204ENST00000447868 KIF16BQ96L93 1317 aa31.52■■■□□ 2.64
UFD1-204ENST00000447868 BCAR3O75815 825 aa31.52■■■□□ 2.64
UFD1-204ENST00000447868 GPC2Q8N158 579 aa31.52■■■□□ 2.64
UFD1-204ENST00000447868 EYA3Q99504 573 aa31.52■■■□□ 2.64
UFD1-204ENST00000447868 XDHP47989 1333 aa31.51■■■□□ 2.64
UFD1-204ENST00000447868 IFIT5Q13325 482 aaKnown RBP31.51■■■□□ 2.63
UFD1-204ENST00000447868 L3MBTL3Q96JM7 780 aaPredicted RBP31.51■■■□□ 2.63
UFD1-204ENST00000447868 MPHOSPH8Q99549 860 aa31.51■■■□□ 2.63
UFD1-204ENST00000447868 MINPP1Q9UNW1 487 aa31.51■■■□□ 2.63
UFD1-204ENST00000447868 CCT4P50991 539 aaKnown RBP31.5■■■□□ 2.63
UFD1-204ENST00000447868 RBM46Q8TBY0 533 aaKnown RBP31.5■■■□□ 2.63
UFD1-204ENST00000447868 KAZALD1Q96I82 304 aa31.5■■■□□ 2.63
UFD1-204ENST00000447868 USP44Q9H0E7 712 aa31.49■■■□□ 2.63
UFD1-204ENST00000447868 IQCA1LA6NCM1 817 aa31.48■■■□□ 2.63
UFD1-204ENST00000447868 FRAT1Q92837 279 aaPredicted RBP31.48■■■□□ 2.63
UFD1-204ENST00000447868 DBNDD1Q9H9R9 158 aa31.48■■■□□ 2.63
UFD1-204ENST00000447868 SCN4AP35499 1836 aa31.47■■■□□ 2.63
UFD1-204ENST00000447868 ATP2B4P23634 1241 aa31.47■■■□□ 2.63
UFD1-204ENST00000447868 CXCL9Q07325 125 aa31.47■■■□□ 2.63
UFD1-204ENST00000447868 DOK7Q18PE1 504 aa31.47■■■□□ 2.63
UFD1-204ENST00000447868 CCDC57Q2TAC2 916 aa31.47■■■□□ 2.63
UFD1-204ENST00000447868 ARHGAP45Q92619 1136 aa31.47■■■□□ 2.63
UFD1-204ENST00000447868 ZC3H12CQ9C0D7 883 aaKnown RBP31.47■■■□□ 2.63
UFD1-204ENST00000447868 TAF7LQ5H9L4 462 aa31.46■■■□□ 2.63
UFD1-204ENST00000447868 ZNF594Q96JF6 807 aaPredicted RBP31.46■■■□□ 2.63
UFD1-204ENST00000447868 BICC1Q9H694 974 aaKnown RBP31.46■■■□□ 2.63
UFD1-204ENST00000447868 HACL1Q9UJ83 578 aa31.46■■■□□ 2.63
UFD1-204ENST00000447868 WTIPA6NIX2 430 aaPredicted RBP31.45■■■□□ 2.63
UFD1-204ENST00000447868 YDJCA8MPS7 323 aa31.45■■■□□ 2.63
UFD1-204ENST00000447868 RAD17O75943 681 aa31.45■■■□□ 2.63
UFD1-204ENST00000447868 IPO8O15397 1037 aaKnown RBP31.44■■■□□ 2.62
UFD1-204ENST00000447868 CIAPIN1Q6FI81 312 aa31.44■■■□□ 2.62
UFD1-204ENST00000447868 TAF1DQ9H5J8 278 aaPredicted RBP31.44■■■□□ 2.62
UFD1-204ENST00000447868 G3V3G9 751 aa31.43■■■□□ 2.62
UFD1-204ENST00000447868 ECE2O60344 883 aa31.43■■■□□ 2.62
UFD1-204ENST00000447868 DCAF8Q5TAQ9 597 aa31.43■■■□□ 2.62
UFD1-204ENST00000447868 ANKRD44Q8N8A2 993 aa31.42■■■□□ 2.62
UFD1-204ENST00000447868 SMC1BQ8NDV3 1235 aa31.42■■■□□ 2.62
UFD1-204ENST00000447868 ANKRD2Q9GZV1 360 aa31.42■■■□□ 2.62
UFD1-204ENST00000447868 LMOD1P29536 600 aaPredicted RBP31.41■■■□□ 2.62
UFD1-204ENST00000447868 EPHX2P34913 555 aa31.41■■■□□ 2.62
UFD1-204ENST00000447868 CHRNDQ07001 517 aa31.41■■■□□ 2.62
UFD1-204ENST00000447868 TNIP1Q15025 636 aa31.41■■■□□ 2.62
UFD1-204ENST00000447868 TNNQ9UQP3 1299 aa31.41■■■□□ 2.62
UFD1-204ENST00000447868 POTEIP0CG38 1075 aa31.4■■■□□ 2.62
UFD1-204ENST00000447868 POTEJP0CG39 1038 aa31.4■■■□□ 2.62
UFD1-204ENST00000447868 TRIM27P14373 513 aa31.4■■■□□ 2.62
UFD1-204ENST00000447868 SCNN1DP51172 638 aa31.4■■■□□ 2.62
UFD1-204ENST00000447868 FSTL1Q12841 308 aa31.4■■■□□ 2.62
UFD1-204ENST00000447868 RABL6Q3YEC7 729 aaPredicted RBP31.4■■■□□ 2.62
UFD1-204ENST00000447868 EAPPQ56P03 285 aaPredicted RBP31.4■■■□□ 2.62
UFD1-204ENST00000447868 ATF7IPQ6VMQ6 1270 aa31.4■■■□□ 2.62
UFD1-204ENST00000447868 UBTFL1P0CB47 393 aaPredicted RBP31.39■■■□□ 2.62
UFD1-204ENST00000447868 LDHAL6AQ6ZMR3 332 aa31.39■■■□□ 2.62
UFD1-204ENST00000447868 HELBQ8NG08 1087 aaPredicted RBP31.39■■■□□ 2.62
UFD1-204ENST00000447868 KCNQ5Q9NR82 932 aa31.39■■■□□ 2.62
UFD1-204ENST00000447868 CNNM1Q9NRU3 951 aa31.39■■■□□ 2.62
UFD1-204ENST00000447868 LEMD3Q9Y2U8 911 aa31.39■■■□□ 2.62
UFD1-204ENST00000447868 GMPSP49915 693 aaPredicted RBP31.38■■■□□ 2.61
UFD1-204ENST00000447868 CLUAP1Q96AJ1 413 aa31.38■■■□□ 2.61
UFD1-204ENST00000447868 TAF5LO75529 589 aa31.37■■■□□ 2.61
UFD1-204ENST00000447868 HSPA6P17066 643 aa31.37■■■□□ 2.61
UFD1-204ENST00000447868 EPS15P42566 896 aa31.37■■■□□ 2.61
UFD1-204ENST00000447868 KCNJ4P48050 445 aa31.37■■■□□ 2.61
UFD1-204ENST00000447868 ZKSCAN2Q63HK3 967 aa31.37■■■□□ 2.61
UFD1-204ENST00000447868 INTS3Q68E01 1043 aaKnown RBP31.37■■■□□ 2.61
UFD1-204ENST00000447868 ZNF804BA4D1E1 1349 aa31.37■■■□□ 2.61
UFD1-204ENST00000447868 MED23Q9ULK4 1368 aa31.36■■■□□ 2.61
UFD1-204ENST00000447868 PSMD14O00487 310 aa31.36■■■□□ 2.61
UFD1-204ENST00000447868 A0A1B0GUL6 1792 aa31.35■■■□□ 2.61
UFD1-204ENST00000447868 SCN9AQ15858 1988 aa31.34■■■□□ 2.61
UFD1-204ENST00000447868 PLIN1O60240 522 aa31.34■■■□□ 2.61
UFD1-204ENST00000447868 MEIS3Q99687 375 aa31.34■■■□□ 2.61
UFD1-204ENST00000447868 PUS3Q9BZE2 481 aaKnown RBP31.34■■■□□ 2.61
UFD1-204ENST00000447868 GPRC5DQ9NZD1 345 aa31.34■■■□□ 2.61
UFD1-204ENST00000447868 SNAP23O00161 211 aa31.33■■■□□ 2.61
UFD1-204ENST00000447868 KLRK1P26718 216 aa31.33■■■□□ 2.61
UFD1-204ENST00000447868 CHADLQ6NUI6 762 aa31.33■■■□□ 2.61
UFD1-204ENST00000447868 PNMA8AQ86V59 439 aaPredicted RBP31.33■■■□□ 2.61
UFD1-204ENST00000447868 TXNRD3Q86VQ6 643 aa31.33■■■□□ 2.61
UFD1-204ENST00000447868 LDHDQ86WU2 507 aa31.33■■■□□ 2.61
UFD1-204ENST00000447868 CLEC11AQ9Y240 323 aa31.33■■■□□ 2.61
UFD1-204ENST00000447868 ZBTB12Q9Y330 459 aaPredicted RBP31.33■■■□□ 2.61
UFD1-204ENST00000447868 LRRFIP2Q9Y608 721 aaKnown RBP31.32■■■□□ 2.6
UFD1-204ENST00000447868 KLHDC4Q8TBB5 520 aa31.31■■■□□ 2.6
UFD1-204ENST00000447868 HDAC5Q9UQL6 1122 aa31.29■■■□□ 2.6
UFD1-204ENST00000447868 SHTN1A0MZ66 631 aa31.28■■■□□ 2.6
UFD1-204ENST00000447868 LRRC24Q50LG9 513 aa31.28■■■□□ 2.6
UFD1-204ENST00000447868 PODNQ7Z5L7 613 aa31.28■■■□□ 2.6
UFD1-204ENST00000447868 TMEM57Q8N5G2 664 aa31.28■■■□□ 2.6
UFD1-204ENST00000447868 CNOT7Q9UIV1 285 aaKnown RBP31.28■■■□□ 2.6
UFD1-204ENST00000447868 ADAMTSL1Q8N6G6 1762 aa31.28■■■□□ 2.6
UFD1-204ENST00000447868 GNAI3P08754 354 aa31.27■■■□□ 2.6
UFD1-204ENST00000447868 COA1Q9GZY4 146 aa31.27■■■□□ 2.6
UFD1-204ENST00000447868 ADARB2Q9NS39 739 aaKnown RBP31.27■■■□□ 2.6
UFD1-204ENST00000447868 RIPOR2Q9Y4F9 1068 aa31.27■■■□□ 2.6
UFD1-204ENST00000447868 VIL1P09327 827 aaKnown RBP31.26■■■□□ 2.59
UFD1-204ENST00000447868 USP50Q70EL3 339 aaPredicted RBP31.26■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms