RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 MYBBP1AQ9BQG0 1328 aaKnown RBP31.66■■■□□ 2.66
PMS1-214ENST00000446877 DGKZQ13574 1117 aa31.65■■■□□ 2.66
PMS1-214ENST00000446877 DUSP27Q5VZP5 1158 aa31.65■■■□□ 2.66
PMS1-214ENST00000446877 RIC3Q7Z5B4 369 aa31.65■■■□□ 2.66
PMS1-214ENST00000446877 CCDC102AQ96A19 550 aa31.65■■■□□ 2.66
PMS1-214ENST00000446877 ZIC5Q96T25 663 aa31.65■■■□□ 2.66
PMS1-214ENST00000446877 KCNQ5Q9NR82 932 aa31.65■■■□□ 2.66
PMS1-214ENST00000446877 EGFRP00533 1210 aa31.64■■■□□ 2.66
PMS1-214ENST00000446877 ADM5C9JUS6 153 aa31.62■■■□□ 2.65
PMS1-214ENST00000446877 GOLGA2Q08379 1002 aa31.62■■■□□ 2.65
PMS1-214ENST00000446877 ANKIB1Q9P2G1 1089 aa31.62■■■□□ 2.65
PMS1-214ENST00000446877 RTL9Q8NET4 1388 aa31.61■■■□□ 2.65
PMS1-214ENST00000446877 ZNF157P51786 506 aaPredicted RBP31.61■■■□□ 2.65
PMS1-214ENST00000446877 KIF4BQ2VIQ3 1234 aa31.61■■■□□ 2.65
PMS1-214ENST00000446877 SULF1Q8IWU6 871 aa31.61■■■□□ 2.65
PMS1-214ENST00000446877 VIL1P09327 827 aaKnown RBP31.6■■■□□ 2.65
PMS1-214ENST00000446877 ZBTB38Q8NAP3 1195 aaPredicted RBP31.6■■■□□ 2.65
PMS1-214ENST00000446877 PODXL2Q9NZ53 605 aa31.6■■■□□ 2.65
PMS1-214ENST00000446877 TAF1P21675 1872 aa31.59■■■□□ 2.65
PMS1-214ENST00000446877 UFL1O94874 794 aa31.59■■■□□ 2.65
PMS1-214ENST00000446877 ADAMTS8Q9UP79 889 aa31.59■■■□□ 2.65
PMS1-214ENST00000446877 LRRC37AA6NMS7 1700 aa31.58■■■□□ 2.65
PMS1-214ENST00000446877 FAM155AB1AL88 458 aaPredicted RBP31.58■■■□□ 2.65
PMS1-214ENST00000446877 KIF23Q02241 960 aaPredicted RBP31.58■■■□□ 2.65
PMS1-214ENST00000446877 MBIPQ9NS73 344 aa31.58■■■□□ 2.65
PMS1-214ENST00000446877 GGA1Q9UJY5 639 aa31.58■■■□□ 2.65
PMS1-214ENST00000446877 DDX10Q13206 875 aaKnown RBP31.57■■■□□ 2.64
PMS1-214ENST00000446877 SEC31BQ9NQW1 1179 aa31.57■■■□□ 2.64
PMS1-214ENST00000446877 SAGE1Q9NXZ1 904 aa31.57■■■□□ 2.64
PMS1-214ENST00000446877 CCDC152Q4G0S7 254 aa31.56■■■□□ 2.64
PMS1-214ENST00000446877 GGA3Q9NZ52 723 aa31.56■■■□□ 2.64
PMS1-214ENST00000446877 MYD88Q99836 296 aa31.55■■■□□ 2.64
PMS1-214ENST00000446877 DDX60Q8IY21 1712 aaKnown RBP31.55■■■□□ 2.64
PMS1-214ENST00000446877 SLC34A2O95436 690 aa31.54■■■□□ 2.64
PMS1-214ENST00000446877 CCDC191Q8NCU4 936 aa31.53■■■□□ 2.64
PMS1-214ENST00000446877 AGBL3Q8NEM8 1001 aa31.53■■■□□ 2.64
PMS1-214ENST00000446877 CASP8AP2Q9UKL3 1982 aa31.52■■■□□ 2.64
PMS1-214ENST00000446877 RSBN1LQ6PCB5 846 aaPredicted RBP31.52■■■□□ 2.64
PMS1-214ENST00000446877 CDCA5Q96FF9 252 aa31.52■■■□□ 2.64
PMS1-214ENST00000446877 PHAXQ9H814 394 aaKnown RBP31.52■■■□□ 2.64
PMS1-214ENST00000446877 ELL2O00472 640 aaPredicted RBP31.51■■■□□ 2.63
PMS1-214ENST00000446877 PDE8AO60658 829 aa31.51■■■□□ 2.63
PMS1-214ENST00000446877 TRPA1O75762 1119 aa31.51■■■□□ 2.63
PMS1-214ENST00000446877 PCCAP05165 728 aaPredicted RBP31.51■■■□□ 2.63
PMS1-214ENST00000446877 CALD1Q05682 793 aaKnown RBP31.51■■■□□ 2.63
PMS1-214ENST00000446877 SCARF1Q14162 830 aa31.51■■■□□ 2.63
PMS1-214ENST00000446877 CWC25Q9NXE8 425 aaPredicted RBP31.51■■■□□ 2.63
PMS1-214ENST00000446877 RNF186Q9NXI6 227 aa31.51■■■□□ 2.63
PMS1-214ENST00000446877 ZNF280AP59817 542 aaPredicted RBP31.5■■■□□ 2.63
PMS1-214ENST00000446877 CCDC85AQ96PX6 553 aaPredicted RBP31.5■■■□□ 2.63
PMS1-214ENST00000446877 ASTN2O75129 1339 aaPredicted RBP31.49■■■□□ 2.63
PMS1-214ENST00000446877 SLC10A3P09131 477 aa31.49■■■□□ 2.63
PMS1-214ENST00000446877 ZNF853P0CG23 659 aa31.49■■■□□ 2.63
PMS1-214ENST00000446877 GNAI1P63096 354 aa31.49■■■□□ 2.63
PMS1-214ENST00000446877 ANGEL2Q5VTE6 544 aaKnown RBP31.49■■■□□ 2.63
PMS1-214ENST00000446877 ANKRD18AQ8IVF6 992 aa31.49■■■□□ 2.63
PMS1-214ENST00000446877 CHMP4AQ9BY43 222 aa31.49■■■□□ 2.63
PMS1-214ENST00000446877 IFT57Q9NWB7 429 aa31.49■■■□□ 2.63
PMS1-214ENST00000446877 DDX58O95786 925 aaKnown RBP31.48■■■□□ 2.63
PMS1-214ENST00000446877 REM2Q8IYK8 340 aaPredicted RBP31.48■■■□□ 2.63
PMS1-214ENST00000446877 XDHP47989 1333 aa31.48■■■□□ 2.63
PMS1-214ENST00000446877 USP17L8P0C7I0 530 aa31.47■■■□□ 2.63
PMS1-214ENST00000446877 JARID2Q92833 1246 aaPredicted RBP31.47■■■□□ 2.63
PMS1-214ENST00000446877 CSRNP1Q96S65 589 aa31.47■■■□□ 2.63
PMS1-214ENST00000446877 COL4A1P02462 1669 aa31.47■■■□□ 2.63
PMS1-214ENST00000446877 ATP2B4P23634 1241 aa31.46■■■□□ 2.63
PMS1-214ENST00000446877 FKBP1BP68106 108 aa31.45■■■□□ 2.63
PMS1-214ENST00000446877 PODNQ7Z5L7 613 aa31.45■■■□□ 2.63
PMS1-214ENST00000446877 METTL22Q9BUU2 404 aaPredicted RBP31.45■■■□□ 2.63
PMS1-214ENST00000446877 MYOZ2Q9NPC6 264 aa31.45■■■□□ 2.63
PMS1-214ENST00000446877 USP17L3A6NCW0 530 aa31.44■■■□□ 2.62
PMS1-214ENST00000446877 USP17L4A6NCW7 530 aa31.44■■■□□ 2.62
PMS1-214ENST00000446877 USP17L1Q7RTZ2 530 aa31.44■■■□□ 2.62
PMS1-214ENST00000446877 APAF1O14727 1248 aa31.43■■■□□ 2.62
PMS1-214ENST00000446877 CDC5LQ99459 802 aaKnown RBP31.43■■■□□ 2.62
PMS1-214ENST00000446877 CCDC30Q5VVM6 783 aa31.42■■■□□ 2.62
PMS1-214ENST00000446877 GMLQ99445 158 aa31.42■■■□□ 2.62
PMS1-214ENST00000446877 ZNF609O15014 1411 aa31.41■■■□□ 2.62
PMS1-214ENST00000446877 C8orf58Q8NAV2 365 aa31.41■■■□□ 2.62
PMS1-214ENST00000446877 PITPNM2Q9BZ72 1349 aa31.41■■■□□ 2.62
PMS1-214ENST00000446877 POLR2AP24928 1970 aaKnown RBP31.4■■■□□ 2.62
PMS1-214ENST00000446877 RASAL3Q86YV0 1011 aa31.4■■■□□ 2.62
PMS1-214ENST00000446877 MAP3K2Q9Y2U5 619 aa31.39■■■□□ 2.62
PMS1-214ENST00000446877 CTSWP56202 376 aa31.38■■■□□ 2.61
PMS1-214ENST00000446877 CTU1Q7Z7A3 348 aaKnown RBP31.38■■■□□ 2.61
PMS1-214ENST00000446877 OGFOD1Q8N543 542 aa31.38■■■□□ 2.61
PMS1-214ENST00000446877 SCN9AQ15858 1988 aa31.37■■■□□ 2.61
PMS1-214ENST00000446877 BSDC1Q9NW68 430 aaPredicted RBP31.36■■■□□ 2.61
PMS1-214ENST00000446877 SOX10P56693 466 aa31.35■■■□□ 2.61
PMS1-214ENST00000446877 NEXNQ0ZGT2 675 aa31.35■■■□□ 2.61
PMS1-214ENST00000446877 KSR2Q6VAB6 950 aa31.35■■■□□ 2.61
PMS1-214ENST00000446877 FBXW7Q969H0 707 aa31.35■■■□□ 2.61
PMS1-214ENST00000446877 MINPP1Q9UNW1 487 aa31.35■■■□□ 2.61
PMS1-214ENST00000446877 TTLL12Q14166 644 aaPredicted RBP31.34■■■□□ 2.61
PMS1-214ENST00000446877 TTLL11Q8NHH1 800 aa31.34■■■□□ 2.61
PMS1-214ENST00000446877 SCAF8Q9UPN6 1271 aaKnown RBP31.34■■■□□ 2.61
PMS1-214ENST00000446877 PI4KAP2A4QPH2 592 aa31.33■■■□□ 2.61
PMS1-214ENST00000446877 UBE2Q2LH0YL09 131 aa31.33■■■□□ 2.61
PMS1-214ENST00000446877 NBPF9Q3BBW0 867 aa31.33■■■□□ 2.61
PMS1-214ENST00000446877 MOB2Q70IA6 237 aa31.33■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms