RNA–Protein interactions for RNA: ENST00000436712.2

GAPVD1-209, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5

Gene GAPVD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-209ENST00000436712 FILIP1Q7Z7B0 1213 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 CADPS2Q86UW7 1296 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 MICALL1Q8N3F8 863 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 PRPF38AQ8NAV1 312 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 ARMC2Q8NEN0 867 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 KCNB2Q92953 911 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 HMOX1P09601 288 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 ERCC6LQ2NKX8 1250 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 TBC1D25Q3MII6 688 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 CWC27Q6UX04 472 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 LRRC31Q6UY01 552 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 MSL3Q8N5Y2 521 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 CTCFLQ8NI51 663 aaPredicted RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 RBM42Q9BTD8 480 aaKnown RBP9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 TRIM35Q9UPQ4 493 aa9.28□□□□□ -0.92
GAPVD1-209ENST00000436712 AP5Z1O43299 807 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 TMPOP42166 694 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 CCNHP51946 323 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 NYAP1Q6ZVC0 841 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 TMCO5BA8MYB1 307 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 DIAPH1O60610 1272 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 ERLIN2O94905 339 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 CHMLP26374 656 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 PLCB2Q00722 1185 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 PTPN14Q15678 1187 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 CCDC183Q5T5S1 534 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 KCNV1Q6PIU1 500 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 CPLX2Q6PUV4 134 aaKnown RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 KRT28Q7Z3Y7 464 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 DRAXINQ8NBI3 349 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 KAT2BQ92831 832 aa9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 BAG1Q99933 345 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 COL3A1P02461 1466 aaPredicted RBP9.27□□□□□ -0.93
GAPVD1-209ENST00000436712 TTC21AQ8NDW8 1320 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 PEAK1Q9H792 1746 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 MARF1Q9Y4F3 1742 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 RTN2O75298 545 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 SNUPNO95149 360 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 GPTP24298 496 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 ZRSR2Q15696 482 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 PLEKHO1Q53GL0 409 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 FOXR1Q6PIV2 292 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 N4BP2L2Q92802 583 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 LTV1Q96GA3 475 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 JPH2Q9BR39 696 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 TMX4Q9H1E5 349 aaPredicted RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 L2HGDHQ9H9P8 463 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 CHCHD3Q9NX63 227 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 ZNF232Q9UNY5 417 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 AATKQ6ZMQ8 1374 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 SKILP12757 684 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 CASTP20810 708 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 MRPL12P52815 198 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 LRMPQ12912 555 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 ARHGAP29Q52LW3 1261 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 RPUSD2Q8IZ73 545 aaKnown RBP9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 CLIP2Q9UDT6 1046 aa9.26□□□□□ -0.93
GAPVD1-209ENST00000436712 MAP3K19Q56UN5 1328 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 NPHP1O15259 732 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 NF2P35240 595 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 EXOSC9Q06265 439 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 DDR1Q08345 913 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 SCRN1Q12765 414 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 ZSCAN25Q6NSZ9 544 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 DDX46Q7L014 1031 aaKnown RBP9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 CABLES1Q8TDN4 633 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 PCDHGA4Q9Y5G9 962 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 AP1G2O75843 785 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 ECEL1O95672 775 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 TBC1D8O95759 1140 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 MICAL1Q8TDZ2 1067 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 MAF1Q9H063 256 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 TBC1D2BQ9UPU7 963 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 IL16Q14005 1332 aa9.25□□□□□ -0.93
GAPVD1-209ENST00000436712 AMPHP49418 695 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 AMOTQ4VCS5 1084 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 NFXL1Q6ZNB6 911 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 BRINP3Q76B58 766 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 ANKRD18AQ8IVF6 992 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 SASH3O75995 380 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 PECAM1P16284 738 aaPredicted RBP9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 PRPHP41219 470 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 SSH1Q8WYL5 1049 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 DDX11Q96FC9 970 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 CHAMP1Q96JM3 812 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 SLAIN2Q9P270 581 aa9.24□□□□□ -0.93
GAPVD1-209ENST00000436712 KIF1AQ12756 1690 aa9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 EME2A4GXA9 379 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 MX1P20591 662 aa9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 PREPLQ4J6C6 727 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 MMTAG2Q9BU76 263 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 ORC3Q9UBD5 711 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 DCCP43146 1447 aa9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 CDK12Q9NYV4 1490 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 ANKRD65E5RJM6 399 aa9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 EIF4A2Q14240 407 aaKnown RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 BMP2KLQ5H9B9 411 aa9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.23□□□□□ -0.93
GAPVD1-209ENST00000436712 NCAPG2Q86XI2 1143 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms