RNA–Protein interactions for RNA: ENST00000444166.1

COMMD1-203, Transcript of copper metabolism domain containing 1, humanhuman

TSL 3

Gene COMMD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-203ENST00000444166 HSP90AB3PQ58FF7 597 aa13.32□□□□□ -0.28
COMMD1-203ENST00000444166 CELF1Q92879 486 aaKnown RBP13.32□□□□□ -0.28
COMMD1-203ENST00000444166 TRMT112Q9UI30 125 aaKnown RBP13.32□□□□□ -0.28
COMMD1-203ENST00000444166 NSFL1CQ9UNZ2 370 aaKnown RBP13.32□□□□□ -0.28
COMMD1-203ENST00000444166 CENPFP49454 3210 aa13.32□□□□□ -0.28
COMMD1-203ENST00000444166 GPR25O00155 361 aa13.31□□□□□ -0.28
COMMD1-203ENST00000444166 GPSM2P81274 684 aa13.31□□□□□ -0.28
COMMD1-203ENST00000444166 TCIRG1Q13488 830 aa13.31□□□□□ -0.28
COMMD1-203ENST00000444166 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
COMMD1-203ENST00000444166 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
COMMD1-203ENST00000444166 ANGEL2Q5VTE6 544 aaKnown RBP13.31□□□□□ -0.28
COMMD1-203ENST00000444166 PLEKHF1Q96S99 279 aa13.31□□□□□ -0.28
COMMD1-203ENST00000444166 TRIOBPQ9H2D6 2365 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 TM4SF4P48230 202 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 MOB2Q70IA6 237 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 COPS6Q7L5N1 327 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 TBC1D16Q8TBP0 767 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 PITPNM2Q9BZ72 1349 aa13.3□□□□□ -0.28
COMMD1-203ENST00000444166 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
COMMD1-203ENST00000444166 SCARF1Q14162 830 aa13.29□□□□□ -0.28
COMMD1-203ENST00000444166 NFE2L2Q16236 605 aa13.29□□□□□ -0.28
COMMD1-203ENST00000444166 XAGE3Q8WTP9 111 aa13.29□□□□□ -0.28
COMMD1-203ENST00000444166 GMLQ99445 158 aa13.29□□□□□ -0.28
COMMD1-203ENST00000444166 EYA3Q99504 573 aa13.29□□□□□ -0.28
COMMD1-203ENST00000444166 PSME4Q14997 1843 aa13.28□□□□□ -0.28
COMMD1-203ENST00000444166 AGBL3Q8NEM8 1001 aa13.28□□□□□ -0.28
COMMD1-203ENST00000444166 NECTIN2Q92692 538 aa13.28□□□□□ -0.28
COMMD1-203ENST00000444166 PODXL2Q9NZ53 605 aa13.28□□□□□ -0.28
COMMD1-203ENST00000444166 BRCA2P51587 3418 aa13.28□□□□□ -0.28
COMMD1-203ENST00000444166 UBE2Q2LH0YL09 131 aa13.27□□□□□ -0.29
COMMD1-203ENST00000444166 FXR1P51114 621 aaKnown RBP eCLIP13.27□□□□□ -0.29
COMMD1-203ENST00000444166 RSBN1LQ6PCB5 846 aaPredicted RBP13.27□□□□□ -0.29
COMMD1-203ENST00000444166 R3HDMLQ9H3Y0 253 aa13.27□□□□□ -0.29
COMMD1-203ENST00000444166 TSPYL4Q9UJ04 414 aa13.27□□□□□ -0.29
COMMD1-203ENST00000444166 FKTNO75072 461 aa13.26□□□□□ -0.29
COMMD1-203ENST00000444166 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
COMMD1-203ENST00000444166 ZNF428Q96B54 188 aa13.26□□□□□ -0.29
COMMD1-203ENST00000444166 ISCA1Q9BUE6 129 aa13.26□□□□□ -0.29
COMMD1-203ENST00000444166 ZC3H12CQ9C0D7 883 aaKnown RBP13.26□□□□□ -0.29
COMMD1-203ENST00000444166 POTEFA5A3E0 1075 aa13.25□□□□□ -0.29
COMMD1-203ENST00000444166 NEFMP07197 916 aa13.25□□□□□ -0.29
COMMD1-203ENST00000444166 USP17L8P0C7I0 530 aa13.25□□□□□ -0.29
COMMD1-203ENST00000444166 RPS8P62241 208 aaKnown RBP13.25□□□□□ -0.29
COMMD1-203ENST00000444166 FAM89AQ96GI7 184 aa13.25□□□□□ -0.29
COMMD1-203ENST00000444166 MYOZ2Q9NPC6 264 aa13.25□□□□□ -0.29
COMMD1-203ENST00000444166 BABAM1Q9NWV8 329 aa13.25□□□□□ -0.29
COMMD1-203ENST00000444166 RBBP6Q7Z6E9 1792 aaKnown RBP13.25□□□□□ -0.29
COMMD1-203ENST00000444166 CUL9Q8IWT3 2517 aa13.24□□□□□ -0.29
COMMD1-203ENST00000444166 SREBF2Q12772 1141 aa13.24□□□□□ -0.29
COMMD1-203ENST00000444166 PRAMEF18Q5VWM3 479 aa13.24□□□□□ -0.29
COMMD1-203ENST00000444166 SCAF8Q9UPN6 1271 aaKnown RBP13.24□□□□□ -0.29
COMMD1-203ENST00000444166 SZT2Q5T011 3432 aa13.23□□□□□ -0.29
COMMD1-203ENST00000444166 UFL1O94874 794 aa13.23□□□□□ -0.29
COMMD1-203ENST00000444166 INTS3Q68E01 1043 aaKnown RBP13.23□□□□□ -0.29
COMMD1-203ENST00000444166 PLBD2Q8NHP8 589 aa13.23□□□□□ -0.29
COMMD1-203ENST00000444166 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
COMMD1-203ENST00000444166 MKRN3Q13064 507 aaKnown RBP13.22□□□□□ -0.29
COMMD1-203ENST00000444166 TRIM28Q13263 835 aaKnown RBP13.22□□□□□ -0.29
COMMD1-203ENST00000444166 NBPF9Q3BBW0 867 aa13.22□□□□□ -0.29
COMMD1-203ENST00000444166 GGA1Q9UJY5 639 aa13.22□□□□□ -0.29
COMMD1-203ENST00000444166 A0A0C4DFX4 3053 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 USP17L3A6NCW0 530 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 USP17L4A6NCW7 530 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 ATP5J2-PTCD1G3V325 749 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 IRS4O14654 1257 aaPredicted RBP13.21□□□□□ -0.29
COMMD1-203ENST00000444166 PTPN12Q05209 780 aaKnown RBP13.21□□□□□ -0.29
COMMD1-203ENST00000444166 LDLRAD1Q5T700 205 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 USP17L1Q7RTZ2 530 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 SEC31BQ9NQW1 1179 aa13.21□□□□□ -0.29
COMMD1-203ENST00000444166 ZNF646O15015 1829 aaPredicted RBP13.2□□□□□ -0.3
COMMD1-203ENST00000444166 G3V3G9 751 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 ALDH1A1P00352 501 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 TTLL12Q14166 644 aaPredicted RBP13.2□□□□□ -0.3
COMMD1-203ENST00000444166 KRT24Q2M2I5 525 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 DCAF8Q5TAQ9 597 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 ANKRD13DQ6ZTN6 518 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 ARMC5Q96C12 935 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 CHPF2Q9P2E5 772 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 ANKIB1Q9P2G1 1089 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 TRIM17Q9Y577 477 aa13.2□□□□□ -0.3
COMMD1-203ENST00000444166 WNT10BO00744 389 aa13.19□□□□□ -0.3
COMMD1-203ENST00000444166 RTL5Q5HYW3 569 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-203ENST00000444166 XDHP47989 1333 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 MAPK8IP3Q9UPT6 1336 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 LAMB1P07942 1786 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 NF2P35240 595 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 DACT2Q5SW24 774 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 IFNL1Q8IU54 200 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 PTPN22Q9Y2R2 807 aa13.18□□□□□ -0.3
COMMD1-203ENST00000444166 EN2P19622 333 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-203ENST00000444166 RIPK4P57078 832 aa13.17□□□□□ -0.3
COMMD1-203ENST00000444166 ARMC9Q7Z3E5 817 aa13.17□□□□□ -0.3
COMMD1-203ENST00000444166 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-203ENST00000444166 CCER1Q8TC90 406 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-203ENST00000444166 MXD3Q9BW11 206 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms