RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 GCP02774 474 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 METAP2P50579 478 aaKnown RBP eCLIP7.74□□□□□ -1.171e-12■□□□□ 10.3
CSDE1-205ENST00000438362 PTH1RQ03431 593 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 ATL3Q6DD88 541 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 LEKR1Q6ZMV7 388 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 MICU3Q86XE3 530 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 RUFY1Q96T51 708 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 ZNHIT6Q9NWK9 470 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 LRP2BPQ9P2M1 347 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 ADGRB3O60242 1522 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 RIOK3O14730 519 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 SPTLC2O15270 562 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 NOM1Q5C9Z4 860 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 KLHL10Q6JEL2 608 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 KRT222Q8N1A0 295 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 NFATC2IPQ8NCF5 419 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 KLHDC4Q8TBB5 520 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 SUCLG2Q96I99 432 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 LSG1Q9H089 658 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 ZSWIM6Q9HCJ5 1215 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 IQSEC2Q5JU85 1478 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 IQGAP1P46940 1657 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 NAP1L1P55209 391 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 SSRP1Q08945 709 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 MAP3K12Q12852 859 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 BMS1Q14692 1282 aaKnown RBP7.74□□□□□ -1.17
CSDE1-205ENST00000438362 BEND3Q5T5X7 828 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 LDHAL6AQ6ZMR3 332 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 MTMR7Q9Y216 660 aa7.74□□□□□ -1.17
CSDE1-205ENST00000438362 TMEM2Q9UHN6 1383 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 ARHGAP31Q2M1Z3 1444 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 SLU7O95391 586 aaKnown RBP7.73□□□□□ -1.17
CSDE1-205ENST00000438362 CASQ1P31415 396 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 ZNF75DP51815 510 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 UBASH3AP57075 661 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 STIM1Q13586 685 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 CHST3Q7LGC8 479 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 SMAP1Q8IYB5 467 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-205ENST00000438362 NSFL1CQ9UNZ2 370 aaKnown RBP7.73□□□□□ -1.17
CSDE1-205ENST00000438362 MED14O60244 1454 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 QRICH2Q9H0J4 1663 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 GOLGA6L9A6NEM1 432 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 FAM160A1Q05DH4 1040 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 NBPF6Q5VWK0 638 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 NBPF4Q96M43 638 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 LLPHQ9BRT6 129 aaKnown RBP7.73□□□□□ -1.17
CSDE1-205ENST00000438362 ALG1Q9BT22 464 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 HECW2Q9P2P5 1572 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 ANKRD18BA2A2Z9 1011 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 PRC1O43663 620 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 LMOD1P29536 600 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-205ENST00000438362 TTF1Q15361 905 aaPredicted RBP7.73□□□□□ -1.17
CSDE1-205ENST00000438362 TNNI3KQ59H18 835 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 TMEM67Q5HYA8 995 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 CCDC129Q6ZRS4 1044 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 CCDC144CPQ8IYA2 1237 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 DBNDD2Q9BQY9 259 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 TMOD3Q9NYL9 352 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 FPGT-TNNI3KV9GXZ4 949 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 IGSF1Q8N6C5 1336 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 PRR36Q9H6K5 1346 aa7.73□□□□□ -1.17
CSDE1-205ENST00000438362 RNF113AO15541 343 aaKnown RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 KIF5CO60282 957 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 LIG1P18858 919 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 TTC6Q86TZ1 520 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 FEZ1Q99689 392 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 RAI14Q9P0K7 980 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 ABCF2Q9UG63 623 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 V9GYY5 206 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 TULP4Q9NRJ4 1543 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 JAK2O60674 1132 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 TUBB4AP04350 444 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 MARCKSP29966 332 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 KIF4BQ2VIQ3 1234 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 EAF2Q96CJ1 260 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 METTL22Q9BUU2 404 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 GTPBP4Q9BZE4 634 aaKnown RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 DNAI1Q9UI46 699 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 TPCN1Q9ULQ1 816 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 LRRC7Q96NW7 1537 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 CEP152O94986 1710 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 MINDY4BA8MYZ0 360 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 KCNQ3O43525 872 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 GNG11P61952 73 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 CHRNA2Q15822 529 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 HSP90AB3PQ58FF7 597 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 ZNF790Q6PG37 636 aa7.72□□□□□ -1.17
CSDE1-205ENST00000438362 TMX4Q9H1E5 349 aaPredicted RBP7.72□□□□□ -1.17
CSDE1-205ENST00000438362 A0A1B0GVL5 298 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 G3V3G9 751 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 ZBTB43O43298 467 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 IGHMBP2P38935 993 aaKnown RBP7.71□□□□□ -1.17
CSDE1-205ENST00000438362 ADCK5Q3MIX3 580 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 SAMD1Q6SPF0 538 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-205ENST00000438362 BRAPQ7Z569 592 aa7.71□□□□□ -1.17
CSDE1-205ENST00000438362 ZNF397Q8NF99 534 aaPredicted RBP7.71□□□□□ -1.17
CSDE1-205ENST00000438362 TSC1Q92574 1164 aa7.71□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms