RNA–Protein interactions for RNA: ENST00000440431.6

SCN3A-204, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 4,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-204ENST00000440431 HLA-DOAP06340 250 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 BICD2Q8TD16 824 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 EHMT1Q9H9B1 1298 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 ECHDC1Q9NTX5 307 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 SPATA31A5Q5VU36 1347 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 SPATA31A7Q8IWB4 1347 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 PI4KAP2A4QPH2 592 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 MBD3O95983 291 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 MX1P20591 662 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 IQCA1Q86XH1 822 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF444Q8N0Y2 327 aaPredicted RBP5.36□□□□□ -1.55
SCN3A-204ENST00000440431 ANKRD44Q8N8A2 993 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 PI4KAP1Q8N8J0 262 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 NAT10Q9H0A0 1025 aaKnown RBP5.36□□□□□ -1.55
SCN3A-204ENST00000440431 ZBTB3Q9H5J0 574 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 DCTPP1Q9H773 170 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 ABCF2Q9UG63 623 aa5.36□□□□□ -1.55
SCN3A-204ENST00000440431 PNMA6EA0A0J9YXQ4 647 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 NEK4P51957 841 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 RRP12Q5JTH9 1297 aaKnown RBP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 DZIP3Q86Y13 1208 aaKnown RBP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 SUPT20HQ8NEM7 779 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 EVI5LQ96CN4 794 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 ZMYND15Q9H091 742 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 CABP5Q9NP86 173 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 TFCP2L1Q9NZI6 479 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 UTRNP46939 3433 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 NBPF7P0C2Y1 421 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 PDE6BP35913 854 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 TNIP1Q15025 636 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 COPS6Q7L5N1 327 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 PTF1AQ7RTS3 328 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 CDK5RAP3Q96JB5 506 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 MPHOSPH6Q99547 160 aaKnown RBP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 NAPBQ9H115 298 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 GRM8O00222 908 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 POLA2Q14181 598 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 FNBP4Q8N3X1 1017 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 OGFOD1Q8N543 542 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 OTUD7AQ8TE49 926 aaPredicted RBP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 PIGBQ92521 554 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF622Q969S3 477 aaKnown RBP eCLIP5.35□□□□□ -1.55
SCN3A-204ENST00000440431 HOOK2Q96ED9 719 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 MKNK2Q9HBH9 465 aa5.35□□□□□ -1.55
SCN3A-204ENST00000440431 GSPT1P15170 499 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 NF2P35240 595 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 SASS6Q6UVJ0 657 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 ZNF804AQ7Z570 1209 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 C16orf71Q8IYS4 520 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 JDP2Q8WYK2 163 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 BMP2KQ9NSY1 1161 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 ATG3Q9NT62 314 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 CIZ1Q9ULV3 898 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 NIP7Q9Y221 180 aaKnown RBP eCLIP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 THRAP3Q9Y2W1 955 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 LAMB2P55268 1798 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 C4AP0C0L4 1744 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 C4BP0C0L5 1744 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 ATP2B2Q01814 1243 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 PDE4BQ07343 736 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 OLFM4Q6UX06 510 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 UBE3BQ7Z3V4 1068 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 TMTC2Q8N394 836 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 MARCH10Q8NA82 808 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 CCDC12Q8WUD4 166 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 ZC3H12CQ9C0D7 883 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 DNAI2Q9GZS0 605 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 CEP131Q9UPN4 1083 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 LRRFIP2Q9Y608 721 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 B4DLN1 442 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 GPTP24298 496 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 MRPL12P52815 198 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 RBM17Q96I25 401 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 CRNKL1Q9BZJ0 848 aaKnown RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 SH2B1Q9NRF2 756 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 HMG20BQ9P0W2 317 aa5.34□□□□□ -1.55
SCN3A-204ENST00000440431 CCNL1Q9UK58 526 aaPredicted RBP5.34□□□□□ -1.55
SCN3A-204ENST00000440431 COL15A1P39059 1388 aa5.34□□□□□ -1.56
SCN3A-204ENST00000440431 WDR33Q9C0J8 1336 aaKnown RBP5.34□□□□□ -1.56
SCN3A-204ENST00000440431 LRP5O75197 1615 aa5.34□□□□□ -1.56
SCN3A-204ENST00000440431 CCDC191Q8NCU4 936 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 PLBD2Q8NHP8 589 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 CTCFLQ8NI51 663 aaPredicted RBP5.33□□□□□ -1.56
SCN3A-204ENST00000440431 BRPF3Q9ULD4 1205 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 KAT6BQ8WYB5 2073 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 COL24A1Q17RW2 1714 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 KIF5BP33176 963 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 GNAQP50148 359 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 HMGN5P82970 282 aaKnown RBP5.33□□□□□ -1.56
SCN3A-204ENST00000440431 ATP8B2P98198 1209 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 FAM196AQ6ZSG2 479 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 CCDC87Q9NVE4 849 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 DACH1Q9UI36 760 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 CFAP45Q9UL16 551 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 ASAP1Q9ULH1 1129 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 MAST3O60307 1309 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 SCN7AQ01118 1682 aa5.33□□□□□ -1.56
SCN3A-204ENST00000440431 PES1O00541 588 aaKnown RBP5.33□□□□□ -1.56
SCN3A-204ENST00000440431 GNAT2P19087 354 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms