RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 ZSCAN31Q96LW9 406 aaPredicted RBP23.38■■□□□ 1.33
FAM3A-215ENST00000447601 HELLSQ9NRZ9 838 aa23.38■■□□□ 1.33
FAM3A-215ENST00000447601 RIPOR2Q9Y4F9 1068 aa23.38■■□□□ 1.33
FAM3A-215ENST00000447601 U3KPZ7 1027 aaPredicted RBP23.38■■□□□ 1.33
FAM3A-215ENST00000447601 RREB1Q92766 1687 aa23.37■■□□□ 1.33
FAM3A-215ENST00000447601 CPA1P15085 419 aa23.37■■□□□ 1.33
FAM3A-215ENST00000447601 LRRFIP1Q32MZ4 808 aaKnown RBP23.37■■□□□ 1.33
FAM3A-215ENST00000447601 PARP10Q53GL7 1025 aa23.37■■□□□ 1.33
FAM3A-215ENST00000447601 TTC39AQ5SRH9 613 aa23.37■■□□□ 1.33
FAM3A-215ENST00000447601 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.37■■□□□ 1.33
FAM3A-215ENST00000447601 RIC1Q4ADV7 1423 aa23.37■■□□□ 1.33
FAM3A-215ENST00000447601 CAMTA2O94983 1202 aa23.36■■□□□ 1.33
FAM3A-215ENST00000447601 BRD1O95696 1058 aa23.36■■□□□ 1.33
FAM3A-215ENST00000447601 KRT32Q14532 448 aa23.36■■□□□ 1.33
FAM3A-215ENST00000447601 SH2B1Q9NRF2 756 aaPredicted RBP23.36■■□□□ 1.33
FAM3A-215ENST00000447601 ABCC12Q96J65 1359 aa23.36■■□□□ 1.33
FAM3A-215ENST00000447601 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
FAM3A-215ENST00000447601 FNBP4Q8N3X1 1017 aaPredicted RBP23.36■■□□□ 1.33
FAM3A-215ENST00000447601 GZF1Q9H116 711 aaPredicted RBP23.36■■□□□ 1.33
FAM3A-215ENST00000447601 CNNM1Q9NRU3 951 aa23.36■■□□□ 1.33
FAM3A-215ENST00000447601 KCNQ2O43526 872 aa23.35■■□□□ 1.33
FAM3A-215ENST00000447601 ATP2B3Q16720 1220 aa23.35■■□□□ 1.33
FAM3A-215ENST00000447601 MCTP1Q6DN14 999 aa23.35■■□□□ 1.33
FAM3A-215ENST00000447601 UTP14AQ9BVJ6 771 aaKnown RBP23.35■■□□□ 1.33
FAM3A-215ENST00000447601 SPEF2Q9C093 1822 aa23.35■■□□□ 1.33
FAM3A-215ENST00000447601 HSP90B1P14625 803 aaKnown RBP23.34■■□□□ 1.33
FAM3A-215ENST00000447601 ADORA1P30542 326 aa23.34■■□□□ 1.33
FAM3A-215ENST00000447601 ZMYM1Q5SVZ6 1142 aa23.34■■□□□ 1.33
FAM3A-215ENST00000447601 BLOC1S2Q6QNY1 142 aa23.34■■□□□ 1.33
FAM3A-215ENST00000447601 ANKRD1Q15327 319 aa23.33■■□□□ 1.33
FAM3A-215ENST00000447601 SUSD4Q5VX71 490 aa23.33■■□□□ 1.33
FAM3A-215ENST00000447601 SEC62Q99442 399 aaKnown RBP23.33■■□□□ 1.33
FAM3A-215ENST00000447601 NUP98P52948 1817 aa23.33■■□□□ 1.33
FAM3A-215ENST00000447601 SPATA31A6Q5VVP1 1343 aa23.33■■□□□ 1.32
FAM3A-215ENST00000447601 RNF113AO15541 343 aaKnown RBP23.33■■□□□ 1.32
FAM3A-215ENST00000447601 CCDC129Q6ZRS4 1044 aa23.33■■□□□ 1.32
FAM3A-215ENST00000447601 ALDH8A1Q9H2A2 487 aaPredicted RBP23.33■■□□□ 1.32
FAM3A-215ENST00000447601 L1TD1Q5T7N2 865 aaKnown RBP23.32■■□□□ 1.32
FAM3A-215ENST00000447601 ZNF652Q9Y2D9 606 aa23.32■■□□□ 1.32
FAM3A-215ENST00000447601 WDR33Q9C0J8 1336 aaKnown RBP23.31■■□□□ 1.32
FAM3A-215ENST00000447601 CHGBP05060 677 aa23.31■■□□□ 1.32
FAM3A-215ENST00000447601 RPS6KB1P23443 525 aa23.31■■□□□ 1.32
FAM3A-215ENST00000447601 FKBP4Q02790 459 aaKnown RBP eCLIP23.31■■□□□ 1.32
FAM3A-215ENST00000447601 DSCC1Q9BVC3 393 aa23.31■■□□□ 1.32
FAM3A-215ENST00000447601 ZFYP08048 801 aaPredicted RBP23.31■■□□□ 1.32
FAM3A-215ENST00000447601 KLHL40Q2TBA0 621 aa23.31■■□□□ 1.32
FAM3A-215ENST00000447601 VGLL2Q8N8G2 317 aa23.31■■□□□ 1.32
FAM3A-215ENST00000447601 ZNF512BQ96KM6 892 aaPredicted RBP23.3■■□□□ 1.32
FAM3A-215ENST00000447601 LARP6Q9BRS8 491 aaKnown RBP23.3■■□□□ 1.32
FAM3A-215ENST00000447601 SMC3Q9UQE7 1217 aa23.3■■□□□ 1.32
FAM3A-215ENST00000447601 MROH5Q6ZUA9 1318 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 PDE8BO95263 885 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 NIP7Q9Y221 180 aaKnown RBP eCLIP23.29■■□□□ 1.32
FAM3A-215ENST00000447601 DDX49Q9Y6V7 483 aaKnown RBP23.29■■□□□ 1.32
FAM3A-215ENST00000447601 LRP5O75197 1615 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 ZNF831Q5JPB2 1677 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 GOLGA6L3A6NEY3 463 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 LARGE1O95461 756 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 LMBRD1Q9NUN5 540 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 USP21Q9UK80 565 aa23.29■■□□□ 1.32
FAM3A-215ENST00000447601 ISY1Q9ULR0 285 aaKnown RBP23.29■■□□□ 1.32
FAM3A-215ENST00000447601 HCLS1P14317 486 aaPredicted RBP23.28■■□□□ 1.32
FAM3A-215ENST00000447601 CLEC4GQ6UXB4 293 aa23.28■■□□□ 1.32
FAM3A-215ENST00000447601 TAF6LQ9Y6J9 622 aa23.28■■□□□ 1.32
FAM3A-215ENST00000447601 MAST3O60307 1309 aa23.27■■□□□ 1.32
FAM3A-215ENST00000447601 FSD2A1L4K1 749 aa23.27■■□□□ 1.32
FAM3A-215ENST00000447601 NTSR2O95665 410 aa23.27■■□□□ 1.32
FAM3A-215ENST00000447601 CCDC83Q8IWF9 413 aa23.27■■□□□ 1.32
FAM3A-215ENST00000447601 NEK1Q96PY6 1258 aa23.27■■□□□ 1.32
FAM3A-215ENST00000447601 FAM177BA6PVY3 158 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 CYP21A2P08686 494 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 PUM3Q15397 648 aaKnown RBP23.26■■□□□ 1.31
FAM3A-215ENST00000447601 CCDC152Q4G0S7 254 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 FOXD4L5Q5VV16 416 aaPredicted RBP23.26■■□□□ 1.31
FAM3A-215ENST00000447601 LINC00116Q8NCU8 138 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 FOXD4L4Q8WXT5 416 aaPredicted RBP23.26■■□□□ 1.31
FAM3A-215ENST00000447601 TPCN1Q9ULQ1 816 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 MYH3P11055 1940 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 CNTNAP4Q9C0A0 1308 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 RGL2O15211 777 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 ZAP70P43403 619 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 SCARF1Q14162 830 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 ME3Q16798 604 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 RTL9Q8NET4 1388 aa23.26■■□□□ 1.31
FAM3A-215ENST00000447601 LPIN2Q92539 896 aa23.25■■□□□ 1.31
FAM3A-215ENST00000447601 HMGB1P09429 215 aaKnown RBP23.24■■□□□ 1.31
FAM3A-215ENST00000447601 HSPD1P10809 573 aaKnown RBP23.24■■□□□ 1.31
FAM3A-215ENST00000447601 SLFNL1Q499Z3 407 aa23.24■■□□□ 1.31
FAM3A-215ENST00000447601 MPHOSPH8Q99549 860 aa23.24■■□□□ 1.31
FAM3A-215ENST00000447601 COL5A3P25940 1745 aaPredicted RBP23.24■■□□□ 1.31
FAM3A-215ENST00000447601 UQCRFS1P1P0C7P4 283 aa23.24■■□□□ 1.31
FAM3A-215ENST00000447601 TTF1Q15361 905 aaPredicted RBP23.24■■□□□ 1.31
FAM3A-215ENST00000447601 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.24■■□□□ 1.316e-7■■■■□ 22.7
FAM3A-215ENST00000447601 PRPF40AO75400 957 aaKnown RBP23.23■■□□□ 1.31
FAM3A-215ENST00000447601 MCAMP43121 646 aa23.23■■□□□ 1.31
FAM3A-215ENST00000447601 TOB2Q14106 344 aaPredicted RBP23.23■■□□□ 1.31
FAM3A-215ENST00000447601 ZSCAN25Q6NSZ9 544 aa23.23■■□□□ 1.31
FAM3A-215ENST00000447601 APPBP2Q92624 585 aa23.23■■□□□ 1.31
FAM3A-215ENST00000447601 OSBP2Q969R2 916 aa23.23■■□□□ 1.31
FAM3A-215ENST00000447601 M0R2C6 588 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms