RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 OLFM4Q6UX06 510 aa22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 ATG9AQ7Z3C6 839 aa22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 CCDC136Q96JN2 1154 aa22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 BSDC1Q9NW68 430 aaPredicted RBP22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 NOP58Q9Y2X3 529 aaKnown RBP22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 ARFGEF1Q9Y6D6 1849 aa22.31■■□□□ 1.16
TRAPPC4-203ENST00000447216 DCTPP1Q9H773 170 aa22.3■■□□□ 1.16
TRAPPC4-203ENST00000447216 RIPOR2Q9Y4F9 1068 aa22.3■■□□□ 1.16
TRAPPC4-203ENST00000447216 HELBQ8NG08 1087 aaPredicted RBP22.29■■□□□ 1.16
TRAPPC4-203ENST00000447216 CIAO1O76071 339 aa22.28■■□□□ 1.16
TRAPPC4-203ENST00000447216 DALRD3Q5D0E6 543 aaKnown RBP22.28■■□□□ 1.16
TRAPPC4-203ENST00000447216 MINPP1Q9UNW1 487 aa22.28■■□□□ 1.16
TRAPPC4-203ENST00000447216 ATP6V0A2Q9Y487 856 aa22.28■■□□□ 1.16
TRAPPC4-203ENST00000447216 C21orf2O43822 256 aa22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 SASH1O94885 1247 aa22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 IL15P40933 162 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 CHRNDQ07001 517 aa22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 METTL24Q5JXM2 366 aa22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 FBXO3Q9UK99 471 aa22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC4-203ENST00000447216 SRCAPQ6ZRS2 3230 aa22.27■■□□□ 1.15
TRAPPC4-203ENST00000447216 LTBP1Q14766 1721 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 TFCP2Q12800 502 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 TMC4Q7Z404 712 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 SP8Q8IXZ3 490 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 C7orf43Q8WVR3 580 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 BCL11AQ9H165 835 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 BCS1LQ9Y276 419 aa22.26■■□□□ 1.15
TRAPPC4-203ENST00000447216 SMARCA5O60264 1052 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC4-203ENST00000447216 TAF5LO75529 589 aa22.25■■□□□ 1.15
TRAPPC4-203ENST00000447216 GPSM2P81274 684 aa22.25■■□□□ 1.15
TRAPPC4-203ENST00000447216 HSP90AB4PQ58FF6 505 aa22.25■■□□□ 1.15
TRAPPC4-203ENST00000447216 MROH5Q6ZUA9 1318 aa22.25■■□□□ 1.15
TRAPPC4-203ENST00000447216 RAB11FIP3O75154 756 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 SMC5Q8IY18 1101 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 RHPN1Q8TCX5 695 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 GCC1Q96CN9 775 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 CEP126Q9P2H0 1117 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 KDM2BQ8NHM5 1336 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 FER1L6Q2WGJ9 1857 aa22.24■■□□□ 1.15
TRAPPC4-203ENST00000447216 WTIPA6NIX2 430 aaPredicted RBP22.23■■□□□ 1.15
TRAPPC4-203ENST00000447216 SNAP23O00161 211 aa22.23■■□□□ 1.15
TRAPPC4-203ENST00000447216 ERC1Q8IUD2 1116 aa22.23■■□□□ 1.15
TRAPPC4-203ENST00000447216 VGLL2Q8N8G2 317 aa22.23■■□□□ 1.15
TRAPPC4-203ENST00000447216 IL1RAPL2Q9NP60 686 aa22.23■■□□□ 1.15
TRAPPC4-203ENST00000447216 PELP1Q8IZL8 1130 aaKnown RBP22.22■■□□□ 1.15
TRAPPC4-203ENST00000447216 KIF1BPQ96EK5 621 aa22.22■■□□□ 1.15
TRAPPC4-203ENST00000447216 ANKIB1Q9P2G1 1089 aa22.22■■□□□ 1.15
TRAPPC4-203ENST00000447216 NSFL1CQ9UNZ2 370 aaKnown RBP22.22■■□□□ 1.15
TRAPPC4-203ENST00000447216 CCDC88AQ3V6T2 1871 aa22.22■■□□□ 1.15
TRAPPC4-203ENST00000447216 DUOX1Q9NRD9 1551 aa22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 ANKRD45Q5TZF3 282 aa22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 CENPQQ7L2Z9 268 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 LRRCC1Q9C099 1032 aa22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 ANKRD2Q9GZV1 360 aa22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 TMX4Q9H1E5 349 aaPredicted RBP22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 XDHP47989 1333 aa22.21■■□□□ 1.15
TRAPPC4-203ENST00000447216 ARAP2Q8WZ64 1704 aa22.2■■□□□ 1.14
TRAPPC4-203ENST00000447216 PDE8BO95263 885 aa22.2■■□□□ 1.14
TRAPPC4-203ENST00000447216 CCDC93Q567U6 631 aa22.2■■□□□ 1.14
TRAPPC4-203ENST00000447216 MPNDQ8N594 471 aa22.2■■□□□ 1.14
TRAPPC4-203ENST00000447216 GPR101Q96P66 508 aaPredicted RBP22.2■■□□□ 1.14
TRAPPC4-203ENST00000447216 SNED1Q8TER0 1413 aa22.2■■□□□ 1.14
TRAPPC4-203ENST00000447216 DPP8Q6V1X1 898 aaPredicted RBP22.19■■□□□ 1.14
TRAPPC4-203ENST00000447216 ZNF609O15014 1411 aa22.19■■□□□ 1.14
TRAPPC4-203ENST00000447216 UFL1O94874 794 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 YBX3P16989 372 aaKnown RBP eCLIP22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 KCNJ4P48050 445 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 ATP2B3Q16720 1220 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 CC2D2BQ6DHV5 1058 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 PODXL2Q9NZ53 605 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 POLLQ9UGP5 575 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 GGA1Q9UJY5 639 aa22.18■■□□□ 1.14
TRAPPC4-203ENST00000447216 FGFR2P21802 821 aa22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 TIMM10P62072 90 aa22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 PUM3Q15397 648 aaKnown RBP22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 TNNI3KQ59H18 835 aa22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 TBC1D16Q8TBP0 767 aa22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 FPGT-TNNI3KV9GXZ4 949 aa22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 GOLGB1Q14789 3259 aaKnown RBP22.17■■□□□ 1.14
TRAPPC4-203ENST00000447216 ZNF804BA4D1E1 1349 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 C6orf229H3BNL8 230 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 ATP2B4P23634 1241 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 KLRK1P26718 216 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 NUCB1Q02818 461 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 SOGA3Q5TF21 947 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 AACSQ86V21 672 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 EAF2Q96CJ1 260 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 LNPKQ9C0E8 428 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 CCDC8Q9H0W5 538 aaPredicted RBP22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 LEMD3Q9Y2U8 911 aa22.16■■□□□ 1.14
TRAPPC4-203ENST00000447216 A0A1B0GUL7 405 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 ADORA1P30542 326 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 UBE4AQ14139 1066 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 C16orf71Q8IYS4 520 aaPredicted RBP22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 RTKN2Q8IZC4 609 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 CLASRPQ8N2M8 674 aaKnown RBP22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 NEUROD6Q96NK8 337 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 GPR108Q9NPR9 543 aa22.15■■□□□ 1.14
TRAPPC4-203ENST00000447216 ZBTB47Q9UFB7 747 aaPredicted RBP22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms