RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 GOLGA8BA8MQT2 603 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 PPP2R3AQ06190 1150 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 ERMNQ8TAM6 284 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 PPP1R2P41236 205 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 CCDC186Q7Z3E2 898 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 LRP2BPQ9P2M1 347 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 PPFIA4O75335 1185 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 UBA7P41226 1012 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 MRPS9P82933 396 aaKnown RBP13.04□□□□□ -0.32
PTCH1-209ENST00000437951 HAUS8Q9BT25 410 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 NAPBQ9H115 298 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 PAXIP1Q6ZW49 1069 aaPredicted RBP13.04□□□□□ -0.32
PTCH1-209ENST00000437951 LRPPRCP42704 1394 aaKnown RBP13.04□□□□□ -0.32
PTCH1-209ENST00000437951 SLFN5Q08AF3 891 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 BICDL1Q6ZP65 573 aa13.04□□□□□ -0.32
PTCH1-209ENST00000437951 AMOTQ4VCS5 1084 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 ZNF213O14771 459 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 VIMP08670 466 aaKnown RBP13.03□□□□□ -0.32
PTCH1-209ENST00000437951 TCERG1LQ5VWI1 586 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 USP5P45974 858 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 UTP11Q9Y3A2 253 aaKnown RBP13.03□□□□□ -0.32
PTCH1-209ENST00000437951 GAS8O95995 478 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 DBN1Q16643 649 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 SYCP3Q8IZU3 236 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 RAD50Q92878 1312 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 CETN3O15182 167 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 SLC4A8Q2Y0W8 1093 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 CYB5RLQ6IPT4 315 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 UBLCP1Q8WVY7 318 aaPredicted RBP13.03□□□□□ -0.32
PTCH1-209ENST00000437951 CCDC42Q96M95 316 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 LRRC9Q6ZRR7 1453 aa13.03□□□□□ -0.32
PTCH1-209ENST00000437951 PDE1CQ14123 709 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-209ENST00000437951 TMOD2Q9NZR1 351 aa13.02□□□□□ -0.32
PTCH1-209ENST00000437951 CASKIN1Q8WXD9 1431 aa13.02□□□□□ -0.32
PTCH1-209ENST00000437951 PPP1R7Q15435 360 aa13.02□□□□□ -0.32
PTCH1-209ENST00000437951 ZSCAN29Q8IWY8 852 aaPredicted RBP13.02□□□□□ -0.32
PTCH1-209ENST00000437951 SLF2Q8IX21 1173 aa13.02□□□□□ -0.32
PTCH1-209ENST00000437951 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.32
PTCH1-209ENST00000437951 DAPK1P53355 1430 aa13.02□□□□□ -0.32
PTCH1-209ENST00000437951 TTF1Q15361 905 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-209ENST00000437951 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 IMPACTQ9P2X3 320 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 TTF2Q9UNY4 1162 aaKnown RBP13.02□□□□□ -0.33
PTCH1-209ENST00000437951 ERBINQ96RT1 1412 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 FCHSD2O94868 740 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 SATB1Q01826 763 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 PTPRCP08575 1304 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 SDCCAG8Q86SQ7 713 aaPredicted RBP13.02□□□□□ -0.33
PTCH1-209ENST00000437951 SYNCQ9H7C4 482 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 TACC3Q9Y6A5 838 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 EVCP57679 992 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 WHAMMQ8TF30 809 aa13.02□□□□□ -0.33
PTCH1-209ENST00000437951 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.02□□□□□ -0.33
PTCH1-209ENST00000437951 SUPT6HQ7KZ85 1726 aaKnown RBP13.02□□□□□ -0.33
PTCH1-209ENST00000437951 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 TBCAO75347 108 aaKnown RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 NBPF7P0C2Y1 421 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 MUM1Q2TAK8 710 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 SEL1L2Q5TEA6 688 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 ARHGEF2Q92974 986 aaKnown RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 TSKSQ9UJT2 592 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 SPTY2D1Q68D10 685 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 CCDC170Q8IYT3 715 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 TRAF1Q13077 416 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 IGHMBP2P38935 993 aaKnown RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 MAP3K12Q12852 859 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 ZNF692Q9BU19 519 aaPredicted RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 IARSP41252 1262 aaKnown RBP13.01□□□□□ -0.33
PTCH1-209ENST00000437951 TMEM57Q8N5G2 664 aa13.01□□□□□ -0.33
PTCH1-209ENST00000437951 BIN1O00499 593 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 MAP3K7CLP57077 242 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 VWA3BQ502W6 1294 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 GTF3C6Q969F1 213 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 EHBP1L1Q8N3D4 1523 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 STAT6P42226 847 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 LRRD1A4D1F6 860 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 CABS1Q96KC9 395 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 NAPGQ99747 312 aaPredicted RBP13□□□□□ -0.33
PTCH1-209ENST00000437951 CHMP4BP1P59074 171 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 IFT81Q8WYA0 676 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 PFDN1O60925 122 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 RUFY3Q7L099 469 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 CCT6BQ92526 530 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 I3L4J1 428 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 RTL1A6NKG5 1358 aa13□□□□□ -0.33
PTCH1-209ENST00000437951 GOLGA6BA6NDN3 693 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 HIP1RO75146 1068 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 TYRO3Q06418 890 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 ZNF569Q5MCW4 686 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 NEK11Q8NG66 645 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 WDR78Q5VTH9 848 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 GIMAP6Q6P9H5 292 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 MKNK2Q9HBH9 465 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 ARL1P40616 181 aaPredicted RBP12.99□□□□□ -0.33
PTCH1-209ENST00000437951 RRAGBQ5VZM2 374 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 TMTC2Q8N394 836 aa12.99□□□□□ -0.33
PTCH1-209ENST00000437951 TSR2Q969E8 191 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms