RNA–Protein interactions for RNA: ENST00000435290.1

CX3CR1-204, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

TSL 4

Gene CX3CR1, Length 699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-204ENST00000435290 POLLQ9UGP5 575 aa16.73■□□□□ 0.27
CX3CR1-204ENST00000435290 MYH3P11055 1940 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 PAPPA2Q9BXP8 1791 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 ATP5J2-PTCD1G3V325 749 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 LMOD3Q0VAK6 560 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 SULF1Q8IWU6 871 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 PCDH10Q9P2E7 1040 aa16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 LAS1LQ9Y4W2 734 aaKnown RBP16.72■□□□□ 0.27
CX3CR1-204ENST00000435290 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
CX3CR1-204ENST00000435290 G3V3G9 751 aa16.71■□□□□ 0.27
CX3CR1-204ENST00000435290 SLC10A3P09131 477 aa16.71■□□□□ 0.27
CX3CR1-204ENST00000435290 TMPOP42166 694 aaKnown RBP16.71■□□□□ 0.27
CX3CR1-204ENST00000435290 NEUROD2Q15784 382 aa16.71■□□□□ 0.27
CX3CR1-204ENST00000435290 DCAF8Q5TAQ9 597 aa16.71■□□□□ 0.27
CX3CR1-204ENST00000435290 SF3B3Q15393 1217 aaKnown RBP16.7■□□□□ 0.26
CX3CR1-204ENST00000435290 PLBD2Q8NHP8 589 aa16.7■□□□□ 0.26
CX3CR1-204ENST00000435290 CDCA5Q96FF9 252 aa16.7■□□□□ 0.26
CX3CR1-204ENST00000435290 HDGFL1Q5TGJ6 251 aa16.69■□□□□ 0.26
CX3CR1-204ENST00000435290 ANKRD13DQ6ZTN6 518 aa16.69■□□□□ 0.26
CX3CR1-204ENST00000435290 TBC1D16Q8TBP0 767 aa16.69■□□□□ 0.26
CX3CR1-204ENST00000435290 CSRNP1Q96S65 589 aa16.69■□□□□ 0.26
CX3CR1-204ENST00000435290 ISCA1Q9BUE6 129 aa16.69■□□□□ 0.26
CX3CR1-204ENST00000435290 ZC3H12CQ9C0D7 883 aaKnown RBP16.69■□□□□ 0.26
CX3CR1-204ENST00000435290 ZNF646O15015 1829 aaPredicted RBP16.68■□□□□ 0.26
CX3CR1-204ENST00000435290 IRS4O14654 1257 aaPredicted RBP16.68■□□□□ 0.26
CX3CR1-204ENST00000435290 UFL1O94874 794 aa16.68■□□□□ 0.26
CX3CR1-204ENST00000435290 RASAL3Q86YV0 1011 aa16.68■□□□□ 0.26
CX3CR1-204ENST00000435290 VIL1P09327 827 aaKnown RBP16.67■□□□□ 0.26
CX3CR1-204ENST00000435290 RPS8P62241 208 aaKnown RBP16.67■□□□□ 0.26
CX3CR1-204ENST00000435290 ANGEL2Q5VTE6 544 aaKnown RBP16.67■□□□□ 0.26
CX3CR1-204ENST00000435290 CTU1Q7Z7A3 348 aaKnown RBP16.67■□□□□ 0.26
CX3CR1-204ENST00000435290 CCDC146Q8IYE0 955 aa16.67■□□□□ 0.26
CX3CR1-204ENST00000435290 ANKIB1Q9P2G1 1089 aa16.67■□□□□ 0.26
CX3CR1-204ENST00000435290 SEC31BQ9NQW1 1179 aa16.66■□□□□ 0.26
CX3CR1-204ENST00000435290 SCARF1Q14162 830 aa16.65■□□□□ 0.26
CX3CR1-204ENST00000435290 DBF4Q9UBU7 674 aaPredicted RBP16.65■□□□□ 0.26
CX3CR1-204ENST00000435290 GGA1Q9UJY5 639 aa16.65■□□□□ 0.26
CX3CR1-204ENST00000435290 SCAF8Q9UPN6 1271 aaKnown RBP16.65■□□□□ 0.26
CX3CR1-204ENST00000435290 CHL1O00533 1208 aa16.64■□□□□ 0.25
CX3CR1-204ENST00000435290 RSBN1LQ6PCB5 846 aaPredicted RBP16.64■□□□□ 0.25
CX3CR1-204ENST00000435290 HDAC9Q9UKV0 1011 aa16.64■□□□□ 0.25
CX3CR1-204ENST00000435290 MOB2Q70IA6 237 aa16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 RIC3Q7Z5B4 369 aa16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 REM2Q8IYK8 340 aaPredicted RBP16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 AGBL3Q8NEM8 1001 aa16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 CCDC85AQ96PX6 553 aaPredicted RBP16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 HYPKQ9NX55 129 aa16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 PODXL2Q9NZ53 605 aa16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 HPS5Q9UPZ3 1129 aa16.63■□□□□ 0.25
CX3CR1-204ENST00000435290 ZNF609O15014 1411 aa16.62■□□□□ 0.25
CX3CR1-204ENST00000435290 ZNF280AP59817 542 aaPredicted RBP16.62■□□□□ 0.25
CX3CR1-204ENST00000435290 PRPF38BQ5VTL8 546 aaKnown RBP16.62■□□□□ 0.25
CX3CR1-204ENST00000435290 MYOZ2Q9NPC6 264 aa16.62■□□□□ 0.25
CX3CR1-204ENST00000435290 ECM29Q5VYK3 1845 aa16.61■□□□□ 0.25
CX3CR1-204ENST00000435290 TBC1D8O95759 1140 aa16.61■□□□□ 0.25
CX3CR1-204ENST00000435290 HOXB7P09629 217 aa16.61■□□□□ 0.25
CX3CR1-204ENST00000435290 TTLL12Q14166 644 aaPredicted RBP16.61■□□□□ 0.25
CX3CR1-204ENST00000435290 ZBTB38Q8NAP3 1195 aaPredicted RBP16.61■□□□□ 0.25
CX3CR1-204ENST00000435290 TRIM35Q9UPQ4 493 aa16.61■□□□□ 0.25
CX3CR1-204ENST00000435290 UBE2Q2LH0YL09 131 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 USP17L8P0C7I0 530 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 FKBP1BP68106 108 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 MKRN3Q13064 507 aaKnown RBP16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 CCDC152Q4G0S7 254 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 PRAMEF18Q5VWM3 479 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 DUSP27Q5VZP5 1158 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 ZNF296Q8WUU4 475 aaPredicted RBP16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 JARID2Q92833 1246 aaPredicted RBP16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 MYD88Q99836 296 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 PITPNM2Q9BZ72 1349 aa16.6■□□□□ 0.25
CX3CR1-204ENST00000435290 HSP90B1P14625 803 aaKnown RBP16.59■□□□□ 0.25
CX3CR1-204ENST00000435290 TRIM28Q13263 835 aaKnown RBP16.59■□□□□ 0.25
CX3CR1-204ENST00000435290 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
CX3CR1-204ENST00000435290 PHAXQ9H814 394 aaKnown RBP16.59■□□□□ 0.25
CX3CR1-204ENST00000435290 XDHP47989 1333 aa16.59■□□□□ 0.25
CX3CR1-204ENST00000435290 USP17L3A6NCW0 530 aa16.58■□□□□ 0.24
CX3CR1-204ENST00000435290 USP17L4A6NCW7 530 aa16.58■□□□□ 0.24
CX3CR1-204ENST00000435290 PDE8AO60658 829 aa16.58■□□□□ 0.24
CX3CR1-204ENST00000435290 PKN2Q16513 984 aaKnown RBP16.58■□□□□ 0.24
CX3CR1-204ENST00000435290 USP17L1Q7RTZ2 530 aa16.58■□□□□ 0.24
CX3CR1-204ENST00000435290 ANKRD18AQ8IVF6 992 aa16.58■□□□□ 0.24
CX3CR1-204ENST00000435290 RALBP1Q15311 655 aa16.57■□□□□ 0.24
CX3CR1-204ENST00000435290 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
CX3CR1-204ENST00000435290 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
CX3CR1-204ENST00000435290 GMLQ99445 158 aa16.57■□□□□ 0.24
CX3CR1-204ENST00000435290 LAMB1P07942 1786 aa16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 PCCAP05165 728 aaPredicted RBP16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 ATP2B4P23634 1241 aa16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 WDR43Q15061 677 aaKnown RBP eCLIP16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 PODNQ7Z5L7 613 aa16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 MXD3Q9BW11 206 aa16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 MBIPQ9NS73 344 aa16.56■□□□□ 0.24
CX3CR1-204ENST00000435290 GPR25O00155 361 aa16.55■□□□□ 0.24
CX3CR1-204ENST00000435290 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
CX3CR1-204ENST00000435290 NF2P35240 595 aa16.55■□□□□ 0.24
CX3CR1-204ENST00000435290 PRKG1Q13976 671 aa16.55■□□□□ 0.24
CX3CR1-204ENST00000435290 CCDC191Q8NCU4 936 aa16.55■□□□□ 0.24
CX3CR1-204ENST00000435290 CWC25Q9NXE8 425 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms