RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 SURF6O75683 361 aaKnown RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CCDC172P0C7W6 258 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 SFPQP23246 707 aaKnown RBP eCLIP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CCDC57Q2TAC2 916 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CEP128Q6ZU80 1094 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 PLBD2Q8NHP8 589 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 UTYO14607 1347 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 ATP5JP18859 108 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 GBP1P32455 592 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 POLA2Q14181 598 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 TAF7LQ5H9L4 462 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 VPS36Q86VN1 386 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 TMEM87BQ96K49 555 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 NUCKS1Q9H1E3 243 aaKnown RBP4.38□□□□□ -1.71
SHPRH-205ENST00000433355 PHLPP2Q6ZVD8 1323 aa4.38□□□□□ -1.71
SHPRH-205ENST00000433355 CLSTN1O94985 981 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 CCDC184Q52MB2 194 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 SASS6Q6UVJ0 657 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 CARD10Q9BWT7 1032 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 SYNPO2Q9UMS6 1093 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 WDR17Q8IZU2 1322 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 SGSM2O43147 1006 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 VTI1AQ96AJ9 217 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 CCDC51Q96ER9 411 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 RIC1Q4ADV7 1423 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 CCDC88AQ3V6T2 1871 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 MAP9Q49MG5 647 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 PPP1R42Q7Z4L9 355 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 FLAD1Q8NFF5 587 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 GRPEL1Q9HAV7 217 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 TCHHQ07283 1943 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 IFIT1P09914 478 aaKnown RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 IL2RBP14784 551 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 IFIT5Q13325 482 aaKnown RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 RBM28Q9NW13 759 aaKnown RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 HMGB1P1B2RPK0 211 aaPredicted RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 TIGD1Q96MW7 591 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 TBC1D2Q9BYX2 928 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 ATRNO75882 1429 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 STX6O43752 255 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 FAM160A1Q05DH4 1040 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 PLEKHM2Q8IWE5 1019 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 HOMEZQ8IX15 550 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 METTL22Q9BUU2 404 aaPredicted RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 PAK3O75914 559 aaPredicted RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 TRIM37O94972 964 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 RHPN1Q8TCX5 695 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 ESYT1Q9BSJ8 1104 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 SIPA1L3O60292 1781 aaPredicted RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 CEP290O15078 2479 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 EIF3JO75822 258 aaKnown RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 PRPHP41219 470 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 USP5P45974 858 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 NOC3LQ8WTT2 800 aaKnown RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 FAM89AQ96GI7 184 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 EMILIN1Q9Y6C2 1016 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 HEG1Q9ULI3 1381 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 HOXC9P31274 260 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 IGHMBP2P38935 993 aaKnown RBP4.37□□□□□ -1.71
SHPRH-205ENST00000433355 HSP90B2PQ58FF3 399 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 FERMT2Q96AC1 680 aa4.37□□□□□ -1.71
SHPRH-205ENST00000433355 SLC5A1P13866 664 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 PDE4BQ07343 736 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 NUP62CLQ9H1M0 184 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 ZBTB7BO15156 539 aaPredicted RBP4.36□□□□□ -1.71
SHPRH-205ENST00000433355 FEZ1Q99689 392 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 TMOD3Q9NYL9 352 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 CRYBG1Q9Y4K1 1723 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 STK36Q9NRP7 1315 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 FSD2A1L4K1 749 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 SAFB2Q14151 953 aaKnown RBP eCLIP4.36□□□□□ -1.711e-6■□□□□ 10.6
SHPRH-205ENST00000433355 ANKRD13DQ6ZTN6 518 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 HOOK3Q86VS8 718 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 CDCA7LQ96GN5 454 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 LNPKQ9C0E8 428 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 MYO3BQ8WXR4 1341 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 HSP90AB2PQ58FF8 381 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 NOM1Q5C9Z4 860 aaKnown RBP4.36□□□□□ -1.71
SHPRH-205ENST00000433355 BPIFA3Q9BQP9 254 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 EHMT1Q9H9B1 1298 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 POLR3EQ9NVU0 708 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 YEATS4O95619 227 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 CC2D2BQ6DHV5 1058 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 PDRG1Q9NUG6 133 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 SF3A1Q15459 793 aaKnown RBP4.36□□□□□ -1.71
SHPRH-205ENST00000433355 SLFNL1Q499Z3 407 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 ESCO1Q5FWF5 840 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 RIC3Q7Z5B4 369 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 SPATA32Q96LK8 384 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 PALLDQ8WX93 1383 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 FILIP1LQ4L180 1135 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 NME9Q86XW9 330 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 RABGAP1Q9Y3P9 1069 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 BAG3O95817 575 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 LIFRP42702 1097 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 RCSD1Q6JBY9 416 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 FOXR2Q6PJQ5 311 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 SLC52A2Q9HAB3 445 aa4.36□□□□□ -1.71
SHPRH-205ENST00000433355 AMPD3Q01432 767 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms