RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 CIAO1O76071 339 aa13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 HSP90AB4PQ58FF6 505 aa13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 CC2D2BQ6DHV5 1058 aa13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 SIRT2Q8IXJ6 389 aa13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 ZNF594Q96JF6 807 aaPredicted RBP13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 ATP6V0A2Q9Y487 856 aa13.1□□□□□ -0.31
HLA-DMB-259ENST00000438510 EYA2O00167 538 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 IL15P40933 162 aaPredicted RBP13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 HDAC1Q13547 482 aaPredicted RBP13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 CCDC88AQ3V6T2 1871 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 GRIPAP1Q4V328 841 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 KLHDC4Q8TBB5 520 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 SIL1Q9H173 461 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 RWDD1Q9H446 243 aaPredicted RBP13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 PA2G4Q9UQ80 394 aaKnown RBP13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 BCS1LQ9Y276 419 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 MROH5Q6ZUA9 1318 aa13.09□□□□□ -0.31
HLA-DMB-259ENST00000438510 MYH13Q9UKX3 1938 aa13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 SURF6O75683 361 aaKnown RBP13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 G3BP1Q13283 466 aaKnown RBP eCLIP13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 OS9Q13438 667 aaPredicted RBP13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 CCDC93Q567U6 631 aa13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 ERC1Q8IUD2 1116 aa13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 ANKRD2Q9GZV1 360 aa13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 NOP58Q9Y2X3 529 aaKnown RBP13.08□□□□□ -0.32
HLA-DMB-259ENST00000438510 C21orf2O43822 256 aa13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 METTL24Q5JXM2 366 aa13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 MINPP1Q9UNW1 487 aa13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 RIPOR2Q9Y4F9 1068 aa13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 DICER1Q9UPY3 1922 aaKnown RBP13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 XDHP47989 1333 aa13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 DUOX1Q9NRD9 1551 aa13.07□□□□□ -0.32
HLA-DMB-259ENST00000438510 RAB11FIP3O75154 756 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 CHRNDQ07001 517 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 LRRC24Q50LG9 513 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 RTKN2Q8IZC4 609 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 C7orf43Q8WVR3 580 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 GCC1Q96CN9 775 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 PUS3Q9BZE2 481 aaKnown RBP13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 ANKIB1Q9P2G1 1089 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 ZNF219Q9P2Y4 722 aaPredicted RBP13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 WWC3Q9ULE0 1092 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 EXOC6BQ9Y2D4 811 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 SBF1O95248 1867 aa13.06□□□□□ -0.32
HLA-DMB-259ENST00000438510 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 DPP8Q6V1X1 898 aaPredicted RBP13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 ATG9AQ7Z3C6 839 aa13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 PELP1Q8IZL8 1130 aaKnown RBP13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 MPNDQ8N594 471 aa13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 DCTPP1Q9H773 170 aa13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 PODXL2Q9NZ53 605 aa13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 CEP126Q9P2H0 1117 aa13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 NSFL1CQ9UNZ2 370 aaKnown RBP13.05□□□□□ -0.32
HLA-DMB-259ENST00000438510 CHD4Q14839 1912 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 PDE8BO95263 885 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 KCNJ4P48050 445 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 SUPT20HQ8NEM7 779 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 KIF1BPQ96EK5 621 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 CCDC136Q96JN2 1154 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 GGA1Q9UJY5 639 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 LEMD3Q9Y2U8 911 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 ZNF609O15014 1411 aa13.04□□□□□ -0.32
HLA-DMB-259ENST00000438510 TIAM2Q8IVF5 1701 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 ATP2B4P23634 1241 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 GPSM2P81274 684 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 PUM3Q15397 648 aaKnown RBP13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 GPR162Q16538 588 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 VGLL2Q8N8G2 317 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 PSMD1Q99460 953 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 LRRCC1Q9C099 1032 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 PPP4R2Q9NY27 417 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 ZBTB47Q9UFB7 747 aaPredicted RBP13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 AKAP2Q9Y2D5 859 aa13.03□□□□□ -0.32
HLA-DMB-259ENST00000438510 PSME4Q14997 1843 aa13.02□□□□□ -0.32
HLA-DMB-259ENST00000438510 GRIN3BO60391 1043 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 TAF5LO75529 589 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 UFL1O94874 794 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 SASH1O94885 1247 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 TFCP2Q12800 502 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 UBE4AQ14139 1066 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 SMC5Q8IY18 1101 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 HELBQ8NG08 1087 aaPredicted RBP13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 RHPN1Q8TCX5 695 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 EYA3Q99504 573 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 RTFDC1Q9BY42 306 aaPredicted RBP13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 TAOK3Q9H2K8 898 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 GPR108Q9NPR9 543 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 ZNF804BA4D1E1 1349 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 LTBP3Q9NS15 1303 aa13.02□□□□□ -0.33
HLA-DMB-259ENST00000438510 C6orf229H3BNL8 230 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 APBB1O00213 710 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 IGHDP01880 384 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 SLC5A1P13866 664 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 YBX3P16989 372 aaKnown RBP eCLIP13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 ATP2B3Q16720 1220 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 SLC51AQ86UW1 340 aa13.01□□□□□ -0.33
HLA-DMB-259ENST00000438510 CLASRPQ8N2M8 674 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms