RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 ZC3H4Q9UPT8 1303 aaKnown RBP23.3■■□□□ 1.32
DDR1-236ENST00000431373 PODXL2Q9NZ53 605 aa23.29■■□□□ 1.32
DDR1-236ENST00000431373 VPS33BQ9H267 617 aa23.28■■□□□ 1.32
DDR1-236ENST00000431373 ANKIB1Q9P2G1 1089 aa23.28■■□□□ 1.32
DDR1-236ENST00000431373 MINPP1Q9UNW1 487 aa23.28■■□□□ 1.32
DDR1-236ENST00000431373 ZNF594Q96JF6 807 aaPredicted RBP23.27■■□□□ 1.32
DDR1-236ENST00000431373 XDHP47989 1333 aa23.27■■□□□ 1.32
DDR1-236ENST00000431373 C6orf229H3BNL8 230 aa23.26■■□□□ 1.31
DDR1-236ENST00000431373 PPIP5K2O43314 1243 aa23.26■■□□□ 1.31
DDR1-236ENST00000431373 GNAI2P04899 355 aa23.26■■□□□ 1.31
DDR1-236ENST00000431373 LARGE2Q8N3Y3 721 aa23.26■■□□□ 1.31
DDR1-236ENST00000431373 GGA1Q9UJY5 639 aa23.26■■□□□ 1.31
DDR1-236ENST00000431373 AOC3Q16853 763 aa23.25■■□□□ 1.31
DDR1-236ENST00000431373 LDHAL6AQ6ZMR3 332 aa23.25■■□□□ 1.31
DDR1-236ENST00000431373 TBC1D16Q8TBP0 767 aa23.25■■□□□ 1.31
DDR1-236ENST00000431373 POLLQ9UGP5 575 aa23.25■■□□□ 1.31
DDR1-236ENST00000431373 COL4A5P29400 1685 aa23.25■■□□□ 1.31
DDR1-236ENST00000431373 ZBTB7BO15156 539 aaPredicted RBP23.24■■□□□ 1.31
DDR1-236ENST00000431373 UFL1O94874 794 aa23.24■■□□□ 1.31
DDR1-236ENST00000431373 PDE3AQ14432 1141 aa23.24■■□□□ 1.31
DDR1-236ENST00000431373 JDP2Q8WYK2 163 aa23.24■■□□□ 1.31
DDR1-236ENST00000431373 EYA3Q99504 573 aa23.24■■□□□ 1.31
DDR1-236ENST00000431373 ANKRD2Q9GZV1 360 aa23.24■■□□□ 1.31
DDR1-236ENST00000431373 CNNM1Q9NRU3 951 aa23.24■■□□□ 1.31
DDR1-236ENST00000431373 ATP2B4P23634 1241 aa23.23■■□□□ 1.31
DDR1-236ENST00000431373 CHRNDQ07001 517 aa23.23■■□□□ 1.31
DDR1-236ENST00000431373 KIAA2012Q0VF49 1180 aa23.23■■□□□ 1.31
DDR1-236ENST00000431373 MVPQ14764 893 aaKnown RBP23.23■■□□□ 1.31
DDR1-236ENST00000431373 ZNF784Q8NCA9 323 aaPredicted RBP23.23■■□□□ 1.31
DDR1-236ENST00000431373 WASHC4Q2M389 1173 aa23.22■■□□□ 1.31
DDR1-236ENST00000431373 COG6Q9Y2V7 657 aa23.22■■□□□ 1.31
DDR1-236ENST00000431373 RFX5P48382 616 aaPredicted RBP23.21■■□□□ 1.31
DDR1-236ENST00000431373 MTX1Q13505 466 aa23.21■■□□□ 1.31
DDR1-236ENST00000431373 NIM1KQ8IY84 436 aa23.21■■□□□ 1.31
DDR1-236ENST00000431373 PUS3Q9BZE2 481 aaKnown RBP23.21■■□□□ 1.31
DDR1-236ENST00000431373 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
DDR1-236ENST00000431373 KLHDC4Q8TBB5 520 aa23.2■■□□□ 1.3
DDR1-236ENST00000431373 ZNF526Q8TF50 670 aaPredicted RBP23.2■■□□□ 1.3
DDR1-236ENST00000431373 GPR101Q96P66 508 aaPredicted RBP23.2■■□□□ 1.3
DDR1-236ENST00000431373 DDX19BQ9UMR2 479 aa23.2■■□□□ 1.3
DDR1-236ENST00000431373 LEMD3Q9Y2U8 911 aa23.2■■□□□ 1.3
DDR1-236ENST00000431373 FZD9O00144 591 aa23.19■■□□□ 1.3
DDR1-236ENST00000431373 RIMBP2O15034 1052 aa23.19■■□□□ 1.3
DDR1-236ENST00000431373 RRP1P56182 461 aaKnown RBP23.19■■□□□ 1.3
DDR1-236ENST00000431373 PTPN12Q05209 780 aaKnown RBP23.19■■□□□ 1.3
DDR1-236ENST00000431373 DPY19L2Q6NUT2 758 aa23.19■■□□□ 1.3
DDR1-236ENST00000431373 ZC3H12CQ9C0D7 883 aaKnown RBP23.19■■□□□ 1.3
DDR1-236ENST00000431373 RIPOR2Q9Y4F9 1068 aa23.19■■□□□ 1.3
DDR1-236ENST00000431373 KDM2BQ8NHM5 1336 aa23.18■■□□□ 1.3
DDR1-236ENST00000431373 GLTPD2A6NH11 291 aa23.18■■□□□ 1.3
DDR1-236ENST00000431373 SRGAP3O43295 1099 aa23.18■■□□□ 1.3
DDR1-236ENST00000431373 LRRC24Q50LG9 513 aa23.18■■□□□ 1.3
DDR1-236ENST00000431373 HELBQ8NG08 1087 aaPredicted RBP23.18■■□□□ 1.3
DDR1-236ENST00000431373 MED23Q9ULK4 1368 aa23.17■■□□□ 1.3
DDR1-236ENST00000431373 ZNF804BA4D1E1 1349 aa23.17■■□□□ 1.3
DDR1-236ENST00000431373 MROH5Q6ZUA9 1318 aa23.17■■□□□ 1.3
DDR1-236ENST00000431373 TAF5LO75529 589 aa23.17■■□□□ 1.3
DDR1-236ENST00000431373 KCNJ4P48050 445 aa23.17■■□□□ 1.3
DDR1-236ENST00000431373 EIF6P56537 245 aaKnown RBP23.17■■□□□ 1.3
DDR1-236ENST00000431373 CHMP4BQ9H444 224 aaKnown RBP23.17■■□□□ 1.3
DDR1-236ENST00000431373 C1orf115Q9H7X2 142 aa23.17■■□□□ 1.3
DDR1-236ENST00000431373 GPBP1L1Q9HC44 474 aaPredicted RBP23.17■■□□□ 1.3
DDR1-236ENST00000431373 ZNF541Q9H0D2 1346 aa23.16■■□□□ 1.3
DDR1-236ENST00000431373 WTIPA6NIX2 430 aaPredicted RBP23.16■■□□□ 1.3
DDR1-236ENST00000431373 ZNRF3Q9ULT6 936 aa23.16■■□□□ 1.3
DDR1-236ENST00000431373 WDR90Q96KV7 1748 aa23.16■■□□□ 1.3
DDR1-236ENST00000431373 EYA2O00167 538 aa23.15■■□□□ 1.3
DDR1-236ENST00000431373 COPRSQ9NQ92 184 aa23.15■■□□□ 1.3
DDR1-236ENST00000431373 FBXO3Q9UK99 471 aa23.15■■□□□ 1.3
DDR1-236ENST00000431373 PNMA6EA0A0J9YXQ4 647 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 G3V3G9 751 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 METTL24Q5JXM2 366 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 DCAF8Q5TAQ9 597 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 SIL1Q9H173 461 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 DBNDD1Q9H9R9 158 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 PA2G4Q9UQ80 394 aaKnown RBP23.14■■□□□ 1.29
DDR1-236ENST00000431373 PSME4Q14997 1843 aa23.14■■□□□ 1.29
DDR1-236ENST00000431373 SCN9AQ15858 1988 aa23.13■■□□□ 1.29
DDR1-236ENST00000431373 ECE2O60344 883 aa23.13■■□□□ 1.29
DDR1-236ENST00000431373 CIAO1O76071 339 aa23.13■■□□□ 1.29
DDR1-236ENST00000431373 DDNO94850 711 aaPredicted RBP23.13■■□□□ 1.29
DDR1-236ENST00000431373 ATP8B2P98198 1209 aa23.13■■□□□ 1.29
DDR1-236ENST00000431373 DOK7Q18PE1 504 aa23.13■■□□□ 1.29
DDR1-236ENST00000431373 ZBTB40Q9NUA8 1239 aa23.13■■□□□ 1.29
DDR1-236ENST00000431373 YDJCA8MPS7 323 aa23.12■■□□□ 1.29
DDR1-236ENST00000431373 SNAP23O00161 211 aa23.12■■□□□ 1.29
DDR1-236ENST00000431373 ATG9AQ7Z3C6 839 aa23.12■■□□□ 1.29
DDR1-236ENST00000431373 SCN4AP35499 1836 aa23.11■■□□□ 1.29
DDR1-236ENST00000431373 KLRK1P26718 216 aa23.11■■□□□ 1.29
DDR1-236ENST00000431373 UBE4AQ14139 1066 aa23.11■■□□□ 1.29
DDR1-236ENST00000431373 C15orf52Q6ZUT6 534 aaKnown RBP23.11■■□□□ 1.29
DDR1-236ENST00000431373 GPC2Q8N158 579 aa23.11■■□□□ 1.29
DDR1-236ENST00000431373 VGLL2Q8N8G2 317 aa23.11■■□□□ 1.29
DDR1-236ENST00000431373 PDE8BO95263 885 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 IL15P40933 162 aaPredicted RBP23.1■■□□□ 1.29
DDR1-236ENST00000431373 CXCL9Q07325 125 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 POLA2Q14181 598 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 CIAPIN1Q6FI81 312 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 CEP85Q6P2H3 762 aa23.1■■□□□ 1.29
DDR1-236ENST00000431373 TXNRD3Q86VQ6 643 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms