RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 SLC4A8Q2Y0W8 1093 aa16.98■□□□□ 0.31
ATRN-202ENST00000446916 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
ATRN-202ENST00000446916 SRRTQ9BXP5 876 aaKnown RBP16.98■□□□□ 0.31
ATRN-202ENST00000446916 ELF2Q15723 593 aa16.98■□□□□ 0.31
ATRN-202ENST00000446916 SETDB2Q96T68 719 aa16.98■□□□□ 0.31
ATRN-202ENST00000446916 ARHGEF28Q8N1W1 1705 aaKnown RBP16.98■□□□□ 0.31
ATRN-202ENST00000446916 HIP1O00291 1037 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 BEND3Q5T5X7 828 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 NEURL1BA8MQ27 555 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 HAND2P61296 217 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 NOC3LQ8WTT2 800 aaKnown RBP16.97■□□□□ 0.31
ATRN-202ENST00000446916 TNS3Q68CZ2 1445 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 SIRT2Q8IXJ6 389 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 NRBP1Q9UHY1 535 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 CYP46A1Q9Y6A2 500 aa16.97■□□□□ 0.31
ATRN-202ENST00000446916 ANKRD65E5RJM6 399 aa16.96■□□□□ 0.31
ATRN-202ENST00000446916 CCDC192P0DO97 292 aa16.96■□□□□ 0.31
ATRN-202ENST00000446916 SYNE3Q6ZMZ3 975 aa16.96■□□□□ 0.31
ATRN-202ENST00000446916 EDC3Q96F86 508 aaKnown RBP16.96■□□□□ 0.31
ATRN-202ENST00000446916 AKAP2Q9Y2D5 859 aa16.96■□□□□ 0.31
ATRN-202ENST00000446916 ISM2Q6H9L7 571 aa16.96■□□□□ 0.31
ATRN-202ENST00000446916 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.96■□□□□ 0.316e-6■■■□□ 16.7
ATRN-202ENST00000446916 GNL3LQ9NVN8 582 aaKnown RBP16.96■□□□□ 0.31
ATRN-202ENST00000446916 RTCBQ9Y3I0 505 aaKnown RBP16.96■□□□□ 0.31
ATRN-202ENST00000446916 BLOC1S2Q6QNY1 142 aa16.96■□□□□ 0.31
ATRN-202ENST00000446916 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.3
ATRN-202ENST00000446916 PDLIM2Q96JY6 352 aa16.95■□□□□ 0.3
ATRN-202ENST00000446916 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.39e-8■■□□□ 14
ATRN-202ENST00000446916 TFCP2L1Q9NZI6 479 aa16.95■□□□□ 0.3
ATRN-202ENST00000446916 SMIM5Q71RC9 77 aa16.95■□□□□ 0.3
ATRN-202ENST00000446916 DBNDD2Q9BQY9 259 aa16.95■□□□□ 0.3
ATRN-202ENST00000446916 DHX16O60231 1041 aaKnown RBP16.94■□□□□ 0.3
ATRN-202ENST00000446916 GTF2A1P52655 376 aaPredicted RBP16.94■□□□□ 0.3
ATRN-202ENST00000446916 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
ATRN-202ENST00000446916 CCDC34Q96HJ3 373 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 AK9Q5TCS8 1911 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 PSMA5P28066 241 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 BRPF1P55201 1214 aaPredicted RBP16.94■□□□□ 0.3
ATRN-202ENST00000446916 KIF24Q5T7B8 1368 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 C6orf229H3BNL8 230 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 GPS2Q13227 327 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 PTPN14Q15678 1187 aa16.94■□□□□ 0.3
ATRN-202ENST00000446916 UTP14AQ9BVJ6 771 aaKnown RBP16.94■□□□□ 0.3
ATRN-202ENST00000446916 MED14O60244 1454 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 TDO2P48775 406 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 HSP90AA4PQ58FG1 418 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 AIDAQ96BJ3 306 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 SIK1P57059 783 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 TPM4P67936 248 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 CCDC183Q5T5S1 534 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 RAB11FIP4Q86YS3 637 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 CPA1P15085 419 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 CEP135Q66GS9 1140 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 KIF2CQ99661 725 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 CCDC87Q9NVE4 849 aa16.93■□□□□ 0.3
ATRN-202ENST00000446916 MINDY4BA8MYZ0 360 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 KCNQ2O43526 872 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 AKAP17AQ02040 695 aaKnown RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 GUCY1B3Q02153 619 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 RPGRQ92834 1020 aaKnown RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 QTRT2Q9H974 415 aaKnown RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 LMAN1P49257 510 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 EVI5LQ96CN4 794 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 CDCA7Q9BWT1 371 aaPredicted RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 LRRC2Q9BYS8 371 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 ZNF215Q9UL58 517 aaPredicted RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 WDR33Q9C0J8 1336 aaKnown RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 TAF5LO75529 589 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 CPLX2Q6PUV4 134 aaKnown RBP16.92■□□□□ 0.3
ATRN-202ENST00000446916 CCDC73Q6ZRK6 1079 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 PDRG1Q9NUG6 133 aa16.92■□□□□ 0.3
ATRN-202ENST00000446916 DRC1Q96MC2 740 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 CLIP2Q9UDT6 1046 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 ERICH2A1L162 156 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 ITGA6P23229 1130 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 IL15P40933 162 aaPredicted RBP16.91■□□□□ 0.3
ATRN-202ENST00000446916 FAM193AP78312 1265 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
ATRN-202ENST00000446916 SLC5A1P13866 664 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 NCBP1Q09161 790 aaKnown RBP16.9■□□□□ 0.3
ATRN-202ENST00000446916 CAVIN4Q5BKX8 364 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 AMOTL1Q8IY63 956 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 CDC5LQ99459 802 aaKnown RBP16.9■□□□□ 0.3
ATRN-202ENST00000446916 FEZ1Q99689 392 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 NUP62CLQ9H1M0 184 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 HNRNPH2P55795 449 aaKnown RBP16.9■□□□□ 0.3
ATRN-202ENST00000446916 KRBA2Q6ZNG9 492 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 NECAB1Q8N987 351 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 ZNF622Q969S3 477 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATRN-202ENST00000446916 ESYT1Q9BSJ8 1104 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 ARGLU1Q9NWB6 273 aaPredicted RBP16.9■□□□□ 0.3
ATRN-202ENST00000446916 POLR1AO95602 1720 aaPredicted RBP16.9■□□□□ 0.3
ATRN-202ENST00000446916 A0A087WWV3 80 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 BIN1O00499 593 aa16.9■□□□□ 0.3
ATRN-202ENST00000446916 RBM5P52756 815 aaKnown RBP eCLIP16.9■□□□□ 0.3
ATRN-202ENST00000446916 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
ATRN-202ENST00000446916 CCDC82Q8N4S0 544 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms