RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 CELF1Q92879 486 aaKnown RBP13.14□□□□□ -0.31
SYN3-204ENST00000441821 BABAM1Q9NWV8 329 aa13.14□□□□□ -0.31
SYN3-204ENST00000441821 DDX60Q8IY21 1712 aaKnown RBP13.13□□□□□ -0.31
SYN3-204ENST00000441821 ZNF280AP59817 542 aaPredicted RBP13.13□□□□□ -0.31
SYN3-204ENST00000441821 GPSM2P81274 684 aa13.13□□□□□ -0.31
SYN3-204ENST00000441821 TBC1D16Q8TBP0 767 aa13.13□□□□□ -0.31
SYN3-204ENST00000441821 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
SYN3-204ENST00000441821 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
SYN3-204ENST00000441821 HTTP42858 3142 aa13.13□□□□□ -0.31
SYN3-204ENST00000441821 CENPFP49454 3210 aa13.13□□□□□ -0.31
SYN3-204ENST00000441821 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
SYN3-204ENST00000441821 NOM1Q5C9Z4 860 aaKnown RBP13.12□□□□□ -0.31
SYN3-204ENST00000441821 ZNF296Q8WUU4 475 aaPredicted RBP13.12□□□□□ -0.31
SYN3-204ENST00000441821 GCC1Q96CN9 775 aa13.12□□□□□ -0.31
SYN3-204ENST00000441821 ZC3H12CQ9C0D7 883 aaKnown RBP13.12□□□□□ -0.31
SYN3-204ENST00000441821 ZNF609O15014 1411 aa13.12□□□□□ -0.31
SYN3-204ENST00000441821 MAPK8IP3Q9UPT6 1336 aa13.12□□□□□ -0.31
SYN3-204ENST00000441821 SCARF1Q14162 830 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 ANGEL2Q5VTE6 544 aaKnown RBP13.11□□□□□ -0.31
SYN3-204ENST00000441821 AGBL3Q8NEM8 1001 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 NECTIN2Q92692 538 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 FAM89AQ96GI7 184 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 PODXL2Q9NZ53 605 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 PAPPA2Q9BXP8 1791 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
SYN3-204ENST00000441821 TBC1D8O95759 1140 aa13.1□□□□□ -0.31
SYN3-204ENST00000441821 TM4SF4P48230 202 aa13.1□□□□□ -0.31
SYN3-204ENST00000441821 RPS8P62241 208 aaKnown RBP13.1□□□□□ -0.31
SYN3-204ENST00000441821 FBXO46Q6PJ61 603 aaPredicted RBP13.1□□□□□ -0.31
SYN3-204ENST00000441821 ISCA1Q9BUE6 129 aa13.1□□□□□ -0.31
SYN3-204ENST00000441821 SCN9AQ15858 1988 aa13.09□□□□□ -0.31
SYN3-204ENST00000441821 G3V3G9 751 aa13.09□□□□□ -0.31
SYN3-204ENST00000441821 GPR25O00155 361 aa13.09□□□□□ -0.31
SYN3-204ENST00000441821 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
SYN3-204ENST00000441821 RSBN1LQ6PCB5 846 aaPredicted RBP13.09□□□□□ -0.31
SYN3-204ENST00000441821 PLBD2Q8NHP8 589 aa13.09□□□□□ -0.31
SYN3-204ENST00000441821 ZNF428Q96B54 188 aa13.09□□□□□ -0.31
SYN3-204ENST00000441821 COL4A1P02462 1669 aa13.08□□□□□ -0.31
SYN3-204ENST00000441821 BRCA2P51587 3418 aa13.08□□□□□ -0.32
SYN3-204ENST00000441821 RIPK4P57078 832 aa13.08□□□□□ -0.32
SYN3-204ENST00000441821 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
SYN3-204ENST00000441821 MOB2Q70IA6 237 aa13.08□□□□□ -0.32
SYN3-204ENST00000441821 GMLQ99445 158 aa13.08□□□□□ -0.32
SYN3-204ENST00000441821 MYOZ2Q9NPC6 264 aa13.08□□□□□ -0.32
SYN3-204ENST00000441821 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
SYN3-204ENST00000441821 UFL1O94874 794 aa13.07□□□□□ -0.32
SYN3-204ENST00000441821 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
SYN3-204ENST00000441821 TRIM28Q13263 835 aaKnown RBP13.07□□□□□ -0.32
SYN3-204ENST00000441821 CFHR5Q9BXR6 569 aa13.07□□□□□ -0.32
SYN3-204ENST00000441821 ANKIB1Q9P2G1 1089 aa13.07□□□□□ -0.32
SYN3-204ENST00000441821 GGA1Q9UJY5 639 aa13.07□□□□□ -0.32
SYN3-204ENST00000441821 ATP5J2-PTCD1G3V325 749 aa13.06□□□□□ -0.32
SYN3-204ENST00000441821 IRS4O14654 1257 aaPredicted RBP13.06□□□□□ -0.32
SYN3-204ENST00000441821 ZEB1P37275 1124 aaPredicted RBP13.06□□□□□ -0.32
SYN3-204ENST00000441821 CHPF2Q9P2E5 772 aa13.06□□□□□ -0.32
SYN3-204ENST00000441821 PSME4Q14997 1843 aa13.05□□□□□ -0.32
SYN3-204ENST00000441821 FKTNO75072 461 aa13.05□□□□□ -0.32
SYN3-204ENST00000441821 LMOD3Q0VAK6 560 aa13.05□□□□□ -0.32
SYN3-204ENST00000441821 SREBF2Q12772 1141 aa13.05□□□□□ -0.32
SYN3-204ENST00000441821 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
SYN3-204ENST00000441821 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
SYN3-204ENST00000441821 USP17L3A6NCW0 530 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 USP17L4A6NCW7 530 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 CHL1O00533 1208 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 HSP90B1P14625 803 aaKnown RBP13.04□□□□□ -0.32
SYN3-204ENST00000441821 KRT24Q2M2I5 525 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 PRAMEF18Q5VWM3 479 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 USP17L1Q7RTZ2 530 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 PODNQ7Z5L7 613 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 SEC31BQ9NQW1 1179 aa13.04□□□□□ -0.32
SYN3-204ENST00000441821 DBF4Q9UBU7 674 aaPredicted RBP13.04□□□□□ -0.32
SYN3-204ENST00000441821 SCAF8Q9UPN6 1271 aaKnown RBP13.04□□□□□ -0.32
SYN3-204ENST00000441821 HOXB7P09629 217 aa13.03□□□□□ -0.32
SYN3-204ENST00000441821 NF2P35240 595 aa13.03□□□□□ -0.32
SYN3-204ENST00000441821 TMPOP42166 694 aaKnown RBP13.03□□□□□ -0.32
SYN3-204ENST00000441821 TTLL12Q14166 644 aaPredicted RBP13.03□□□□□ -0.32
SYN3-204ENST00000441821 NBPF9Q3BBW0 867 aa13.03□□□□□ -0.32
SYN3-204ENST00000441821 HDGFL1Q5TGJ6 251 aa13.03□□□□□ -0.32
SYN3-204ENST00000441821 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
SYN3-204ENST00000441821 ZBTB38Q8NAP3 1195 aaPredicted RBP13.03□□□□□ -0.32
SYN3-204ENST00000441821 ALDH1A1P00352 501 aa13.02□□□□□ -0.33
SYN3-204ENST00000441821 MKRN3Q13064 507 aaKnown RBP13.02□□□□□ -0.33
SYN3-204ENST00000441821 CCDC152Q4G0S7 254 aa13.02□□□□□ -0.33
SYN3-204ENST00000441821 R3HDMLQ9H3Y0 253 aa13.02□□□□□ -0.33
SYN3-204ENST00000441821 HYPKQ9NX55 129 aa13.02□□□□□ -0.33
SYN3-204ENST00000441821 XDHP47989 1333 aa13.02□□□□□ -0.33
SYN3-204ENST00000441821 ATP2B4P23634 1241 aa13.01□□□□□ -0.33
SYN3-204ENST00000441821 MMP14P50281 582 aa13.01□□□□□ -0.33
SYN3-204ENST00000441821 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
SYN3-204ENST00000441821 ARMC9Q7Z3E5 817 aa13.01□□□□□ -0.33
SYN3-204ENST00000441821 OGFOD1Q8N543 542 aa13.01□□□□□ -0.33
SYN3-204ENST00000441821 WNT10BO00744 389 aa13□□□□□ -0.33
SYN3-204ENST00000441821 INHBEP58166 350 aa13□□□□□ -0.33
SYN3-204ENST00000441821 DACT2Q5SW24 774 aa13□□□□□ -0.33
SYN3-204ENST00000441821 LDLRAD1Q5T700 205 aa13□□□□□ -0.33
SYN3-204ENST00000441821 SPRYD7Q5W111 196 aa13□□□□□ -0.33
SYN3-204ENST00000441821 MYO3BQ8WXR4 1341 aa12.99□□□□□ -0.33
SYN3-204ENST00000441821 POTEFA5A3E0 1075 aa12.99□□□□□ -0.33
SYN3-204ENST00000441821 PDE8AO60658 829 aa12.99□□□□□ -0.33
SYN3-204ENST00000441821 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms