RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 DBNDD1Q9H9R9 158 aa25.93■■□□□ 1.74
UBE2D4-205ENST00000443780 GPRC5DQ9NZD1 345 aa25.93■■□□□ 1.74
UBE2D4-205ENST00000443780 GGA1Q9UJY5 639 aa25.93■■□□□ 1.74
UBE2D4-205ENST00000443780 CSF1RP07333 972 aa25.92■■□□□ 1.74
UBE2D4-205ENST00000443780 GMPSP49915 693 aaPredicted RBP25.92■■□□□ 1.74
UBE2D4-205ENST00000443780 KLRG1Q96E93 195 aa25.92■■□□□ 1.74
UBE2D4-205ENST00000443780 ZC3H12CQ9C0D7 883 aaKnown RBP25.92■■□□□ 1.74
UBE2D4-205ENST00000443780 BSDC1Q9NW68 430 aaPredicted RBP25.92■■□□□ 1.74
UBE2D4-205ENST00000443780 XDHP47989 1333 aa25.91■■□□□ 1.74
UBE2D4-205ENST00000443780 ITGBL1O95965 494 aaPredicted RBP25.91■■□□□ 1.74
UBE2D4-205ENST00000443780 MRPL50Q8N5N7 158 aaKnown RBP25.91■■□□□ 1.74
UBE2D4-205ENST00000443780 PSME4Q14997 1843 aa25.91■■□□□ 1.74
UBE2D4-205ENST00000443780 PASKQ96RG2 1323 aa25.9■■□□□ 1.74
UBE2D4-205ENST00000443780 ECE2O60344 883 aa25.9■■□□□ 1.74
UBE2D4-205ENST00000443780 DOK7Q18PE1 504 aa25.9■■□□□ 1.74
UBE2D4-205ENST00000443780 USP50Q70EL3 339 aaPredicted RBP25.9■■□□□ 1.74
UBE2D4-205ENST00000443780 TRMT2AQ8IZ69 625 aaKnown RBP25.9■■□□□ 1.74
UBE2D4-205ENST00000443780 BCL2L13Q9BXK5 485 aa25.9■■□□□ 1.74
UBE2D4-205ENST00000443780 ALDH1L1O75891 902 aa25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 ITGA6P23229 1130 aa25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 FAM161AQ3B820 660 aa25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 MAP1SQ66K74 1059 aaPredicted RBP25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 SLC4A10Q6U841 1118 aa25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 ADARB2Q9NS39 739 aaKnown RBP25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 MINPP1Q9UNW1 487 aa25.89■■□□□ 1.74
UBE2D4-205ENST00000443780 GRM8O00222 908 aa25.88■■□□□ 1.73
UBE2D4-205ENST00000443780 ATP2B4P23634 1241 aa25.88■■□□□ 1.73
UBE2D4-205ENST00000443780 CNTROBQ8N137 903 aa25.88■■□□□ 1.73
UBE2D4-205ENST00000443780 SSH1Q8WYL5 1049 aa25.88■■□□□ 1.73
UBE2D4-205ENST00000443780 SRCIN1Q9C0H9 1055 aa25.88■■□□□ 1.73
UBE2D4-205ENST00000443780 PSMD14O00487 310 aa25.87■■□□□ 1.73
UBE2D4-205ENST00000443780 IGHMBP2P38935 993 aaKnown RBP25.87■■□□□ 1.73
UBE2D4-205ENST00000443780 FOXO4P98177 505 aa25.87■■□□□ 1.73
UBE2D4-205ENST00000443780 KCNQ5Q9NR82 932 aa25.87■■□□□ 1.73
UBE2D4-205ENST00000443780 TRPM7Q96QT4 1865 aa25.86■■□□□ 1.73
UBE2D4-205ENST00000443780 DIEXFQ68CQ4 756 aaKnown RBP25.86■■□□□ 1.73
UBE2D4-205ENST00000443780 CREBZFQ9NS37 354 aa25.86■■□□□ 1.73
UBE2D4-205ENST00000443780 C9orf78Q9NZ63 289 aaPredicted RBP25.86■■□□□ 1.73
UBE2D4-205ENST00000443780 POLR2AP24928 1970 aaKnown RBP25.86■■□□□ 1.73
UBE2D4-205ENST00000443780 G3V3G9 751 aa25.85■■□□□ 1.73
UBE2D4-205ENST00000443780 DCAF8Q5TAQ9 597 aa25.85■■□□□ 1.73
UBE2D4-205ENST00000443780 CNOT7Q9UIV1 285 aaKnown RBP25.85■■□□□ 1.73
UBE2D4-205ENST00000443780 ZBTB12Q9Y330 459 aaPredicted RBP25.85■■□□□ 1.73
UBE2D4-205ENST00000443780 PTPRCP08575 1304 aa25.85■■□□□ 1.73
UBE2D4-205ENST00000443780 WTIPA6NIX2 430 aaPredicted RBP25.84■■□□□ 1.73
UBE2D4-205ENST00000443780 DPF2Q92785 391 aa25.84■■□□□ 1.73
UBE2D4-205ENST00000443780 MPHOSPH8Q99549 860 aa25.84■■□□□ 1.73
UBE2D4-205ENST00000443780 A0A1B0GUL6 1792 aa25.84■■□□□ 1.73
UBE2D4-205ENST00000443780 ANKRD18BA2A2Z9 1011 aa25.83■■□□□ 1.73
UBE2D4-205ENST00000443780 CCT4P50991 539 aaKnown RBP25.83■■□□□ 1.73
UBE2D4-205ENST00000443780 ALDH1L2Q3SY69 923 aa25.83■■□□□ 1.73
UBE2D4-205ENST00000443780 EPHA10Q5JZY3 1008 aa25.83■■□□□ 1.73
UBE2D4-205ENST00000443780 MIER1Q8N108 512 aa25.83■■□□□ 1.73
UBE2D4-205ENST00000443780 JMYQ8N9B5 988 aa25.83■■□□□ 1.73
UBE2D4-205ENST00000443780 SHTN1A0MZ66 631 aa25.82■■□□□ 1.72
UBE2D4-205ENST00000443780 LMBR1LQ6UX01 489 aa25.82■■□□□ 1.72
UBE2D4-205ENST00000443780 H7C1D1 291 aa25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 RPS12P25398 132 aaKnown RBP25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 IFIT5Q13325 482 aaKnown RBP25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 MICALL2Q8IY33 904 aa25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 ANKRD2Q9GZV1 360 aa25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 CHMP3Q9Y3E7 222 aa25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 MED23Q9ULK4 1368 aa25.81■■□□□ 1.72
UBE2D4-205ENST00000443780 TMEM88BA6NKF7 163 aa25.8■■□□□ 1.72
UBE2D4-205ENST00000443780 VIL1P09327 827 aaKnown RBP25.8■■□□□ 1.72
UBE2D4-205ENST00000443780 CT47B1P0C2W7 299 aaPredicted RBP25.8■■□□□ 1.72
UBE2D4-205ENST00000443780 HIRAP54198 1017 aaPredicted RBP25.8■■□□□ 1.72
UBE2D4-205ENST00000443780 LEMD3Q9Y2U8 911 aa25.8■■□□□ 1.72
UBE2D4-205ENST00000443780 TRPM4Q8TD43 1214 aa25.79■■□□□ 1.72
UBE2D4-205ENST00000443780 SMC4Q9NTJ3 1288 aa25.79■■□□□ 1.72
UBE2D4-205ENST00000443780 PGAP2Q9UHJ9 254 aa25.79■■□□□ 1.72
UBE2D4-205ENST00000443780 NBPF7P0C2Y1 421 aaPredicted RBP25.78■■□□□ 1.72
UBE2D4-205ENST00000443780 PODNQ7Z5L7 613 aa25.78■■□□□ 1.72
UBE2D4-205ENST00000443780 ZNF646O15015 1829 aaPredicted RBP25.78■■□□□ 1.72
UBE2D4-205ENST00000443780 UTYO14607 1347 aa25.78■■□□□ 1.72
UBE2D4-205ENST00000443780 CHRNDQ07001 517 aa25.77■■□□□ 1.72
UBE2D4-205ENST00000443780 ZC3H15Q8WU90 426 aaKnown RBP25.77■■□□□ 1.72
UBE2D4-205ENST00000443780 SUCLG2Q96I99 432 aa25.77■■□□□ 1.72
UBE2D4-205ENST00000443780 ZNF804BA4D1E1 1349 aa25.77■■□□□ 1.72
UBE2D4-205ENST00000443780 CCDC57Q2TAC2 916 aa25.76■■□□□ 1.71
UBE2D4-205ENST00000443780 SAMD7Q7Z3H4 446 aa25.76■■□□□ 1.71
UBE2D4-205ENST00000443780 KAZALD1Q96I82 304 aa25.76■■□□□ 1.71
UBE2D4-205ENST00000443780 MKRN1Q9UHC7 482 aaKnown RBP25.76■■□□□ 1.71
UBE2D4-205ENST00000443780 ZNF609O15014 1411 aa25.75■■□□□ 1.71
UBE2D4-205ENST00000443780 FMR1Q06787 632 aaKnown RBP eCLIP25.75■■□□□ 1.71
UBE2D4-205ENST00000443780 TXNRD3Q86VQ6 643 aa25.75■■□□□ 1.71
UBE2D4-205ENST00000443780 TRAF5O00463 557 aa25.74■■□□□ 1.71
UBE2D4-205ENST00000443780 RSBN1LQ6PCB5 846 aaPredicted RBP25.74■■□□□ 1.71
UBE2D4-205ENST00000443780 AGBL3Q8NEM8 1001 aa25.74■■□□□ 1.71
UBE2D4-205ENST00000443780 ZNF594Q96JF6 807 aaPredicted RBP25.74■■□□□ 1.71
UBE2D4-205ENST00000443780 CNTNAP1P78357 1384 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 USP17L3A6NCW0 530 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 USP17L4A6NCW7 530 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 KCNJ4P48050 445 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 TBC1D10BQ4KMP7 808 aaPredicted RBP25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 TAF7LQ5H9L4 462 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 USP17L1Q7RTZ2 530 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 COA1Q9GZY4 146 aa25.73■■□□□ 1.71
UBE2D4-205ENST00000443780 TAF5LO75529 589 aa25.72■■□□□ 1.71
UBE2D4-205ENST00000443780 EGFRP00533 1210 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms