RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 RTFDC1Q9BY42 306 aaPredicted RBP13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ANKIB1Q9P2G1 1089 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 XDHP47989 1333 aa13.02□□□□□ -0.33
HLA-DQB1-206ENST00000443574 EIF6P56537 245 aaKnown RBP13.01□□□□□ -0.33
HLA-DQB1-206ENST00000443574 CCDC57Q2TAC2 916 aa13.01□□□□□ -0.33
HLA-DQB1-206ENST00000443574 FRAT1Q92837 279 aaPredicted RBP13.01□□□□□ -0.33
HLA-DQB1-206ENST00000443574 UTYO14607 1347 aa13.01□□□□□ -0.33
HLA-DQB1-206ENST00000443574 C6orf229H3BNL8 230 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 CSF1RP07333 972 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 KIAA2012Q0VF49 1180 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 AOC3Q16853 763 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 BSDC1Q9NW68 430 aaPredicted RBP13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 PODXL2Q9NZ53 605 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 GGA1Q9UJY5 639 aa13□□□□□ -0.33
HLA-DQB1-206ENST00000443574 COL4A5P29400 1685 aa12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 IQCA1LA6NCM1 817 aa12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 UFL1O94874 794 aa12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 NBPF7P0C2Y1 421 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 UBTFL1P0CB47 393 aaPredicted RBP12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 FOXO4P98177 505 aa12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 FTSJ3Q8IY81 847 aaKnown RBP12.99□□□□□ -0.33
HLA-DQB1-206ENST00000443574 MYH13Q9UKX3 1938 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 G3V3G9 751 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 FZD9O00144 591 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 TRIM27P14373 513 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ATP2B4P23634 1241 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 GPSM2P81274 684 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 WASHC4Q2M389 1173 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 DCAF8Q5TAQ9 597 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 GPC2Q8N158 579 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 SUCLG2Q96I99 432 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ANKRD2Q9GZV1 360 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 NMRK2Q9NPI5 230 aa12.98□□□□□ -0.33
HLA-DQB1-206ENST00000443574 MED23Q9ULK4 1368 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ZNF541Q9H0D2 1346 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 BCAR3O75815 825 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 KCNJ4P48050 445 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 SLC51AQ86UW1 340 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 TBC1D16Q8TBP0 767 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ZC3H12CQ9C0D7 883 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 BICC1Q9H694 974 aaKnown RBP12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 ZNRF3Q9ULT6 936 aa12.97□□□□□ -0.33
HLA-DQB1-206ENST00000443574 SCN9AQ15858 1988 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 KIF3CO14782 793 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 TOMM70O94826 608 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 GNAI3P08754 354 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 MS4A1P11836 297 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 LMOD1P29536 600 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 MKRN4PQ13434 485 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 RABL6Q3YEC7 729 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 INTS3Q68E01 1043 aaKnown RBP12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 L3MBTL3Q96JM7 780 aaPredicted RBP12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 USP44Q9H0E7 712 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 RRAGCQ9HB90 399 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 CNNM1Q9NRU3 951 aa12.96□□□□□ -0.33
HLA-DQB1-206ENST00000443574 DDNO94850 711 aaPredicted RBP12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 TNIP1Q15025 636 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 EPHA10Q5JZY3 1008 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 LDHAL6AQ6ZMR3 332 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 POLLQ9UGP5 575 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 MINPP1Q9UNW1 487 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 LEMD3Q9Y2U8 911 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 GJA3Q9Y6H8 435 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ARAP2Q8WZ64 1704 aa12.95□□□□□ -0.34
HLA-DQB1-206ENST00000443574 RIMBP2O15034 1052 aa12.94□□□□□ -0.34
HLA-DQB1-206ENST00000443574 C1QTNF8P60827 252 aa12.94□□□□□ -0.34
HLA-DQB1-206ENST00000443574 CHRNDQ07001 517 aa12.94□□□□□ -0.34
HLA-DQB1-206ENST00000443574 CIAPIN1Q6FI81 312 aa12.94□□□□□ -0.34
HLA-DQB1-206ENST00000443574 CLUAP1Q96AJ1 413 aa12.94□□□□□ -0.34
HLA-DQB1-206ENST00000443574 HACL1Q9UJ83 578 aa12.94□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ZNF804BA4D1E1 1349 aa12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ZNF646O15015 1829 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ECE2O60344 883 aa12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 DZIP1LQ8IYY4 767 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 RBM46Q8TBY0 533 aaKnown RBP12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 KAZALD1Q96I82 304 aa12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 RCAN3Q9UKA8 241 aa12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ADAMTSL1Q8N6G6 1762 aa12.93□□□□□ -0.34
HLA-DQB1-206ENST00000443574 MROH5Q6ZUA9 1318 aa12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 PNMA8AQ86V59 439 aaPredicted RBP12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ANKRD44Q8N8A2 993 aa12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 SMC1BQ8NDV3 1235 aa12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 YTHDC1Q96MU7 727 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 MEIS3Q99687 375 aa12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 LRRFIP2Q9Y608 721 aaKnown RBP12.92□□□□□ -0.34
HLA-DQB1-206ENST00000443574 RAD17O75943 681 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 GNAI2P04899 355 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 CXCL9Q07325 125 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 FSTL1Q12841 308 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 PODNQ7Z5L7 613 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ITPRIPQ8IWB1 547 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 TMEM57Q8N5G2 664 aa12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 ZNF594Q96JF6 807 aaPredicted RBP12.91□□□□□ -0.34
HLA-DQB1-206ENST00000443574 GPR101Q96P66 508 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms