RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 LDHAL6AQ6ZMR3 332 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 TBC1D16Q8TBP0 767 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 VPS33BQ9H267 617 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 CNNM1Q9NRU3 951 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 PODXL2Q9NZ53 605 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 POLLQ9UGP5 575 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 COG6Q9Y2V7 657 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 MYH3P11055 1940 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 XDHP47989 1333 aa15.42■□□□□ 0.06
USP1-203ENST00000442679 PPIP5K2O43314 1243 aa15.41■□□□□ 0.06
USP1-203ENST00000442679 MVPQ14764 893 aaKnown RBP15.41■□□□□ 0.06
USP1-203ENST00000442679 LARGE2Q8N3Y3 721 aa15.41■□□□□ 0.06
USP1-203ENST00000442679 ANKRD2Q9GZV1 360 aa15.41■□□□□ 0.06
USP1-203ENST00000442679 GGA1Q9UJY5 639 aa15.41■□□□□ 0.06
USP1-203ENST00000442679 UFL1O94874 794 aa15.4■□□□□ 0.06
USP1-203ENST00000442679 AOC3Q16853 763 aa15.4■□□□□ 0.06
USP1-203ENST00000442679 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
USP1-203ENST00000442679 KLHDC4Q8TBB5 520 aa15.4■□□□□ 0.06
USP1-203ENST00000442679 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
USP1-203ENST00000442679 EYA3Q99504 573 aa15.4■□□□□ 0.06
USP1-203ENST00000442679 CHD4Q14839 1912 aa15.39■□□□□ 0.05
USP1-203ENST00000442679 RIMBP2O15034 1052 aa15.39■□□□□ 0.05
USP1-203ENST00000442679 ATP2B4P23634 1241 aa15.39■□□□□ 0.05
USP1-203ENST00000442679 RFX5P48382 616 aaPredicted RBP15.39■□□□□ 0.05
USP1-203ENST00000442679 RRP1P56182 461 aaKnown RBP15.39■□□□□ 0.05
USP1-203ENST00000442679 CHRNDQ07001 517 aa15.39■□□□□ 0.05
USP1-203ENST00000442679 KIAA2012Q0VF49 1180 aa15.39■□□□□ 0.05
USP1-203ENST00000442679 HELBQ8NG08 1087 aaPredicted RBP15.39■□□□□ 0.05
USP1-203ENST00000442679 GPR101Q96P66 508 aaPredicted RBP15.39■□□□□ 0.05
USP1-203ENST00000442679 PUS3Q9BZE2 481 aaKnown RBP15.39■□□□□ 0.05
USP1-203ENST00000442679 DDX19BQ9UMR2 479 aa15.39■□□□□ 0.05
USP1-203ENST00000442679 ZC3H4Q9UPT8 1303 aaKnown RBP15.39■□□□□ 0.05
USP1-203ENST00000442679 LRRC37AA6NMS7 1700 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 WTIPA6NIX2 430 aaPredicted RBP15.38■□□□□ 0.05
USP1-203ENST00000442679 SRGAP3O43295 1099 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 PTPN12Q05209 780 aaKnown RBP15.38■□□□□ 0.05
USP1-203ENST00000442679 MTX1Q13505 466 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 ZC3H12CQ9C0D7 883 aaKnown RBP15.38■□□□□ 0.05
USP1-203ENST00000442679 C1orf115Q9H7X2 142 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 LEMD3Q9Y2U8 911 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 RIPOR2Q9Y4F9 1068 aa15.38■□□□□ 0.05
USP1-203ENST00000442679 TAF5LO75529 589 aa15.37■□□□□ 0.05
USP1-203ENST00000442679 LRRC24Q50LG9 513 aa15.37■□□□□ 0.05
USP1-203ENST00000442679 ZNF526Q8TF50 670 aaPredicted RBP15.37■□□□□ 0.05
USP1-203ENST00000442679 CHMP4BQ9H444 224 aaKnown RBP15.37■□□□□ 0.05
USP1-203ENST00000442679 SBF1O95248 1867 aa15.37■□□□□ 0.05
USP1-203ENST00000442679 DUOX1Q9NRD9 1551 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 FZD9O00144 591 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 EYA2O00167 538 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 KCNJ4P48050 445 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 ATP8B2P98198 1209 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 DPY19L2Q6NUT2 758 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 ZNF784Q8NCA9 323 aaPredicted RBP15.36■□□□□ 0.05
USP1-203ENST00000442679 ZNRF3Q9ULT6 936 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 ZNF804BA4D1E1 1349 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 MROH5Q6ZUA9 1318 aa15.36■□□□□ 0.05
USP1-203ENST00000442679 PNMA6EA0A0J9YXQ4 647 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 GLTPD2A6NH11 291 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 G3V3G9 751 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 EIF6P56537 245 aaKnown RBP15.35■□□□□ 0.05
USP1-203ENST00000442679 DOK7Q18PE1 504 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 METTL24Q5JXM2 366 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 DCAF8Q5TAQ9 597 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 SIL1Q9H173 461 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 COPRSQ9NQ92 184 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 ZBTB40Q9NUA8 1239 aa15.35■□□□□ 0.05
USP1-203ENST00000442679 PA2G4Q9UQ80 394 aaKnown RBP15.35■□□□□ 0.05
USP1-203ENST00000442679 SNAP23O00161 211 aa15.34■□□□□ 0.05
USP1-203ENST00000442679 ATG9AQ7Z3C6 839 aa15.34■□□□□ 0.05
USP1-203ENST00000442679 FBXO3Q9UK99 471 aa15.34■□□□□ 0.05
USP1-203ENST00000442679 KDM2BQ8NHM5 1336 aa15.34■□□□□ 0.05
USP1-203ENST00000442679 COL4A5P29400 1685 aa15.34■□□□□ 0.05
USP1-203ENST00000442679 SPEF2Q9C093 1822 aa15.33■□□□□ 0.05
USP1-203ENST00000442679 CIAO1O76071 339 aa15.33■□□□□ 0.04
USP1-203ENST00000442679 DBNDD1Q9H9R9 158 aa15.33■□□□□ 0.04
USP1-203ENST00000442679 GPBP1L1Q9HC44 474 aaPredicted RBP15.33■□□□□ 0.04
USP1-203ENST00000442679 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
USP1-203ENST00000442679 ZNF541Q9H0D2 1346 aa15.33■□□□□ 0.04
USP1-203ENST00000442679 CCDC88AQ3V6T2 1871 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 ECE2O60344 883 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 DDNO94850 711 aaPredicted RBP15.32■□□□□ 0.04
USP1-203ENST00000442679 PDE8BO95263 885 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 KLRK1P26718 216 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 IL15P40933 162 aaPredicted RBP15.32■□□□□ 0.04
USP1-203ENST00000442679 UBE4AQ14139 1066 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 POLA2Q14181 598 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 TXNRD3Q86VQ6 643 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 SSH3Q8TE77 659 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 SUPT16HQ9Y5B9 1047 aaKnown RBP15.32■□□□□ 0.04
USP1-203ENST00000442679 GJA3Q9Y6H8 435 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 MED23Q9ULK4 1368 aa15.32■□□□□ 0.04
USP1-203ENST00000442679 YDJCA8MPS7 323 aa15.31■□□□□ 0.04
USP1-203ENST00000442679 RAD17O75943 681 aa15.31■□□□□ 0.04
USP1-203ENST00000442679 CXCL9Q07325 125 aa15.31■□□□□ 0.04
USP1-203ENST00000442679 G3BP1Q13283 466 aaKnown RBP eCLIP15.31■□□□□ 0.04
USP1-203ENST00000442679 VGLL2Q8N8G2 317 aa15.31■□□□□ 0.04
USP1-203ENST00000442679 RRAGCQ9HB90 399 aa15.31■□□□□ 0.04
USP1-203ENST00000442679 CEP126Q9P2H0 1117 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms