RNA–Protein interactions for RNA: ENST00000433555.1

RPUSD3-207, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 807 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-207ENST00000433555 PODXL2Q9NZ53 605 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 SCN4AP35499 1836 aa23.84■■□□□ 1.41
RPUSD3-207ENST00000433555 ANKRD18BA2A2Z9 1011 aa23.83■■□□□ 1.41
RPUSD3-207ENST00000433555 DDNO94850 711 aaPredicted RBP23.83■■□□□ 1.41
RPUSD3-207ENST00000433555 MEIS3Q99687 375 aa23.83■■□□□ 1.41
RPUSD3-207ENST00000433555 MINPP1Q9UNW1 487 aa23.83■■□□□ 1.41
RPUSD3-207ENST00000433555 UFL1O94874 794 aa23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 IGHMBP2P38935 993 aaKnown RBP23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 IFIT5Q13325 482 aaKnown RBP23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 ZKSCAN2Q63HK3 967 aa23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 NIM1KQ8IY84 436 aa23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 YTHDC1Q96MU7 727 aaKnown RBP23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 XDHP47989 1333 aa23.82■■□□□ 1.4
RPUSD3-207ENST00000433555 IPO8O15397 1037 aaKnown RBP23.81■■□□□ 1.4
RPUSD3-207ENST00000433555 JDP2Q8WYK2 163 aa23.81■■□□□ 1.4
RPUSD3-207ENST00000433555 ANKIB1Q9P2G1 1089 aa23.81■■□□□ 1.4
RPUSD3-207ENST00000433555 POTECB2RU33 542 aa23.8■■□□□ 1.4
RPUSD3-207ENST00000433555 C6orf229H3BNL8 230 aa23.8■■□□□ 1.4
RPUSD3-207ENST00000433555 TMEM57Q8N5G2 664 aa23.8■■□□□ 1.4
RPUSD3-207ENST00000433555 VPS33BQ9H267 617 aa23.8■■□□□ 1.4
RPUSD3-207ENST00000433555 RRAGCQ9HB90 399 aa23.8■■□□□ 1.4
RPUSD3-207ENST00000433555 YDJCA8MPS7 323 aa23.79■■□□□ 1.4
RPUSD3-207ENST00000433555 RIMBP2O15034 1052 aa23.79■■□□□ 1.4
RPUSD3-207ENST00000433555 RLBP1P12271 317 aa23.79■■□□□ 1.4
RPUSD3-207ENST00000433555 GGA1Q9UJY5 639 aa23.79■■□□□ 1.4
RPUSD3-207ENST00000433555 UBTFL1P0CB47 393 aaPredicted RBP23.78■■□□□ 1.4
RPUSD3-207ENST00000433555 CCDC57Q2TAC2 916 aa23.78■■□□□ 1.4
RPUSD3-207ENST00000433555 MPHOSPH8Q99549 860 aa23.78■■□□□ 1.4
RPUSD3-207ENST00000433555 LRRFIP2Q9Y608 721 aaKnown RBP23.78■■□□□ 1.4
RPUSD3-207ENST00000433555 ADAMTSL1Q8N6G6 1762 aa23.78■■□□□ 1.4
RPUSD3-207ENST00000433555 CHRNDQ07001 517 aa23.77■■□□□ 1.4
RPUSD3-207ENST00000433555 WASHC4Q2M389 1173 aa23.77■■□□□ 1.4
RPUSD3-207ENST00000433555 DBNDD1Q9H9R9 158 aa23.77■■□□□ 1.4
RPUSD3-207ENST00000433555 KLRK1P26718 216 aa23.76■■□□□ 1.39
RPUSD3-207ENST00000433555 DPY19L2Q6NUT2 758 aa23.76■■□□□ 1.39
RPUSD3-207ENST00000433555 PUS3Q9BZE2 481 aaKnown RBP23.76■■□□□ 1.39
RPUSD3-207ENST00000433555 ZNRF3Q9ULT6 936 aa23.76■■□□□ 1.39
RPUSD3-207ENST00000433555 MED23Q9ULK4 1368 aa23.76■■□□□ 1.39
RPUSD3-207ENST00000433555 SNAP23O00161 211 aa23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 ATP2B4P23634 1241 aa23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 EIF6P56537 245 aaKnown RBP23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 DOK7Q18PE1 504 aa23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 KLHDC4Q8TBB5 520 aa23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 L3MBTL3Q96JM7 780 aaPredicted RBP23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 EYA3Q99504 573 aa23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 RCAN3Q9UKA8 241 aa23.75■■□□□ 1.39
RPUSD3-207ENST00000433555 RFX5P48382 616 aaPredicted RBP23.74■■□□□ 1.39
RPUSD3-207ENST00000433555 CXCL9Q07325 125 aa23.74■■□□□ 1.39
RPUSD3-207ENST00000433555 TAF7LQ5H9L4 462 aa23.74■■□□□ 1.39
RPUSD3-207ENST00000433555 HELBQ8NG08 1087 aaPredicted RBP23.74■■□□□ 1.39
RPUSD3-207ENST00000433555 GJA3Q9Y6H8 435 aa23.74■■□□□ 1.39
RPUSD3-207ENST00000433555 IRS2Q9Y4H2 1338 aa23.74■■□□□ 1.39
RPUSD3-207ENST00000433555 ECE2O60344 883 aa23.73■■□□□ 1.39
RPUSD3-207ENST00000433555 TAF5LO75529 589 aa23.73■■□□□ 1.39
RPUSD3-207ENST00000433555 DZIP1LQ8IYY4 767 aaKnown RBP23.73■■□□□ 1.39
RPUSD3-207ENST00000433555 GPC2Q8N158 579 aa23.73■■□□□ 1.39
RPUSD3-207ENST00000433555 RAD17O75943 681 aa23.72■■□□□ 1.39
RPUSD3-207ENST00000433555 LDHAL6AQ6ZMR3 332 aa23.72■■□□□ 1.39
RPUSD3-207ENST00000433555 TXNRD3Q86VQ6 643 aa23.72■■□□□ 1.39
RPUSD3-207ENST00000433555 PANK1Q8TE04 598 aa23.72■■□□□ 1.39
RPUSD3-207ENST00000433555 KCNQ5Q9NR82 932 aa23.72■■□□□ 1.39
RPUSD3-207ENST00000433555 ZNF804BA4D1E1 1349 aa23.71■■□□□ 1.39
RPUSD3-207ENST00000433555 SCNN1DP51172 638 aa23.71■■□□□ 1.39
RPUSD3-207ENST00000433555 LRRC24Q50LG9 513 aa23.71■■□□□ 1.39
RPUSD3-207ENST00000433555 FTSJ3Q8IY81 847 aaKnown RBP23.71■■□□□ 1.39
RPUSD3-207ENST00000433555 ANKRD2Q9GZV1 360 aa23.71■■□□□ 1.39
RPUSD3-207ENST00000433555 CNNM1Q9NRU3 951 aa23.71■■□□□ 1.39
RPUSD3-207ENST00000433555 PLIN1O60240 522 aa23.7■■□□□ 1.38
RPUSD3-207ENST00000433555 VEGFAP15692 232 aaPredicted RBP23.7■■□□□ 1.38
RPUSD3-207ENST00000433555 C1QTNF8P60827 252 aa23.7■■□□□ 1.38
RPUSD3-207ENST00000433555 ZC3H12CQ9C0D7 883 aaKnown RBP23.7■■□□□ 1.38
RPUSD3-207ENST00000433555 LEMD3Q9Y2U8 911 aa23.7■■□□□ 1.38
RPUSD3-207ENST00000433555 GNAI3P08754 354 aa23.69■■□□□ 1.38
RPUSD3-207ENST00000433555 POTEIP0CG38 1075 aa23.69■■□□□ 1.38
RPUSD3-207ENST00000433555 POTEJP0CG39 1038 aa23.69■■□□□ 1.38
RPUSD3-207ENST00000433555 CIAPIN1Q6FI81 312 aa23.69■■□□□ 1.38
RPUSD3-207ENST00000433555 RIPOR2Q9Y4F9 1068 aa23.69■■□□□ 1.38
RPUSD3-207ENST00000433555 ARAP2Q8WZ64 1704 aa23.69■■□□□ 1.38
RPUSD3-207ENST00000433555 PTPN12Q05209 780 aaKnown RBP23.68■■□□□ 1.38
RPUSD3-207ENST00000433555 ITPRIPQ8IWB1 547 aa23.68■■□□□ 1.38
RPUSD3-207ENST00000433555 PSMD14O00487 310 aa23.67■■□□□ 1.38
RPUSD3-207ENST00000433555 TOMM70O94826 608 aa23.67■■□□□ 1.38
RPUSD3-207ENST00000433555 TAF1DQ9H5J8 278 aaPredicted RBP23.67■■□□□ 1.38
RPUSD3-207ENST00000433555 SHTN1A0MZ66 631 aa23.66■■□□□ 1.38
RPUSD3-207ENST00000433555 KCNJ4P48050 445 aa23.66■■□□□ 1.38
RPUSD3-207ENST00000433555 GMPSP49915 693 aaPredicted RBP23.66■■□□□ 1.38
RPUSD3-207ENST00000433555 VGLL2Q8N8G2 317 aa23.66■■□□□ 1.38
RPUSD3-207ENST00000433555 C1orf115Q9H7X2 142 aa23.66■■□□□ 1.38
RPUSD3-207ENST00000433555 HACL1Q9UJ83 578 aa23.66■■□□□ 1.38
RPUSD3-207ENST00000433555 PA2G4Q9UQ80 394 aaKnown RBP23.65■■□□□ 1.38
RPUSD3-207ENST00000433555 MYH13Q9UKX3 1938 aa23.65■■□□□ 1.38
RPUSD3-207ENST00000433555 IQCA1LA6NCM1 817 aa23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 GNAI2P04899 355 aa23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 EPS15P42566 896 aa23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 MTX1Q13505 466 aa23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 C16orf71Q8IYS4 520 aaPredicted RBP23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 RBM46Q8TBY0 533 aaKnown RBP23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 ZBTB12Q9Y330 459 aaPredicted RBP23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 ZNF609O15014 1411 aa23.64■■□□□ 1.37
RPUSD3-207ENST00000433555 MROH5Q6ZUA9 1318 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms