RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 TMPOP42166 694 aaKnown RBP19.37■□□□□ 0.69
HDAC8-213ENST00000436675 EYA3Q99504 573 aa19.37■□□□□ 0.69
HDAC8-213ENST00000436675 SAGE1Q9NXZ1 904 aa19.37■□□□□ 0.69
HDAC8-213ENST00000436675 GGA3Q9NZ52 723 aa19.37■□□□□ 0.69
HDAC8-213ENST00000436675 SF3B3Q15393 1217 aaKnown RBP19.36■□□□□ 0.69
HDAC8-213ENST00000436675 SULF1Q8IWU6 871 aa19.36■□□□□ 0.69
HDAC8-213ENST00000436675 TBC1D16Q8TBP0 767 aa19.36■□□□□ 0.69
HDAC8-213ENST00000436675 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
HDAC8-213ENST00000436675 G3V3G9 751 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 SLC10A3P09131 477 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 DCAF8Q5TAQ9 597 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 ANKRD13DQ6ZTN6 518 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 CCDC146Q8IYE0 955 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 PLBD2Q8NHP8 589 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 CDCA5Q96FF9 252 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 CSRNP1Q96S65 589 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 ISCA1Q9BUE6 129 aa19.35■□□□□ 0.69
HDAC8-213ENST00000436675 LMOD3Q0VAK6 560 aa19.34■□□□□ 0.69
HDAC8-213ENST00000436675 HDGFL1Q5TGJ6 251 aa19.34■□□□□ 0.69
HDAC8-213ENST00000436675 ZC3H12CQ9C0D7 883 aaKnown RBP19.34■□□□□ 0.69
HDAC8-213ENST00000436675 PCDH10Q9P2E7 1040 aa19.34■□□□□ 0.69
HDAC8-213ENST00000436675 IRS4O14654 1257 aaPredicted RBP19.33■□□□□ 0.68
HDAC8-213ENST00000436675 RPS8P62241 208 aaKnown RBP19.33■□□□□ 0.68
HDAC8-213ENST00000436675 SEC31BQ9NQW1 1179 aa19.33■□□□□ 0.68
HDAC8-213ENST00000436675 SCAF8Q9UPN6 1271 aaKnown RBP19.33■□□□□ 0.68
HDAC8-213ENST00000436675 UFL1O94874 794 aa19.32■□□□□ 0.68
HDAC8-213ENST00000436675 VIL1P09327 827 aaKnown RBP19.32■□□□□ 0.68
HDAC8-213ENST00000436675 ANGEL2Q5VTE6 544 aaKnown RBP19.32■□□□□ 0.68
HDAC8-213ENST00000436675 CHL1O00533 1208 aa19.31■□□□□ 0.68
HDAC8-213ENST00000436675 SCARF1Q14162 830 aa19.31■□□□□ 0.68
HDAC8-213ENST00000436675 CTU1Q7Z7A3 348 aaKnown RBP19.31■□□□□ 0.68
HDAC8-213ENST00000436675 RASAL3Q86YV0 1011 aa19.31■□□□□ 0.68
HDAC8-213ENST00000436675 ANKIB1Q9P2G1 1089 aa19.31■□□□□ 0.68
HDAC8-213ENST00000436675 MOB2Q70IA6 237 aa19.3■□□□□ 0.68
HDAC8-213ENST00000436675 CCDC85AQ96PX6 553 aaPredicted RBP19.3■□□□□ 0.68
HDAC8-213ENST00000436675 JARID2Q92833 1246 aaPredicted RBP19.29■□□□□ 0.68
HDAC8-213ENST00000436675 DBF4Q9UBU7 674 aaPredicted RBP19.29■□□□□ 0.68
HDAC8-213ENST00000436675 GGA1Q9UJY5 639 aa19.29■□□□□ 0.68
HDAC8-213ENST00000436675 PRAMEF18Q5VWM3 479 aa19.28■□□□□ 0.68
HDAC8-213ENST00000436675 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
HDAC8-213ENST00000436675 PSME4Q14997 1843 aa19.28■□□□□ 0.68
HDAC8-213ENST00000436675 UBE2Q2LH0YL09 131 aa19.27■□□□□ 0.68
HDAC8-213ENST00000436675 ZNF280AP59817 542 aaPredicted RBP19.27■□□□□ 0.68
HDAC8-213ENST00000436675 RIC3Q7Z5B4 369 aa19.27■□□□□ 0.68
HDAC8-213ENST00000436675 HYPKQ9NX55 129 aa19.27■□□□□ 0.68
HDAC8-213ENST00000436675 PODXL2Q9NZ53 605 aa19.27■□□□□ 0.68
HDAC8-213ENST00000436675 TRIM35Q9UPQ4 493 aa19.27■□□□□ 0.68
HDAC8-213ENST00000436675 HPS5Q9UPZ3 1129 aa19.27■□□□□ 0.68
HDAC8-213ENST00000436675 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
HDAC8-213ENST00000436675 HDAC9Q9UKV0 1011 aa19.26■□□□□ 0.67
HDAC8-213ENST00000436675 PAPPA2Q9BXP8 1791 aa19.26■□□□□ 0.67
HDAC8-213ENST00000436675 MKRN3Q13064 507 aaKnown RBP19.25■□□□□ 0.67
HDAC8-213ENST00000436675 DUSP27Q5VZP5 1158 aa19.25■□□□□ 0.67
HDAC8-213ENST00000436675 AGBL3Q8NEM8 1001 aa19.25■□□□□ 0.67
HDAC8-213ENST00000436675 MYOZ2Q9NPC6 264 aa19.25■□□□□ 0.67
HDAC8-213ENST00000436675 USP17L8P0C7I0 530 aa19.24■□□□□ 0.67
HDAC8-213ENST00000436675 TRIM28Q13263 835 aaKnown RBP19.24■□□□□ 0.67
HDAC8-213ENST00000436675 TTLL12Q14166 644 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-213ENST00000436675 REM2Q8IYK8 340 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-213ENST00000436675 ZBTB38Q8NAP3 1195 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-213ENST00000436675 ZNF296Q8WUU4 475 aaPredicted RBP19.24■□□□□ 0.67
HDAC8-213ENST00000436675 MYD88Q99836 296 aa19.24■□□□□ 0.67
HDAC8-213ENST00000436675 GOLGA2Q08379 1002 aa19.23■□□□□ 0.67
HDAC8-213ENST00000436675 CCDC152Q4G0S7 254 aa19.23■□□□□ 0.67
HDAC8-213ENST00000436675 PRPF38BQ5VTL8 546 aaKnown RBP19.23■□□□□ 0.67
HDAC8-213ENST00000436675 GMLQ99445 158 aa19.23■□□□□ 0.67
HDAC8-213ENST00000436675 PHAXQ9H814 394 aaKnown RBP19.23■□□□□ 0.67
HDAC8-213ENST00000436675 SPEF2Q9C093 1822 aa19.23■□□□□ 0.67
HDAC8-213ENST00000436675 WTIPA6NIX2 430 aaPredicted RBP19.22■□□□□ 0.67
HDAC8-213ENST00000436675 HOXB7P09629 217 aa19.22■□□□□ 0.67
HDAC8-213ENST00000436675 FKBP1BP68106 108 aa19.22■□□□□ 0.67
HDAC8-213ENST00000436675 NBPF9Q3BBW0 867 aa19.22■□□□□ 0.67
HDAC8-213ENST00000436675 FBXW7Q969H0 707 aa19.22■□□□□ 0.67
HDAC8-213ENST00000436675 MXD3Q9BW11 206 aa19.22■□□□□ 0.67
HDAC8-213ENST00000436675 USP17L3A6NCW0 530 aa19.21■□□□□ 0.67
HDAC8-213ENST00000436675 USP17L4A6NCW7 530 aa19.21■□□□□ 0.67
HDAC8-213ENST00000436675 ELL2O00472 640 aaPredicted RBP19.21■□□□□ 0.67
HDAC8-213ENST00000436675 USP17L1Q7RTZ2 530 aa19.21■□□□□ 0.67
HDAC8-213ENST00000436675 RUNDC1Q96C34 613 aa19.21■□□□□ 0.67
HDAC8-213ENST00000436675 XDHP47989 1333 aa19.21■□□□□ 0.67
HDAC8-213ENST00000436675 PITPNM2Q9BZ72 1349 aa19.21■□□□□ 0.67
HDAC8-213ENST00000436675 PDE8AO60658 829 aa19.2■□□□□ 0.66
HDAC8-213ENST00000436675 RALBP1Q15311 655 aa19.2■□□□□ 0.66
HDAC8-213ENST00000436675 ANKRD18AQ8IVF6 992 aa19.2■□□□□ 0.66
HDAC8-213ENST00000436675 MBIPQ9NS73 344 aa19.2■□□□□ 0.66
HDAC8-213ENST00000436675 ZNF609O15014 1411 aa19.19■□□□□ 0.66
HDAC8-213ENST00000436675 PCCAP05165 728 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-213ENST00000436675 HSP90B1P14625 803 aaKnown RBP19.19■□□□□ 0.66
HDAC8-213ENST00000436675 PRKG1Q13976 671 aa19.19■□□□□ 0.66
HDAC8-213ENST00000436675 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.19■□□□□ 0.66
HDAC8-213ENST00000436675 ATP2B4P23634 1241 aa19.18■□□□□ 0.66
HDAC8-213ENST00000436675 WDR43Q15061 677 aaKnown RBP eCLIP19.18■□□□□ 0.66
HDAC8-213ENST00000436675 PKN2Q16513 984 aaKnown RBP19.18■□□□□ 0.66
HDAC8-213ENST00000436675 PODNQ7Z5L7 613 aa19.18■□□□□ 0.66
HDAC8-213ENST00000436675 CWC25Q9NXE8 425 aaPredicted RBP19.18■□□□□ 0.66
HDAC8-213ENST00000436675 GPR25O00155 361 aa19.17■□□□□ 0.66
HDAC8-213ENST00000436675 CCDC191Q8NCU4 936 aa19.17■□□□□ 0.66
HDAC8-213ENST00000436675 SASH1O94885 1247 aa19.16■□□□□ 0.66
HDAC8-213ENST00000436675 TM4SF4P48230 202 aa19.16■□□□□ 0.66
HDAC8-213ENST00000436675 R3HDMLQ9H3Y0 253 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms