RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 ATP2B4P23634 1241 aa17.56■□□□□ 0.4
SSBP3-208ENST00000444533 YY1P25490 414 aa17.56■□□□□ 0.4
SSBP3-208ENST00000444533 ZNF277Q9NRM2 450 aaPredicted RBP17.56■□□□□ 0.4
SSBP3-208ENST00000444533 PPIP5K2O43314 1243 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 UFL1O94874 794 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 IARSP41252 1262 aaKnown RBP17.55■□□□□ 0.4
SSBP3-208ENST00000444533 GPSM2P81274 684 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 LARGE2Q8N3Y3 721 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 PODXL2Q9NZ53 605 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 MINPP1Q9UNW1 487 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 CHD4Q14839 1912 aa17.55■□□□□ 0.4
SSBP3-208ENST00000444533 MROH5Q6ZUA9 1318 aa17.54■□□□□ 0.4
SSBP3-208ENST00000444533 ZC3H4Q9UPT8 1303 aaKnown RBP17.54■□□□□ 0.4
SSBP3-208ENST00000444533 WASHC4Q2M389 1173 aa17.54■□□□□ 0.4
SSBP3-208ENST00000444533 ZNF594Q96JF6 807 aaPredicted RBP17.54■□□□□ 0.4
SSBP3-208ENST00000444533 RTFDC1Q9BY42 306 aaPredicted RBP17.54■□□□□ 0.4
SSBP3-208ENST00000444533 ZC3H12CQ9C0D7 883 aaKnown RBP17.54■□□□□ 0.4
SSBP3-208ENST00000444533 FBXO3Q9UK99 471 aa17.54■□□□□ 0.4
SSBP3-208ENST00000444533 TAF1P21675 1872 aa17.54■□□□□ 0.4
SSBP3-208ENST00000444533 FER1L6Q2WGJ9 1857 aa17.54■□□□□ 0.4
SSBP3-208ENST00000444533 CHRNDQ07001 517 aa17.53■□□□□ 0.4
SSBP3-208ENST00000444533 DPY19L2Q6NUT2 758 aa17.53■□□□□ 0.4
SSBP3-208ENST00000444533 NIM1KQ8IY84 436 aa17.53■□□□□ 0.4
SSBP3-208ENST00000444533 LEMD3Q9Y2U8 911 aa17.53■□□□□ 0.4
SSBP3-208ENST00000444533 HMMRO75330 724 aa17.52■□□□□ 0.4
SSBP3-208ENST00000444533 MTX1Q13505 466 aa17.52■□□□□ 0.4
SSBP3-208ENST00000444533 METTL24Q5JXM2 366 aa17.52■□□□□ 0.4
SSBP3-208ENST00000444533 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
SSBP3-208ENST00000444533 TBC1D16Q8TBP0 767 aa17.52■□□□□ 0.4
SSBP3-208ENST00000444533 SUPT16HQ9Y5B9 1047 aaKnown RBP17.52■□□□□ 0.4
SSBP3-208ENST00000444533 LRRC37AA6NMS7 1700 aa17.51■□□□□ 0.39
SSBP3-208ENST00000444533 CENPBP07199 599 aaPredicted RBP17.51■□□□□ 0.39
SSBP3-208ENST00000444533 AOC3Q16853 763 aa17.51■□□□□ 0.39
SSBP3-208ENST00000444533 C1orf115Q9H7X2 142 aa17.51■□□□□ 0.39
SSBP3-208ENST00000444533 UTRNP46939 3433 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 SPEF2Q9C093 1822 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 EYA2O00167 538 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 CIAO1O76071 339 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 EIF6P56537 245 aaKnown RBP17.5■□□□□ 0.39
SSBP3-208ENST00000444533 ATP8B2P98198 1209 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 KIAA2012Q0VF49 1180 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 G3BP1Q13283 466 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSBP3-208ENST00000444533 OS9Q13438 667 aaPredicted RBP17.5■□□□□ 0.39
SSBP3-208ENST00000444533 SIL1Q9H173 461 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 ZBTB40Q9NUA8 1239 aa17.5■□□□□ 0.39
SSBP3-208ENST00000444533 ZNF804BA4D1E1 1349 aa17.49■□□□□ 0.39
SSBP3-208ENST00000444533 RIMBP2O15034 1052 aa17.49■□□□□ 0.39
SSBP3-208ENST00000444533 IL15P40933 162 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-208ENST00000444533 PTPN12Q05209 780 aaKnown RBP17.49■□□□□ 0.39
SSBP3-208ENST00000444533 RPAP2Q8IXW5 612 aaPredicted RBP17.49■□□□□ 0.39
SSBP3-208ENST00000444533 KLHDC4Q8TBB5 520 aa17.49■□□□□ 0.39
SSBP3-208ENST00000444533 COPRSQ9NQ92 184 aa17.49■□□□□ 0.39
SSBP3-208ENST00000444533 CEP126Q9P2H0 1117 aa17.49■□□□□ 0.39
SSBP3-208ENST00000444533 POLLQ9UGP5 575 aa17.49■□□□□ 0.39
SSBP3-208ENST00000444533 KDM2BQ8NHM5 1336 aa17.48■□□□□ 0.39
SSBP3-208ENST00000444533 SNED1Q8TER0 1413 aa17.48■□□□□ 0.39
SSBP3-208ENST00000444533 HELBQ8NG08 1087 aaPredicted RBP17.48■□□□□ 0.39
SSBP3-208ENST00000444533 RIPOR2Q9Y4F9 1068 aa17.48■□□□□ 0.39
SSBP3-208ENST00000444533 TAF5LO75529 589 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
SSBP3-208ENST00000444533 AAMPQ13685 434 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 UBE4AQ14139 1066 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 LRRC24Q50LG9 513 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 CEP85Q6P2H3 762 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 PUS3Q9BZE2 481 aaKnown RBP17.47■□□□□ 0.39
SSBP3-208ENST00000444533 ZNRF3Q9ULT6 936 aa17.47■□□□□ 0.39
SSBP3-208ENST00000444533 SBF1O95248 1867 aa17.46■□□□□ 0.39
SSBP3-208ENST00000444533 MED23Q9ULK4 1368 aa17.46■□□□□ 0.39
SSBP3-208ENST00000444533 PNMA6EA0A0J9YXQ4 647 aa17.46■□□□□ 0.39
SSBP3-208ENST00000444533 IFIT1P09914 478 aaKnown RBP17.46■□□□□ 0.39
SSBP3-208ENST00000444533 PUM3Q15397 648 aaKnown RBP17.46■□□□□ 0.39
SSBP3-208ENST00000444533 SLC51AQ86UW1 340 aa17.46■□□□□ 0.39
SSBP3-208ENST00000444533 VPS37DQ86XT2 251 aa17.46■□□□□ 0.39
SSBP3-208ENST00000444533 PA2G4Q9UQ80 394 aaKnown RBP17.46■□□□□ 0.39
SSBP3-208ENST00000444533 COL4A1P02462 1669 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
SSBP3-208ENST00000444533 PDE8BO95263 885 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 TNIP1Q15025 636 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 CAVIN4Q5BKX8 364 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 ZNF804AQ7Z570 1209 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 SSH3Q8TE77 659 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 AKAP2Q9Y2D5 859 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 CCDC88AQ3V6T2 1871 aa17.45■□□□□ 0.38
SSBP3-208ENST00000444533 SLC5A1P13866 664 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 PRELPP51888 382 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 POLA2Q14181 598 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 ERC1Q8IUD2 1116 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 CRBNQ96SW2 442 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 COA1Q9GZY4 146 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 DBNDD1Q9H9R9 158 aa17.44■□□□□ 0.38
SSBP3-208ENST00000444533 GPBP1L1Q9HC44 474 aaPredicted RBP17.44■□□□□ 0.38
SSBP3-208ENST00000444533 DICER1Q9UPY3 1922 aaKnown RBP17.43■□□□□ 0.38
SSBP3-208ENST00000444533 GLTPD2A6NH11 291 aa17.43■□□□□ 0.38
SSBP3-208ENST00000444533 FZD9O00144 591 aa17.43■□□□□ 0.38
SSBP3-208ENST00000444533 ECE2O60344 883 aa17.43■□□□□ 0.38
SSBP3-208ENST00000444533 DOK7Q18PE1 504 aa17.43■□□□□ 0.38
SSBP3-208ENST00000444533 PODNQ7Z5L7 613 aa17.43■□□□□ 0.38
SSBP3-208ENST00000444533 ZNF526Q8TF50 670 aaPredicted RBP17.43■□□□□ 0.38
SSBP3-208ENST00000444533 LPIN2Q92539 896 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms