RNA–Protein interactions for RNA: ENST00000441135.1

SMPD4-210, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 699 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-210ENST00000441135 GPRC5DQ9NZD1 345 aa23.12■■□□□ 1.29
SMPD4-210ENST00000441135 POLLQ9UGP5 575 aa23.12■■□□□ 1.29
SMPD4-210ENST00000441135 RAD17O75943 681 aa23.11■■□□□ 1.29
SMPD4-210ENST00000441135 ITGBL1O95965 494 aaPredicted RBP23.11■■□□□ 1.29
SMPD4-210ENST00000441135 TTLL11Q8NHH1 800 aa23.11■■□□□ 1.29
SMPD4-210ENST00000441135 GMPSP49915 693 aaPredicted RBP23.1■■□□□ 1.29
SMPD4-210ENST00000441135 BEND3Q5T5X7 828 aa23.1■■□□□ 1.29
SMPD4-210ENST00000441135 ADARB2Q9NS39 739 aaKnown RBP23.1■■□□□ 1.29
SMPD4-210ENST00000441135 ANKIB1Q9P2G1 1089 aa23.1■■□□□ 1.29
SMPD4-210ENST00000441135 YDJCA8MPS7 323 aa23.09■■□□□ 1.29
SMPD4-210ENST00000441135 UFL1O94874 794 aa23.09■■□□□ 1.29
SMPD4-210ENST00000441135 MAP1SQ66K74 1059 aaPredicted RBP23.09■■□□□ 1.29
SMPD4-210ENST00000441135 CNTROBQ8N137 903 aa23.09■■□□□ 1.29
SMPD4-210ENST00000441135 PLA2G12BQ9BX93 195 aa23.09■■□□□ 1.29
SMPD4-210ENST00000441135 SMC4Q9NTJ3 1288 aa23.09■■□□□ 1.29
SMPD4-210ENST00000441135 GGA1Q9UJY5 639 aa23.09■■□□□ 1.29
SMPD4-210ENST00000441135 F6X3S4 739 aa23.08■■□□□ 1.29
SMPD4-210ENST00000441135 RIMBP2O15034 1052 aa23.08■■□□□ 1.29
SMPD4-210ENST00000441135 ALDH1L1O75891 902 aa23.08■■□□□ 1.29
SMPD4-210ENST00000441135 BCL2L13Q9BXK5 485 aa23.08■■□□□ 1.29
SMPD4-210ENST00000441135 ZC3H12CQ9C0D7 883 aaKnown RBP23.08■■□□□ 1.29
SMPD4-210ENST00000441135 GREM2Q9H772 168 aa23.08■■□□□ 1.29
SMPD4-210ENST00000441135 XDHP47989 1333 aa23.08■■□□□ 1.28
SMPD4-210ENST00000441135 DBNDD1Q9H9R9 158 aa23.07■■□□□ 1.28
SMPD4-210ENST00000441135 MYH3P11055 1940 aa23.06■■□□□ 1.28
SMPD4-210ENST00000441135 TMEM88BA6NKF7 163 aa23.06■■□□□ 1.28
SMPD4-210ENST00000441135 ECE2O60344 883 aa23.06■■□□□ 1.28
SMPD4-210ENST00000441135 RARSP54136 660 aaKnown RBP23.06■■□□□ 1.28
SMPD4-210ENST00000441135 CASP7P55210 303 aa23.06■■□□□ 1.28
SMPD4-210ENST00000441135 BSDC1Q9NW68 430 aaPredicted RBP23.06■■□□□ 1.28
SMPD4-210ENST00000441135 KIF16BQ96L93 1317 aa23.05■■□□□ 1.28
SMPD4-210ENST00000441135 DPF2Q92785 391 aa23.04■■□□□ 1.28
SMPD4-210ENST00000441135 GPR101Q96P66 508 aaPredicted RBP23.04■■□□□ 1.28
SMPD4-210ENST00000441135 SRCIN1Q9C0H9 1055 aa23.04■■□□□ 1.28
SMPD4-210ENST00000441135 G3V3G9 751 aa23.03■■□□□ 1.28
SMPD4-210ENST00000441135 PSMD14O00487 310 aa23.03■■□□□ 1.28
SMPD4-210ENST00000441135 ATP2B4P23634 1241 aa23.03■■□□□ 1.28
SMPD4-210ENST00000441135 RPS12P25398 132 aaKnown RBP23.03■■□□□ 1.28
SMPD4-210ENST00000441135 DOK7Q18PE1 504 aa23.03■■□□□ 1.28
SMPD4-210ENST00000441135 DCAF8Q5TAQ9 597 aa23.03■■□□□ 1.28
SMPD4-210ENST00000441135 H7C1D1 291 aa23.02■■□□□ 1.28
SMPD4-210ENST00000441135 IGHMBP2P38935 993 aaKnown RBP23.02■■□□□ 1.28
SMPD4-210ENST00000441135 ARHGAP45Q92619 1136 aa23.02■■□□□ 1.28
SMPD4-210ENST00000441135 CNOT7Q9UIV1 285 aaKnown RBP23.02■■□□□ 1.28
SMPD4-210ENST00000441135 CNTNAP1P78357 1384 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 GRM8O00222 908 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 CSF1RP07333 972 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 ITGA6P23229 1130 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 FAM161AQ3B820 660 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 SLC4A10Q6U841 1118 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 MICALL2Q8IY33 904 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 ZC3H15Q8WU90 426 aaKnown RBP23.01■■□□□ 1.27
SMPD4-210ENST00000441135 MKRN1Q9UHC7 482 aaKnown RBP23.01■■□□□ 1.27
SMPD4-210ENST00000441135 MINPP1Q9UNW1 487 aa23.01■■□□□ 1.27
SMPD4-210ENST00000441135 API5Q9BZZ5 524 aaKnown RBP23■■□□□ 1.27
SMPD4-210ENST00000441135 ZBTB12Q9Y330 459 aaPredicted RBP23■■□□□ 1.27
SMPD4-210ENST00000441135 UTYO14607 1347 aa23■■□□□ 1.27
SMPD4-210ENST00000441135 PGAP2Q9UHJ9 254 aa22.99■■□□□ 1.27
SMPD4-210ENST00000441135 MED23Q9ULK4 1368 aa22.99■■□□□ 1.27
SMPD4-210ENST00000441135 ZNF609O15014 1411 aa22.99■■□□□ 1.27
SMPD4-210ENST00000441135 TRPM4Q8TD43 1214 aa22.98■■□□□ 1.27
SMPD4-210ENST00000441135 MPHOSPH8Q99549 860 aa22.98■■□□□ 1.27
SMPD4-210ENST00000441135 ANKRD2Q9GZV1 360 aa22.98■■□□□ 1.27
SMPD4-210ENST00000441135 ANKRD18BA2A2Z9 1011 aa22.97■■□□□ 1.27
SMPD4-210ENST00000441135 VIL1P09327 827 aaKnown RBP22.97■■□□□ 1.27
SMPD4-210ENST00000441135 CCT4P50991 539 aaKnown RBP22.97■■□□□ 1.27
SMPD4-210ENST00000441135 KCNQ5Q9NR82 932 aa22.97■■□□□ 1.27
SMPD4-210ENST00000441135 C9orf78Q9NZ63 289 aaPredicted RBP22.97■■□□□ 1.27
SMPD4-210ENST00000441135 NOB1Q9ULX3 412 aaKnown RBP22.97■■□□□ 1.27
SMPD4-210ENST00000441135 SHTN1A0MZ66 631 aa22.96■■□□□ 1.27
SMPD4-210ENST00000441135 HIRAP54198 1017 aaPredicted RBP22.96■■□□□ 1.27
SMPD4-210ENST00000441135 PODNQ7Z5L7 613 aa22.96■■□□□ 1.27
SMPD4-210ENST00000441135 LEMD3Q9Y2U8 911 aa22.96■■□□□ 1.27
SMPD4-210ENST00000441135 RASSF10A6NK89 507 aa22.95■■□□□ 1.26
SMPD4-210ENST00000441135 IPO8O15397 1037 aaKnown RBP22.95■■□□□ 1.26
SMPD4-210ENST00000441135 FOXO4P98177 505 aa22.95■■□□□ 1.26
SMPD4-210ENST00000441135 IFIT5Q13325 482 aaKnown RBP22.95■■□□□ 1.26
SMPD4-210ENST00000441135 ABT1Q9ULW3 272 aaKnown RBP22.95■■□□□ 1.26
SMPD4-210ENST00000441135 SPEF2Q9C093 1822 aa22.94■■□□□ 1.26
SMPD4-210ENST00000441135 TRAF5O00463 557 aa22.94■■□□□ 1.26
SMPD4-210ENST00000441135 AGBL3Q8NEM8 1001 aa22.94■■□□□ 1.26
SMPD4-210ENST00000441135 RSBN1LQ6PCB5 846 aaPredicted RBP22.93■■□□□ 1.26
SMPD4-210ENST00000441135 CDC37L1Q7L3B6 337 aa22.93■■□□□ 1.26
SMPD4-210ENST00000441135 SAMD7Q7Z3H4 446 aa22.93■■□□□ 1.26
SMPD4-210ENST00000441135 CHMP3Q9Y3E7 222 aa22.93■■□□□ 1.26
SMPD4-210ENST00000441135 SCN9AQ15858 1988 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 ZNF804BA4D1E1 1349 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 USP17L3A6NCW0 530 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 USP17L4A6NCW7 530 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 HSPA1AP0DMV8 641 aaKnown RBP22.92■■□□□ 1.26
SMPD4-210ENST00000441135 HSPA1BP0DMV9 641 aaKnown RBP22.92■■□□□ 1.26
SMPD4-210ENST00000441135 DEFB115Q30KQ5 88 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 TBC1D10BQ4KMP7 808 aaPredicted RBP22.92■■□□□ 1.26
SMPD4-210ENST00000441135 LMBR1LQ6UX01 489 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 USP17L1Q7RTZ2 530 aa22.92■■□□□ 1.26
SMPD4-210ENST00000441135 GLIS2Q9BZE0 524 aaPredicted RBP22.92■■□□□ 1.26
SMPD4-210ENST00000441135 KCNJ4P48050 445 aa22.91■■□□□ 1.26
SMPD4-210ENST00000441135 VEGFBP49765 207 aa22.91■■□□□ 1.26
SMPD4-210ENST00000441135 FMR1Q06787 632 aaKnown RBP eCLIP22.91■■□□□ 1.26
SMPD4-210ENST00000441135 CHRNDQ07001 517 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 1731.1 ms