RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 EYA3Q99504 573 aa15.13■□□□□ 0.01
LINC00271-202ENST00000436554 ISCA1Q9BUE6 129 aa15.13■□□□□ 0.01
LINC00271-202ENST00000436554 ZC3H12CQ9C0D7 883 aaKnown RBP15.13■□□□□ 0.01
LINC00271-202ENST00000436554 TMPOP42166 694 aaKnown RBP15.12■□□□□ 0.01
LINC00271-202ENST00000436554 CDCA5Q96FF9 252 aa15.12■□□□□ 0.01
LINC00271-202ENST00000436554 GGA3Q9NZ52 723 aa15.12■□□□□ 0.01
LINC00271-202ENST00000436554 CHPF2Q9P2E5 772 aa15.12■□□□□ 0.01
LINC00271-202ENST00000436554 TAF1P21675 1872 aa15.12■□□□□ 0.01
LINC00271-202ENST00000436554 DUOX1Q9NRD9 1551 aa15.11■□□□□ 0.01
LINC00271-202ENST00000436554 SCARF1Q14162 830 aa15.11■□□□□ 0.01
LINC00271-202ENST00000436554 CTU1Q7Z7A3 348 aaKnown RBP15.11■□□□□ 0.01
LINC00271-202ENST00000436554 LAS1LQ9Y4W2 734 aaKnown RBP15.11■□□□□ 0.01
LINC00271-202ENST00000436554 POLR2AP24928 1970 aaKnown RBP15.11■□□□□ 0.01
LINC00271-202ENST00000436554 G3V3G9 751 aa15.1■□□□□ 0.01
LINC00271-202ENST00000436554 CHL1O00533 1208 aa15.1■□□□□ 0.01
LINC00271-202ENST00000436554 IRS4O14654 1257 aaPredicted RBP15.1■□□□□ 0.01
LINC00271-202ENST00000436554 NEUROD2Q15784 382 aa15.1■□□□□ 0.01
LINC00271-202ENST00000436554 DCAF8Q5TAQ9 597 aa15.1■□□□□ 0.01
LINC00271-202ENST00000436554 ANKRD36CQ5JPF3 1778 aa15.1■□□□□ 0.01
LINC00271-202ENST00000436554 LAMB2P55268 1798 aa15.09■□□□□ 0.01
LINC00271-202ENST00000436554 ZNF280AP59817 542 aaPredicted RBP15.09■□□□□ 0.01
LINC00271-202ENST00000436554 LMOD3Q0VAK6 560 aa15.09■□□□□ 0.01
LINC00271-202ENST00000436554 ANGEL2Q5VTE6 544 aaKnown RBP15.09■□□□□ 0.01
LINC00271-202ENST00000436554 RASAL3Q86YV0 1011 aa15.09■□□□□ 0.01
LINC00271-202ENST00000436554 REM2Q8IYK8 340 aaPredicted RBP15.09■□□□□ 0.01
LINC00271-202ENST00000436554 PDE4DIPQ5VU43 2346 aa15.09■□□□□ 0.01
LINC00271-202ENST00000436554 UFL1O94874 794 aa15.08■□□□□ 0
LINC00271-202ENST00000436554 TRIM28Q13263 835 aaKnown RBP15.08■□□□□ 0
LINC00271-202ENST00000436554 HDGFL1Q5TGJ6 251 aa15.08■□□□□ 0
LINC00271-202ENST00000436554 SEC31BQ9NQW1 1179 aa15.08■□□□□ 0
LINC00271-202ENST00000436554 PODXL2Q9NZ53 605 aa15.08■□□□□ 0
LINC00271-202ENST00000436554 ANKIB1Q9P2G1 1089 aa15.08■□□□□ 0
LINC00271-202ENST00000436554 SCAF8Q9UPN6 1271 aaKnown RBP15.08■□□□□ 0
LINC00271-202ENST00000436554 RSBN1LQ6PCB5 846 aaPredicted RBP15.07■□□□□ 0
LINC00271-202ENST00000436554 MOB2Q70IA6 237 aa15.07■□□□□ 0
LINC00271-202ENST00000436554 AGBL3Q8NEM8 1001 aa15.07■□□□□ 0
LINC00271-202ENST00000436554 DBF4Q9UBU7 674 aaPredicted RBP15.07■□□□□ 0
LINC00271-202ENST00000436554 GGA1Q9UJY5 639 aa15.07■□□□□ 0
LINC00271-202ENST00000436554 HPS5Q9UPZ3 1129 aa15.07■□□□□ 0
LINC00271-202ENST00000436554 UBE2Q2LH0YL09 131 aa15.06■□□□□ 0
LINC00271-202ENST00000436554 TBC1D8O95759 1140 aa15.06■□□□□ 0
LINC00271-202ENST00000436554 FKBP1BP68106 108 aa15.06■□□□□ 0
LINC00271-202ENST00000436554 PRPF38BQ5VTL8 546 aaKnown RBP15.06■□□□□ 0
LINC00271-202ENST00000436554 PRAMEF18Q5VWM3 479 aa15.06■□□□□ 0
LINC00271-202ENST00000436554 CCDC146Q8IYE0 955 aa15.06■□□□□ 0
LINC00271-202ENST00000436554 HDAC9Q9UKV0 1011 aa15.06■□□□□ 0
LINC00271-202ENST00000436554 USP17L8P0C7I0 530 aa15.05■□□□□ -0
LINC00271-202ENST00000436554 PKN2Q16513 984 aaKnown RBP15.05■□□□□ -0
LINC00271-202ENST00000436554 ZBTB38Q8NAP3 1195 aaPredicted RBP15.05■□□□□ -0
LINC00271-202ENST00000436554 ZNF296Q8WUU4 475 aaPredicted RBP15.05■□□□□ -0
LINC00271-202ENST00000436554 GMLQ99445 158 aa15.05■□□□□ -0
LINC00271-202ENST00000436554 MYOZ2Q9NPC6 264 aa15.05■□□□□ -0
LINC00271-202ENST00000436554 HYPKQ9NX55 129 aa15.05■□□□□ -0
LINC00271-202ENST00000436554 TRIM35Q9UPQ4 493 aa15.05■□□□□ -0
LINC00271-202ENST00000436554 COL4A1P02462 1669 aa15.04■□□□□ -0
LINC00271-202ENST00000436554 RIC3Q7Z5B4 369 aa15.04■□□□□ -0
LINC00271-202ENST00000436554 JARID2Q92833 1246 aaPredicted RBP15.04■□□□□ -0
LINC00271-202ENST00000436554 CCDC85AQ96PX6 553 aaPredicted RBP15.04■□□□□ -0
LINC00271-202ENST00000436554 HOXB7P09629 217 aa15.03■□□□□ -0
LINC00271-202ENST00000436554 DUSP27Q5VZP5 1158 aa15.03■□□□□ -0
LINC00271-202ENST00000436554 LRRC37AA6NMS7 1700 aa15.03■□□□□ -0
LINC00271-202ENST00000436554 PITPNM2Q9BZ72 1349 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 USP17L3A6NCW0 530 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 USP17L4A6NCW7 530 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 WTIPA6NIX2 430 aaPredicted RBP15.02■□□□□ -0
LINC00271-202ENST00000436554 HSP90B1P14625 803 aaKnown RBP15.02■□□□□ -0
LINC00271-202ENST00000436554 TM4SF4P48230 202 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 TTLL12Q14166 644 aaPredicted RBP15.02■□□□□ -0
LINC00271-202ENST00000436554 NBPF9Q3BBW0 867 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 CCDC152Q4G0S7 254 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 USP17L1Q7RTZ2 530 aa15.02■□□□□ -0
LINC00271-202ENST00000436554 AKAP11Q9UKA4 1901 aa15.02□□□□□ -0.01
LINC00271-202ENST00000436554 DDX60Q8IY21 1712 aaKnown RBP15.01□□□□□ -0.01
LINC00271-202ENST00000436554 GPR25O00155 361 aa15.01□□□□□ -0.01
LINC00271-202ENST00000436554 MKRN3Q13064 507 aaKnown RBP15.01□□□□□ -0.01
LINC00271-202ENST00000436554 PODNQ7Z5L7 613 aa15.01□□□□□ -0.01
LINC00271-202ENST00000436554 MYD88Q99836 296 aa15.01□□□□□ -0.01
LINC00271-202ENST00000436554 PHAXQ9H814 394 aaKnown RBP15.01□□□□□ -0.01
LINC00271-202ENST00000436554 SCN9AQ15858 1988 aa15□□□□□ -0.01
LINC00271-202ENST00000436554 PDE8AO60658 829 aa15□□□□□ -0.01
LINC00271-202ENST00000436554 ATP2B4P23634 1241 aa15□□□□□ -0.01
LINC00271-202ENST00000436554 ANKRD18AQ8IVF6 992 aa15□□□□□ -0.01
LINC00271-202ENST00000436554 MXD3Q9BW11 206 aa15□□□□□ -0.01
LINC00271-202ENST00000436554 XDHP47989 1333 aa14.99□□□□□ -0.01
LINC00271-202ENST00000436554 PCCAP05165 728 aaPredicted RBP14.99□□□□□ -0.01
LINC00271-202ENST00000436554 GOLGA2Q08379 1002 aa14.99□□□□□ -0.01
LINC00271-202ENST00000436554 RALBP1Q15311 655 aa14.99□□□□□ -0.01
LINC00271-202ENST00000436554 CCDC191Q8NCU4 936 aa14.99□□□□□ -0.01
LINC00271-202ENST00000436554 RUNDC1Q96C34 613 aa14.99□□□□□ -0.01
LINC00271-202ENST00000436554 R3HDMLQ9H3Y0 253 aa14.99□□□□□ -0.01
LINC00271-202ENST00000436554 ELL2O00472 640 aaPredicted RBP14.98□□□□□ -0.01
LINC00271-202ENST00000436554 PTPN12Q05209 780 aaKnown RBP14.98□□□□□ -0.01
LINC00271-202ENST00000436554 FBXO46Q6PJ61 603 aaPredicted RBP14.98□□□□□ -0.01
LINC00271-202ENST00000436554 MBIPQ9NS73 344 aa14.98□□□□□ -0.01
LINC00271-202ENST00000436554 ZNF609O15014 1411 aa14.98□□□□□ -0.01
LINC00271-202ENST00000436554 WNT10BO00744 389 aa14.97□□□□□ -0.01
LINC00271-202ENST00000436554 FKTNO75072 461 aa14.97□□□□□ -0.01
LINC00271-202ENST00000436554 NF2P35240 595 aa14.97□□□□□ -0.01
LINC00271-202ENST00000436554 PRKG1Q13976 671 aa14.97□□□□□ -0.01
LINC00271-202ENST00000436554 NOM1Q5C9Z4 860 aaKnown RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms