RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 RTL5Q5HYW3 569 aaPredicted RBP20.97■□□□□ 0.95
TTC28-202ENST00000431039 ARHGAP45Q92619 1136 aa20.97■□□□□ 0.95
TTC28-202ENST00000431039 FAM89AQ96GI7 184 aa20.97■□□□□ 0.95
TTC28-202ENST00000431039 NOB1Q9ULX3 412 aaKnown RBP20.97■□□□□ 0.95
TTC28-202ENST00000431039 TLL2Q9Y6L7 1015 aa20.97■□□□□ 0.95
TTC28-202ENST00000431039 CELF2O95319 508 aaKnown RBP20.96■□□□□ 0.95
TTC28-202ENST00000431039 ZKSCAN2Q63HK3 967 aa20.96■□□□□ 0.95
TTC28-202ENST00000431039 ANKRD13DQ6ZTN6 518 aa20.96■□□□□ 0.95
TTC28-202ENST00000431039 TRPM4Q8TD43 1214 aa20.96■□□□□ 0.95
TTC28-202ENST00000431039 GPR101Q96P66 508 aaPredicted RBP20.96■□□□□ 0.95
TTC28-202ENST00000431039 ISCA1Q9BUE6 129 aa20.96■□□□□ 0.95
TTC28-202ENST00000431039 HYPKQ9NX55 129 aa20.96■□□□□ 0.95
TTC28-202ENST00000431039 AOC2O75106 756 aa20.95■□□□□ 0.94
TTC28-202ENST00000431039 TMC4Q7Z404 712 aa20.95■□□□□ 0.94
TTC28-202ENST00000431039 FRAT1Q92837 279 aaPredicted RBP20.95■□□□□ 0.94
TTC28-202ENST00000431039 CELF1Q92879 486 aaKnown RBP20.95■□□□□ 0.94
TTC28-202ENST00000431039 ZNF408Q9H9D4 720 aa20.95■□□□□ 0.94
TTC28-202ENST00000431039 CDHR2Q9BYE9 1310 aa20.95■□□□□ 0.94
TTC28-202ENST00000431039 PLIN1O60240 522 aa20.94■□□□□ 0.94
TTC28-202ENST00000431039 HIRAP54198 1017 aaPredicted RBP20.94■□□□□ 0.94
TTC28-202ENST00000431039 BEGAINQ9BUH8 593 aa20.94■□□□□ 0.94
TTC28-202ENST00000431039 CNOT7Q9UIV1 285 aaKnown RBP20.94■□□□□ 0.94
TTC28-202ENST00000431039 PTPRCP08575 1304 aa20.94■□□□□ 0.94
TTC28-202ENST00000431039 RIMBP2O15034 1052 aa20.93■□□□□ 0.94
TTC28-202ENST00000431039 ATF7IPQ6VMQ6 1270 aa20.93■□□□□ 0.94
TTC28-202ENST00000431039 G2E3Q7L622 706 aa20.93■□□□□ 0.94
TTC28-202ENST00000431039 API5Q9BZZ5 524 aaKnown RBP20.93■□□□□ 0.94
TTC28-202ENST00000431039 DBNDD1Q9H9R9 158 aa20.93■□□□□ 0.94
TTC28-202ENST00000431039 NSFL1CQ9UNZ2 370 aaKnown RBP20.93■□□□□ 0.94
TTC28-202ENST00000431039 ZBTB12Q9Y330 459 aaPredicted RBP20.93■□□□□ 0.94
TTC28-202ENST00000431039 MS4A1P11836 297 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 FLIIQ13045 1269 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 PDE3AQ14432 1141 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 SF3B3Q15393 1217 aaKnown RBP20.92■□□□□ 0.94
TTC28-202ENST00000431039 WASHC4Q2M389 1173 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 MICALL2Q8IY33 904 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 PGAP2Q9UHJ9 254 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 TSKSQ9UJT2 592 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 SCN9AQ15858 1988 aa20.92■□□□□ 0.94
TTC28-202ENST00000431039 C6orf229H3BNL8 230 aa20.91■□□□□ 0.94
TTC28-202ENST00000431039 H7C1D1 291 aa20.91■□□□□ 0.94
TTC28-202ENST00000431039 GPSM2P81274 684 aa20.91■□□□□ 0.94
TTC28-202ENST00000431039 SAPCD2Q86UD0 394 aa20.91■□□□□ 0.94
TTC28-202ENST00000431039 CASP8AP2Q9UKL3 1982 aa20.9■□□□□ 0.94
TTC28-202ENST00000431039 PSMD14O00487 310 aa20.9■□□□□ 0.94
TTC28-202ENST00000431039 IRS4O14654 1257 aaPredicted RBP20.9■□□□□ 0.94
TTC28-202ENST00000431039 TRIM27P14373 513 aa20.9■□□□□ 0.94
TTC28-202ENST00000431039 ZC3H15Q8WU90 426 aaKnown RBP20.9■□□□□ 0.94
TTC28-202ENST00000431039 ABHD8Q96I13 439 aa20.9■□□□□ 0.94
TTC28-202ENST00000431039 PHAXQ9H814 394 aaKnown RBP20.9■□□□□ 0.94
TTC28-202ENST00000431039 POLLQ9UGP5 575 aa20.9■□□□□ 0.94
TTC28-202ENST00000431039 DOK7Q18PE1 504 aa20.89■□□□□ 0.93
TTC28-202ENST00000431039 CDC37L1Q7L3B6 337 aa20.89■□□□□ 0.93
TTC28-202ENST00000431039 SAMD7Q7Z3H4 446 aa20.89■□□□□ 0.93
TTC28-202ENST00000431039 RIC3Q7Z5B4 369 aa20.89■□□□□ 0.93
TTC28-202ENST00000431039 ECE2O60344 883 aa20.88■□□□□ 0.93
TTC28-202ENST00000431039 NEFLP07196 543 aa20.88■□□□□ 0.93
TTC28-202ENST00000431039 MAP2K2P36507 400 aa20.88■□□□□ 0.93
TTC28-202ENST00000431039 TBC1D10BQ4KMP7 808 aaPredicted RBP20.88■□□□□ 0.93
TTC28-202ENST00000431039 DLK2Q6UY11 383 aa20.88■□□□□ 0.93
TTC28-202ENST00000431039 USP48Q86UV5 1035 aa20.88■□□□□ 0.93
TTC28-202ENST00000431039 DZIP1LQ8IYY4 767 aaKnown RBP20.88■□□□□ 0.93
TTC28-202ENST00000431039 SPEF2Q9C093 1822 aa20.88■□□□□ 0.93
TTC28-202ENST00000431039 FKBP5Q13451 457 aaPredicted RBP20.87■□□□□ 0.93
TTC28-202ENST00000431039 KCNQ5Q9NR82 932 aa20.87■□□□□ 0.93
TTC28-202ENST00000431039 DDX58O95786 925 aaKnown RBP20.86■□□□□ 0.93
TTC28-202ENST00000431039 EGFRP00533 1210 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 RPS8P62241 208 aaKnown RBP20.86■□□□□ 0.93
TTC28-202ENST00000431039 TRIM28Q13263 835 aaKnown RBP20.86■□□□□ 0.93
TTC28-202ENST00000431039 C20orf194Q5TEA3 1177 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 TBC1D16Q8TBP0 767 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 DPF2Q92785 391 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 EYA3Q99504 573 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 MYD88Q99836 296 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 SEC31BQ9NQW1 1179 aa20.86■□□□□ 0.93
TTC28-202ENST00000431039 RTL9Q8NET4 1388 aa20.85■□□□□ 0.93
TTC28-202ENST00000431039 PSME4Q14997 1843 aa20.85■□□□□ 0.93
TTC28-202ENST00000431039 RBM26Q5T8P6 1007 aaKnown RBP20.85■□□□□ 0.93
TTC28-202ENST00000431039 KSR2Q6VAB6 950 aa20.85■□□□□ 0.93
TTC28-202ENST00000431039 FTSJ3Q8IY81 847 aaKnown RBP20.85■□□□□ 0.93
TTC28-202ENST00000431039 HHIPL1Q96JK4 782 aa20.85■□□□□ 0.93
TTC28-202ENST00000431039 TNNQ9UQP3 1299 aa20.85■□□□□ 0.93
TTC28-202ENST00000431039 MYH3P11055 1940 aa20.84■□□□□ 0.93
TTC28-202ENST00000431039 RLBP1P12271 317 aa20.84■□□□□ 0.93
TTC28-202ENST00000431039 ZBTB38Q8NAP3 1195 aaPredicted RBP20.84■□□□□ 0.93
TTC28-202ENST00000431039 JARID2Q92833 1246 aaPredicted RBP20.84■□□□□ 0.93
TTC28-202ENST00000431039 CLUAP1Q96AJ1 413 aa20.84■□□□□ 0.93
TTC28-202ENST00000431039 CCDC85AQ96PX6 553 aaPredicted RBP20.84■□□□□ 0.93
TTC28-202ENST00000431039 UFL1O94874 794 aa20.83■□□□□ 0.93
TTC28-202ENST00000431039 HUNKP57058 714 aa20.83■□□□□ 0.93
TTC28-202ENST00000431039 KRT26Q7Z3Y9 468 aa20.83■□□□□ 0.93
TTC28-202ENST00000431039 PANK1Q8TE04 598 aa20.83■□□□□ 0.93
TTC28-202ENST00000431039 PI4KAP2A4QPH2 592 aa20.82■□□□□ 0.92
TTC28-202ENST00000431039 ADM5C9JUS6 153 aa20.82■□□□□ 0.92
TTC28-202ENST00000431039 RPS12P25398 132 aaKnown RBP20.82■□□□□ 0.92
TTC28-202ENST00000431039 PI4KAP1Q8N8J0 262 aa20.82■□□□□ 0.92
TTC28-202ENST00000431039 ZC3H12CQ9C0D7 883 aaKnown RBP20.82■□□□□ 0.92
TTC28-202ENST00000431039 ANKIB1Q9P2G1 1089 aa20.82■□□□□ 0.92
TTC28-202ENST00000431039 CCDC85CA6NKD9 419 aa20.81■□□□□ 0.92
TTC28-202ENST00000431039 F6X3S4 739 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms