RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 RTL9Q8NET4 1388 aa28.19■■■□□ 2.1
SEMA3B-205ENST00000434030 SCN9AQ15858 1988 aa28.19■■■□□ 2.1
SEMA3B-205ENST00000434030 UFL1O94874 794 aa28.17■■■□□ 2.1
SEMA3B-205ENST00000434030 GMPSP49915 693 aaPredicted RBP28.17■■■□□ 2.1
SEMA3B-205ENST00000434030 SLFN5Q08AF3 891 aa28.17■■■□□ 2.1
SEMA3B-205ENST00000434030 MAP1SQ66K74 1059 aaPredicted RBP28.17■■■□□ 2.1
SEMA3B-205ENST00000434030 USP50Q70EL3 339 aaPredicted RBP28.17■■■□□ 2.1
SEMA3B-205ENST00000434030 GGA1Q9UJY5 639 aa28.17■■■□□ 2.1
SEMA3B-205ENST00000434030 DOK7Q18PE1 504 aa28.16■■■□□ 2.1
SEMA3B-205ENST00000434030 CNTROBQ8N137 903 aa28.16■■■□□ 2.1
SEMA3B-205ENST00000434030 ZC3H12CQ9C0D7 883 aaKnown RBP28.16■■■□□ 2.1
SEMA3B-205ENST00000434030 BSDC1Q9NW68 430 aaPredicted RBP28.16■■■□□ 2.1
SEMA3B-205ENST00000434030 ECE2O60344 883 aa28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 CSF1RP07333 972 aa28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 BCL2L13Q9BXK5 485 aa28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 CREBZFQ9NS37 354 aa28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 ADARB2Q9NS39 739 aaKnown RBP28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 PSME4Q14997 1843 aa28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 XDHP47989 1333 aa28.15■■■□□ 2.1
SEMA3B-205ENST00000434030 JMYQ8N9B5 988 aa28.14■■■□□ 2.1
SEMA3B-205ENST00000434030 TRPM7Q96QT4 1865 aa28.13■■■□□ 2.09
SEMA3B-205ENST00000434030 PSMD14O00487 310 aa28.13■■■□□ 2.09
SEMA3B-205ENST00000434030 CDCA7LQ96GN5 454 aa28.13■■■□□ 2.09
SEMA3B-205ENST00000434030 KCNQ5Q9NR82 932 aa28.13■■■□□ 2.09
SEMA3B-205ENST00000434030 MINPP1Q9UNW1 487 aa28.13■■■□□ 2.09
SEMA3B-205ENST00000434030 ITGA6P23229 1130 aa28.12■■■□□ 2.09
SEMA3B-205ENST00000434030 ATP2B4P23634 1241 aa28.12■■■□□ 2.09
SEMA3B-205ENST00000434030 MRPL50Q8N5N7 158 aaKnown RBP28.12■■■□□ 2.09
SEMA3B-205ENST00000434030 FAM161AQ3B820 660 aa28.11■■■□□ 2.09
SEMA3B-205ENST00000434030 SLC4A10Q6U841 1118 aa28.11■■■□□ 2.09
SEMA3B-205ENST00000434030 CNOT7Q9UIV1 285 aaKnown RBP28.11■■■□□ 2.09
SEMA3B-205ENST00000434030 ZBTB12Q9Y330 459 aaPredicted RBP28.11■■■□□ 2.09
SEMA3B-205ENST00000434030 POLR2AP24928 1970 aaKnown RBP28.11■■■□□ 2.09
SEMA3B-205ENST00000434030 IGHMBP2P38935 993 aaKnown RBP28.1■■■□□ 2.09
SEMA3B-205ENST00000434030 FOXO4P98177 505 aa28.1■■■□□ 2.09
SEMA3B-205ENST00000434030 WTIPA6NIX2 430 aaPredicted RBP28.09■■■□□ 2.09
SEMA3B-205ENST00000434030 G3V3G9 751 aa28.09■■■□□ 2.09
SEMA3B-205ENST00000434030 ALDH1L1O75891 902 aa28.09■■■□□ 2.09
SEMA3B-205ENST00000434030 DCAF8Q5TAQ9 597 aa28.09■■■□□ 2.09
SEMA3B-205ENST00000434030 TRMT2AQ8IZ69 625 aaKnown RBP28.09■■■□□ 2.09
SEMA3B-205ENST00000434030 DPF2Q92785 391 aa28.09■■■□□ 2.09
SEMA3B-205ENST00000434030 SHTN1A0MZ66 631 aa28.08■■■□□ 2.09
SEMA3B-205ENST00000434030 TMEM88BA6NKF7 163 aa28.08■■■□□ 2.09
SEMA3B-205ENST00000434030 GRM8O00222 908 aa28.08■■■□□ 2.09
SEMA3B-205ENST00000434030 SRCIN1Q9C0H9 1055 aa28.08■■■□□ 2.09
SEMA3B-205ENST00000434030 MICALL2Q8IY33 904 aa28.07■■■□□ 2.08
SEMA3B-205ENST00000434030 SSH1Q8WYL5 1049 aa28.07■■■□□ 2.08
SEMA3B-205ENST00000434030 MPHOSPH8Q99549 860 aa28.07■■■□□ 2.08
SEMA3B-205ENST00000434030 A0A1B0GUL6 1792 aa28.06■■■□□ 2.08
SEMA3B-205ENST00000434030 H7C1D1 291 aa28.06■■■□□ 2.08
SEMA3B-205ENST00000434030 CCT4P50991 539 aaKnown RBP28.06■■■□□ 2.08
SEMA3B-205ENST00000434030 HIRAP54198 1017 aaPredicted RBP28.06■■■□□ 2.08
SEMA3B-205ENST00000434030 C9orf78Q9NZ63 289 aaPredicted RBP28.06■■■□□ 2.08
SEMA3B-205ENST00000434030 ANKRD18BA2A2Z9 1011 aa28.05■■■□□ 2.08
SEMA3B-205ENST00000434030 VIL1P09327 827 aaKnown RBP28.05■■■□□ 2.08
SEMA3B-205ENST00000434030 PGAP2Q9UHJ9 254 aa28.05■■■□□ 2.08
SEMA3B-205ENST00000434030 RPS12P25398 132 aaKnown RBP28.04■■■□□ 2.08
SEMA3B-205ENST00000434030 EPHA10Q5JZY3 1008 aa28.04■■■□□ 2.08
SEMA3B-205ENST00000434030 TRPM4Q8TD43 1214 aa28.04■■■□□ 2.08
SEMA3B-205ENST00000434030 MKRN1Q9UHC7 482 aaKnown RBP28.04■■■□□ 2.08
SEMA3B-205ENST00000434030 MED23Q9ULK4 1368 aa28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 PTPRCP08575 1304 aa28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 FMR1Q06787 632 aaKnown RBP eCLIP28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 IFIT5Q13325 482 aaKnown RBP28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 LMBR1LQ6UX01 489 aa28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 LEMD3Q9Y2U8 911 aa28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 CHMP3Q9Y3E7 222 aa28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 PCNTO95613 3336 aa28.03■■■□□ 2.08
SEMA3B-205ENST00000434030 ALDH1L2Q3SY69 923 aa28.02■■■□□ 2.08
SEMA3B-205ENST00000434030 ZC3H15Q8WU90 426 aaKnown RBP28.02■■■□□ 2.08
SEMA3B-205ENST00000434030 ANKRD2Q9GZV1 360 aa28.02■■■□□ 2.08
SEMA3B-205ENST00000434030 ZNF646O15015 1829 aaPredicted RBP28.02■■■□□ 2.08
SEMA3B-205ENST00000434030 SAMD7Q7Z3H4 446 aa28.01■■■□□ 2.07
SEMA3B-205ENST00000434030 PODNQ7Z5L7 613 aa28.01■■■□□ 2.07
SEMA3B-205ENST00000434030 CNTNAP1P78357 1384 aa28■■■□□ 2.07
SEMA3B-205ENST00000434030 TRAF5O00463 557 aa28■■■□□ 2.07
SEMA3B-205ENST00000434030 CHRNDQ07001 517 aa28■■■□□ 2.07
SEMA3B-205ENST00000434030 ZNF804BA4D1E1 1349 aa27.99■■■□□ 2.07
SEMA3B-205ENST00000434030 NBPF7P0C2Y1 421 aaPredicted RBP27.99■■■□□ 2.07
SEMA3B-205ENST00000434030 TXNRD3Q86VQ6 643 aa27.99■■■□□ 2.07
SEMA3B-205ENST00000434030 UTYO14607 1347 aa27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 EGFRP00533 1210 aa27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 CCDC57Q2TAC2 916 aa27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 TBC1D10BQ4KMP7 808 aaPredicted RBP27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 DIEXFQ68CQ4 756 aaKnown RBP27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 RSBN1LQ6PCB5 846 aaPredicted RBP27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 MIER1Q8N108 512 aa27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 KAZALD1Q96I82 304 aa27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 SUCLG2Q96I99 432 aa27.98■■■□□ 2.07
SEMA3B-205ENST00000434030 CST9Q5W186 159 aa27.97■■■□□ 2.07
SEMA3B-205ENST00000434030 AGBL3Q8NEM8 1001 aa27.97■■■□□ 2.07
SEMA3B-205ENST00000434030 GLIS2Q9BZE0 524 aaPredicted RBP27.97■■■□□ 2.07
SEMA3B-205ENST00000434030 ZNF609O15014 1411 aa27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 USP17L3A6NCW0 530 aa27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 USP17L4A6NCW7 530 aa27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 CT47B1P0C2W7 299 aaPredicted RBP27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 RBM26Q5T8P6 1007 aaKnown RBP27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 USP17L1Q7RTZ2 530 aa27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 ZNF594Q96JF6 807 aaPredicted RBP27.96■■■□□ 2.07
SEMA3B-205ENST00000434030 COA1Q9GZY4 146 aa27.96■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms