RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 POLLQ9UGP5 575 aa18.43■□□□□ 0.54
LINC01088-201ENST00000437737 GPSM2P81274 684 aa18.42■□□□□ 0.54
LINC01088-201ENST00000437737 HPS5Q9UPZ3 1129 aa18.42■□□□□ 0.54
LINC01088-201ENST00000437737 SCN9AQ15858 1988 aa18.42■□□□□ 0.54
LINC01088-201ENST00000437737 G3V3G9 751 aa18.41■□□□□ 0.54
LINC01088-201ENST00000437737 DCAF8Q5TAQ9 597 aa18.41■□□□□ 0.54
LINC01088-201ENST00000437737 RASAL3Q86YV0 1011 aa18.41■□□□□ 0.54
LINC01088-201ENST00000437737 HDAC9Q9UKV0 1011 aa18.41■□□□□ 0.54
LINC01088-201ENST00000437737 ASTN2O75129 1339 aaPredicted RBP18.4■□□□□ 0.54
LINC01088-201ENST00000437737 PAPPA2Q9BXP8 1791 aa18.4■□□□□ 0.54
LINC01088-201ENST00000437737 COL4A1P02462 1669 aa18.39■□□□□ 0.53
LINC01088-201ENST00000437737 SF3B3Q15393 1217 aaKnown RBP18.39■□□□□ 0.53
LINC01088-201ENST00000437737 ANGEL2Q5VTE6 544 aaKnown RBP18.39■□□□□ 0.53
LINC01088-201ENST00000437737 TBC1D16Q8TBP0 767 aa18.39■□□□□ 0.53
LINC01088-201ENST00000437737 FAM89AQ96GI7 184 aa18.39■□□□□ 0.53
LINC01088-201ENST00000437737 ZC3H12CQ9C0D7 883 aaKnown RBP18.39■□□□□ 0.53
LINC01088-201ENST00000437737 VIL1P09327 827 aaKnown RBP18.38■□□□□ 0.53
LINC01088-201ENST00000437737 RIPK4P57078 832 aa18.38■□□□□ 0.53
LINC01088-201ENST00000437737 PKN2Q16513 984 aaKnown RBP18.38■□□□□ 0.53
LINC01088-201ENST00000437737 BABAM1Q9NWV8 329 aa18.38■□□□□ 0.53
LINC01088-201ENST00000437737 FKBP1BP68106 108 aa18.37■□□□□ 0.53
LINC01088-201ENST00000437737 SCARF1Q14162 830 aa18.37■□□□□ 0.53
LINC01088-201ENST00000437737 RTL5Q5HYW3 569 aaPredicted RBP18.37■□□□□ 0.53
LINC01088-201ENST00000437737 PSME4Q14997 1843 aa18.37■□□□□ 0.53
LINC01088-201ENST00000437737 ATP5J2-PTCD1G3V325 749 aa18.36■□□□□ 0.53
LINC01088-201ENST00000437737 PLBD2Q8NHP8 589 aa18.36■□□□□ 0.53
LINC01088-201ENST00000437737 ZNF296Q8WUU4 475 aaPredicted RBP18.36■□□□□ 0.53
LINC01088-201ENST00000437737 CHPF2Q9P2E5 772 aa18.36■□□□□ 0.53
LINC01088-201ENST00000437737 UFL1O94874 794 aa18.35■□□□□ 0.53
LINC01088-201ENST00000437737 TBC1D8O95759 1140 aa18.35■□□□□ 0.53
LINC01088-201ENST00000437737 RPS8P62241 208 aaKnown RBP18.35■□□□□ 0.53
LINC01088-201ENST00000437737 LMOD3Q0VAK6 560 aa18.35■□□□□ 0.53
LINC01088-201ENST00000437737 ANKIB1Q9P2G1 1089 aa18.35■□□□□ 0.53
LINC01088-201ENST00000437737 ZNF280AP59817 542 aaPredicted RBP18.34■□□□□ 0.53
LINC01088-201ENST00000437737 RSBN1LQ6PCB5 846 aaPredicted RBP18.34■□□□□ 0.53
LINC01088-201ENST00000437737 ANKRD13DQ6ZTN6 518 aa18.34■□□□□ 0.53
LINC01088-201ENST00000437737 AGBL3Q8NEM8 1001 aa18.34■□□□□ 0.53
LINC01088-201ENST00000437737 ISCA1Q9BUE6 129 aa18.34■□□□□ 0.53
LINC01088-201ENST00000437737 IRS4O14654 1257 aaPredicted RBP18.33■□□□□ 0.52
LINC01088-201ENST00000437737 KRT24Q2M2I5 525 aa18.33■□□□□ 0.52
LINC01088-201ENST00000437737 MOB2Q70IA6 237 aa18.33■□□□□ 0.52
LINC01088-201ENST00000437737 PODXL2Q9NZ53 605 aa18.33■□□□□ 0.52
LINC01088-201ENST00000437737 GGA1Q9UJY5 639 aa18.33■□□□□ 0.52
LINC01088-201ENST00000437737 ZNF609O15014 1411 aa18.32■□□□□ 0.52
LINC01088-201ENST00000437737 PITPNM2Q9BZ72 1349 aa18.32■□□□□ 0.52
LINC01088-201ENST00000437737 TTLL12Q14166 644 aaPredicted RBP18.32■□□□□ 0.52
LINC01088-201ENST00000437737 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
LINC01088-201ENST00000437737 MYOZ2Q9NPC6 264 aa18.32■□□□□ 0.52
LINC01088-201ENST00000437737 SCAF8Q9UPN6 1271 aaKnown RBP18.32■□□□□ 0.52
LINC01088-201ENST00000437737 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
LINC01088-201ENST00000437737 UBE2Q2LH0YL09 131 aa18.31■□□□□ 0.52
LINC01088-201ENST00000437737 USP17L8P0C7I0 530 aa18.31■□□□□ 0.52
LINC01088-201ENST00000437737 FBXO46Q6PJ61 603 aaPredicted RBP18.31■□□□□ 0.52
LINC01088-201ENST00000437737 GCC1Q96CN9 775 aa18.31■□□□□ 0.52
LINC01088-201ENST00000437737 GPR25O00155 361 aa18.3■□□□□ 0.52
LINC01088-201ENST00000437737 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
LINC01088-201ENST00000437737 SEC31BQ9NQW1 1179 aa18.3■□□□□ 0.52
LINC01088-201ENST00000437737 DBF4Q9UBU7 674 aaPredicted RBP18.3■□□□□ 0.52
LINC01088-201ENST00000437737 MKRN3Q13064 507 aaKnown RBP18.29■□□□□ 0.52
LINC01088-201ENST00000437737 PRAMEF18Q5VWM3 479 aa18.29■□□□□ 0.52
LINC01088-201ENST00000437737 HSP90B1P14625 803 aaKnown RBP18.28■□□□□ 0.52
LINC01088-201ENST00000437737 NF2P35240 595 aa18.28■□□□□ 0.52
LINC01088-201ENST00000437737 NEUROD2Q15784 382 aa18.28■□□□□ 0.52
LINC01088-201ENST00000437737 USP17L3A6NCW0 530 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 USP17L4A6NCW7 530 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 CHL1O00533 1208 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 FKTNO75072 461 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 TM4SF4P48230 202 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 SREBF2Q12772 1141 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 NOM1Q5C9Z4 860 aaKnown RBP18.27■□□□□ 0.52
LINC01088-201ENST00000437737 USP17L1Q7RTZ2 530 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 GMLQ99445 158 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 HYPKQ9NX55 129 aa18.27■□□□□ 0.52
LINC01088-201ENST00000437737 TRIM28Q13263 835 aaKnown RBP18.26■□□□□ 0.51
LINC01088-201ENST00000437737 CCDC152Q4G0S7 254 aa18.26■□□□□ 0.51
LINC01088-201ENST00000437737 RIC3Q7Z5B4 369 aa18.26■□□□□ 0.51
LINC01088-201ENST00000437737 ZBTB38Q8NAP3 1195 aaPredicted RBP18.26■□□□□ 0.51
LINC01088-201ENST00000437737 CCDC85AQ96PX6 553 aaPredicted RBP18.26■□□□□ 0.51
LINC01088-201ENST00000437737 XDHP47989 1333 aa18.25■□□□□ 0.51
LINC01088-201ENST00000437737 HOXB7P09629 217 aa18.25■□□□□ 0.51
LINC01088-201ENST00000437737 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
LINC01088-201ENST00000437737 PODNQ7Z5L7 613 aa18.25■□□□□ 0.51
LINC01088-201ENST00000437737 SPEF2Q9C093 1822 aa18.24■□□□□ 0.51
LINC01088-201ENST00000437737 ATP2B4P23634 1241 aa18.24■□□□□ 0.51
LINC01088-201ENST00000437737 GOLGA2Q08379 1002 aa18.24■□□□□ 0.51
LINC01088-201ENST00000437737 ANKRD18AQ8IVF6 992 aa18.24■□□□□ 0.51
LINC01088-201ENST00000437737 OGFOD1Q8N543 542 aa18.24■□□□□ 0.51
LINC01088-201ENST00000437737 FBXW7Q969H0 707 aa18.24■□□□□ 0.51
LINC01088-201ENST00000437737 PRKG1Q13976 671 aa18.23■□□□□ 0.51
LINC01088-201ENST00000437737 DIEXFQ68CQ4 756 aaKnown RBP18.23■□□□□ 0.51
LINC01088-201ENST00000437737 CCDC146Q8IYE0 955 aa18.23■□□□□ 0.51
LINC01088-201ENST00000437737 PDE8AO60658 829 aa18.22■□□□□ 0.51
LINC01088-201ENST00000437737 DDX10Q13206 875 aaKnown RBP18.22■□□□□ 0.51
LINC01088-201ENST00000437737 ARMC9Q7Z3E5 817 aa18.22■□□□□ 0.51
LINC01088-201ENST00000437737 MYD88Q99836 296 aa18.22■□□□□ 0.51
LINC01088-201ENST00000437737 CFHR5Q9BXR6 569 aa18.22■□□□□ 0.51
LINC01088-201ENST00000437737 ZNF646O15015 1829 aaPredicted RBP18.21■□□□□ 0.51
LINC01088-201ENST00000437737 WNT10BO00744 389 aa18.21■□□□□ 0.51
LINC01088-201ENST00000437737 PTPN12Q05209 780 aaKnown RBP18.21■□□□□ 0.51
LINC01088-201ENST00000437737 HABP4Q5JVS0 413 aaKnown RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms