RNA–Protein interactions for RNA: ENST00000437892.1

LINC00858-202, long intergenic non-protein coding RNA 858, humanhuman

TSL 3

Gene LINC00858, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00858-202ENST00000437892 MFRPQ9BY79 579 aa11.72□□□□□ -0.53
LINC00858-202ENST00000437892 NARFQ9UHQ1 456 aa11.72□□□□□ -0.53
LINC00858-202ENST00000437892 TRMT112Q9UI30 125 aaKnown RBP11.72□□□□□ -0.53
LINC00858-202ENST00000437892 RIC1Q4ADV7 1423 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 RFX7Q2KHR2 1363 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 ABCC12Q96J65 1359 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 EYA2O00167 538 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
LINC00858-202ENST00000437892 EPB41L2O43491 1005 aaKnown RBP11.71□□□□□ -0.53
LINC00858-202ENST00000437892 NTSR2O95665 410 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 GPTP24298 496 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 CCDC57Q2TAC2 916 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 FAM182BQ5T319 152 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 ATG9AQ7Z3C6 839 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 AACSQ86V21 672 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 NUTM1Q86Y26 1132 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 TTLL11Q8NHH1 800 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 JARID2Q92833 1246 aaPredicted RBP11.71□□□□□ -0.53
LINC00858-202ENST00000437892 EAF2Q96CJ1 260 aaPredicted RBP11.71□□□□□ -0.53
LINC00858-202ENST00000437892 UTP14AQ9BVJ6 771 aaKnown RBP11.71□□□□□ -0.53
LINC00858-202ENST00000437892 SIL1Q9H173 461 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 UBR3Q6ZT12 1888 aa11.71□□□□□ -0.53
LINC00858-202ENST00000437892 SPEF2Q9C093 1822 aa11.7□□□□□ -0.54
LINC00858-202ENST00000437892 TNS1Q9HBL0 1735 aaKnown RBP11.7□□□□□ -0.54
LINC00858-202ENST00000437892 MFAP1P55081 439 aaKnown RBP11.7□□□□□ -0.54
LINC00858-202ENST00000437892 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
LINC00858-202ENST00000437892 TNNI3KQ59H18 835 aa11.7□□□□□ -0.54
LINC00858-202ENST00000437892 KLHDC4Q8TBB5 520 aa11.7□□□□□ -0.54
LINC00858-202ENST00000437892 ARXQ96QS3 562 aa11.7□□□□□ -0.54
LINC00858-202ENST00000437892 C22orf23Q9BZE7 217 aa11.7□□□□□ -0.54
LINC00858-202ENST00000437892 RTCBQ9Y3I0 505 aaKnown RBP11.7□□□□□ -0.54
LINC00858-202ENST00000437892 FPGT-TNNI3KV9GXZ4 949 aa11.7□□□□□ -0.54
LINC00858-202ENST00000437892 GNPATO15228 680 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 REC8O95072 547 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 SUSD4Q5VX71 490 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 TSHZ3Q63HK5 1081 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 CNTROBQ8N137 903 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 FBXO41Q8TF61 875 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 NIP7Q9Y221 180 aaKnown RBP eCLIP11.69□□□□□ -0.54
LINC00858-202ENST00000437892 CHMP3Q9Y3E7 222 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.69□□□□□ -0.54
LINC00858-202ENST00000437892 ARAP2Q8WZ64 1704 aa11.69□□□□□ -0.54
LINC00858-202ENST00000437892 AK9Q5TCS8 1911 aa11.68□□□□□ -0.54
LINC00858-202ENST00000437892 EP400Q96L91 3159 aa11.68□□□□□ -0.54
LINC00858-202ENST00000437892 ATP5JP18859 108 aa11.68□□□□□ -0.54
LINC00858-202ENST00000437892 CHMLP26374 656 aa11.68□□□□□ -0.54
LINC00858-202ENST00000437892 TFCP2Q12800 502 aa11.68□□□□□ -0.54
LINC00858-202ENST00000437892 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
LINC00858-202ENST00000437892 BCL2L12Q9HB09 334 aa11.68□□□□□ -0.54
LINC00858-202ENST00000437892 DBNLQ9UJU6 430 aaKnown RBP11.68□□□□□ -0.54
LINC00858-202ENST00000437892 ANKRD18BA2A2Z9 1011 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 ITGA6P23229 1130 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 SSFA2P28290 1259 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 RXRBP28702 533 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 EVI5LQ96CN4 794 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 NYXQ9GZU5 481 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 GREM2Q9H772 168 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 LRRC4BQ9NT99 713 aa11.67□□□□□ -0.54
LINC00858-202ENST00000437892 TLR7Q9NYK1 1049 aaKnown RBP11.67□□□□□ -0.54
LINC00858-202ENST00000437892 RAD50Q92878 1312 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 TRIM6-TRIM34B2RNG4 842 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 HIP1O00291 1037 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 PLSCR1O15162 318 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 ZPR1O75312 459 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 CCDC152Q4G0S7 254 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 SLC10A5Q5PT55 438 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 SYNE4Q8N205 404 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.66□□□□□ -0.54
LINC00858-202ENST00000437892 IL17RAQ96F46 866 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 ESYT1Q9BSJ8 1104 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 AKAP2Q9Y2D5 859 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 CARMIL3Q8ND23 1372 aa11.66□□□□□ -0.54
LINC00858-202ENST00000437892 CASZ1Q86V15 1759 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 KCNQ4P56696 695 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 SF3B3Q15393 1217 aaKnown RBP11.65□□□□□ -0.54
LINC00858-202ENST00000437892 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 TAF7LQ5H9L4 462 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 IL27Q8NEV9 243 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 TMEM121BQ9BXQ6 578 aaPredicted RBP11.65□□□□□ -0.54
LINC00858-202ENST00000437892 SNRKQ9NRH2 765 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 CEP126Q9P2H0 1117 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.54
LINC00858-202ENST00000437892 MROH5Q6ZUA9 1318 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 TRIM37O94972 964 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 BECN1Q14457 450 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 TRAPPC3LQ5T215 181 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 USPL1Q5W0Q7 1092 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 AMIGO3Q86WK7 504 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 VGLL2Q8N8G2 317 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 ARHGEF1Q92888 912 aaKnown RBP11.64□□□□□ -0.55
LINC00858-202ENST00000437892 RILPL2Q969X0 211 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 ZNF594Q96JF6 807 aaPredicted RBP11.64□□□□□ -0.55
LINC00858-202ENST00000437892 HAUS7Q99871 368 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 USP26Q9BXU7 913 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 CCDC8Q9H0W5 538 aaPredicted RBP11.64□□□□□ -0.55
LINC00858-202ENST00000437892 BCL11AQ9H165 835 aa11.64□□□□□ -0.55
LINC00858-202ENST00000437892 A0A1B0GUL7 405 aa11.63□□□□□ -0.55
LINC00858-202ENST00000437892 SGSM2O43147 1006 aa11.63□□□□□ -0.55
LINC00858-202ENST00000437892 RFC4P35249 363 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms