RNA–Protein interactions for RNA: ENST00000443003.2

RPSA-202, Transcript of ribosomal protein SA, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RPSA, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-202ENST00000443003 SAGE1Q9NXZ1 904 aa9.78□□□□□ -0.84
RPSA-202ENST00000443003 GGA3Q9NZ52 723 aa9.78□□□□□ -0.84
RPSA-202ENST00000443003 TNRC18O15417 2968 aaPredicted RBP9.78□□□□□ -0.84
RPSA-202ENST00000443003 RTL5Q5HYW3 569 aaPredicted RBP9.77□□□□□ -0.85
RPSA-202ENST00000443003 SULF1Q8IWU6 871 aa9.77□□□□□ -0.85
RPSA-202ENST00000443003 CELF1Q92879 486 aaKnown RBP9.77□□□□□ -0.85
RPSA-202ENST00000443003 CCDC102AQ96A19 550 aa9.77□□□□□ -0.85
RPSA-202ENST00000443003 PLEKHF1Q96S99 279 aa9.77□□□□□ -0.85
RPSA-202ENST00000443003 KCNQ5Q9NR82 932 aa9.77□□□□□ -0.85
RPSA-202ENST00000443003 PAPPA2Q9BXP8 1791 aa9.77□□□□□ -0.85
RPSA-202ENST00000443003 ASTN2O75129 1339 aaPredicted RBP9.77□□□□□ -0.85
RPSA-202ENST00000443003 RTL9Q8NET4 1388 aa9.76□□□□□ -0.85
RPSA-202ENST00000443003 SLC10A3P09131 477 aa9.76□□□□□ -0.85
RPSA-202ENST00000443003 GPSM2P81274 684 aa9.76□□□□□ -0.85
RPSA-202ENST00000443003 WDR43Q15061 677 aaKnown RBP eCLIP9.76□□□□□ -0.85not detected■□□□□ 11.1
RPSA-202ENST00000443003 TMC4Q7Z404 712 aa9.76□□□□□ -0.85
RPSA-202ENST00000443003 CTU1Q7Z7A3 348 aaKnown RBP9.76□□□□□ -0.85
RPSA-202ENST00000443003 DPF2Q92785 391 aa9.76□□□□□ -0.85
RPSA-202ENST00000443003 CDCA5Q96FF9 252 aa9.76□□□□□ -0.85
RPSA-202ENST00000443003 G3V3G9 751 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 RPS12P25398 132 aaKnown RBP9.75□□□□□ -0.85
RPSA-202ENST00000443003 TCIRG1Q13488 830 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 DCAF8Q5TAQ9 597 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
RPSA-202ENST00000443003 RASAL3Q86YV0 1011 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 FAM89AQ96GI7 184 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 EYA3Q99504 573 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 POLLQ9UGP5 575 aa9.75□□□□□ -0.85
RPSA-202ENST00000443003 SCAF8Q9UPN6 1271 aaKnown RBP9.75□□□□□ -0.85
RPSA-202ENST00000443003 ATP5J2-PTCD1G3V325 749 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 RIPK4P57078 832 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 KRT24Q2M2I5 525 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 ANGEL2Q5VTE6 544 aaKnown RBP9.74□□□□□ -0.85
RPSA-202ENST00000443003 CSRNP1Q96S65 589 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 CHPF2Q9P2E5 772 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 HDAC9Q9UKV0 1011 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 HPS5Q9UPZ3 1129 aa9.74□□□□□ -0.85
RPSA-202ENST00000443003 LAS1LQ9Y4W2 734 aaKnown RBP9.74□□□□□ -0.85
RPSA-202ENST00000443003 UFL1O94874 794 aa9.73□□□□□ -0.85
RPSA-202ENST00000443003 TBC1D16Q8TBP0 767 aa9.73□□□□□ -0.85
RPSA-202ENST00000443003 MRS2Q9HD23 443 aa9.73□□□□□ -0.85
RPSA-202ENST00000443003 TBC1D8O95759 1140 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 MKRN3Q13064 507 aaKnown RBP9.72□□□□□ -0.85
RPSA-202ENST00000443003 SCARF1Q14162 830 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 TTLL12Q14166 644 aaPredicted RBP9.72□□□□□ -0.85
RPSA-202ENST00000443003 NEUROD2Q15784 382 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 HDGFL1Q5TGJ6 251 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 MOB2Q70IA6 237 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 ZC3H12CQ9C0D7 883 aaKnown RBP9.72□□□□□ -0.85
RPSA-202ENST00000443003 ANKIB1Q9P2G1 1089 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 MYH3P11055 1940 aa9.72□□□□□ -0.85
RPSA-202ENST00000443003 ZNF646O15015 1829 aaPredicted RBP9.71□□□□□ -0.85
RPSA-202ENST00000443003 CCER2I3L3R5 266 aa9.71□□□□□ -0.86
RPSA-202ENST00000443003 IRS4O14654 1257 aaPredicted RBP9.71□□□□□ -0.86
RPSA-202ENST00000443003 LMOD3Q0VAK6 560 aa9.71□□□□□ -0.86
RPSA-202ENST00000443003 SF3B3Q15393 1217 aaKnown RBP9.71□□□□□ -0.86
RPSA-202ENST00000443003 ZNF296Q8WUU4 475 aaPredicted RBP9.71□□□□□ -0.86
RPSA-202ENST00000443003 FBXW7Q969H0 707 aa9.71□□□□□ -0.86
RPSA-202ENST00000443003 CCDC85AQ96PX6 553 aaPredicted RBP9.71□□□□□ -0.86
RPSA-202ENST00000443003 VIL1P09327 827 aaKnown RBP9.7□□□□□ -0.86
RPSA-202ENST00000443003 RPS8P62241 208 aaKnown RBP9.7□□□□□ -0.86
RPSA-202ENST00000443003 PRAMEF18Q5VWM3 479 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
RPSA-202ENST00000443003 ANKRD13DQ6ZTN6 518 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 CCDC146Q8IYE0 955 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 PLBD2Q8NHP8 589 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 ISCA1Q9BUE6 129 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 MYOZ2Q9NPC6 264 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 SEC31BQ9NQW1 1179 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.7□□□□□ -0.86
RPSA-202ENST00000443003 GGA1Q9UJY5 639 aa9.7□□□□□ -0.86
RPSA-202ENST00000443003 UBE2Q2LH0YL09 131 aa9.69□□□□□ -0.86
RPSA-202ENST00000443003 USP17L8P0C7I0 530 aa9.69□□□□□ -0.86
RPSA-202ENST00000443003 TMPOP42166 694 aaKnown RBP9.69□□□□□ -0.86
RPSA-202ENST00000443003 REM2Q8IYK8 340 aaPredicted RBP9.69□□□□□ -0.86
RPSA-202ENST00000443003 BABAM1Q9NWV8 329 aa9.69□□□□□ -0.86
RPSA-202ENST00000443003 ZNF280AP59817 542 aaPredicted RBP9.68□□□□□ -0.86
RPSA-202ENST00000443003 FKBP1BP68106 108 aa9.68□□□□□ -0.86
RPSA-202ENST00000443003 PRKG1Q13976 671 aa9.68□□□□□ -0.86
RPSA-202ENST00000443003 PKN2Q16513 984 aaKnown RBP9.68□□□□□ -0.86
RPSA-202ENST00000443003 AGBL3Q8NEM8 1001 aa9.68□□□□□ -0.86
RPSA-202ENST00000443003 JARID2Q92833 1246 aaPredicted RBP9.68□□□□□ -0.86
RPSA-202ENST00000443003 DBF4Q9UBU7 674 aaPredicted RBP9.68□□□□□ -0.86
RPSA-202ENST00000443003 ZNF609O15014 1411 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 PITPNM2Q9BZ72 1349 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 GPR25O00155 361 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 SASH1O94885 1247 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 GOLGA2Q08379 1002 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 NBPF9Q3BBW0 867 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 CCDC152Q4G0S7 254 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 RIC3Q7Z5B4 369 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 RUNDC1Q96C34 613 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 MYD88Q99836 296 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 MXD3Q9BW11 206 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 ADAMTS8Q9UP79 889 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 ECM29Q5VYK3 1845 aa9.67□□□□□ -0.86
RPSA-202ENST00000443003 RBBP6Q7Z6E9 1792 aaKnown RBP9.67□□□□□ -0.86
RPSA-202ENST00000443003 XDHP47989 1333 aa9.66□□□□□ -0.86
RPSA-202ENST00000443003 USP17L3A6NCW0 530 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms