RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 KLHDC4Q8TBB5 520 aa31.45■■■□□ 2.62
CPNE1-212ENST00000430570 LMNB1P20700 586 aa31.44■■■□□ 2.62
CPNE1-212ENST00000430570 RTFDC1Q9BY42 306 aaPredicted RBP31.44■■■□□ 2.62
CPNE1-212ENST00000430570 PUS3Q9BZE2 481 aaKnown RBP31.44■■■□□ 2.62
CPNE1-212ENST00000430570 RNF181Q9P0P0 153 aa31.44■■■□□ 2.62
CPNE1-212ENST00000430570 DDX19BQ9UMR2 479 aa31.44■■■□□ 2.62
CPNE1-212ENST00000430570 LDHAL6AQ6ZMR3 332 aa31.42■■■□□ 2.62
CPNE1-212ENST00000430570 POLLQ9UGP5 575 aa31.42■■■□□ 2.62
CPNE1-212ENST00000430570 DUOX1Q9NRD9 1551 aa31.42■■■□□ 2.62
CPNE1-212ENST00000430570 PODXL2Q9NZ53 605 aa31.41■■■□□ 2.62
CPNE1-212ENST00000430570 ANKIB1Q9P2G1 1089 aa31.41■■■□□ 2.62
CPNE1-212ENST00000430570 SUPT16HQ9Y5B9 1047 aaKnown RBP31.41■■■□□ 2.62
CPNE1-212ENST00000430570 LTBP1Q14766 1721 aa31.4■■■□□ 2.62
CPNE1-212ENST00000430570 WTIPA6NIX2 430 aaPredicted RBP31.4■■■□□ 2.62
CPNE1-212ENST00000430570 IARSP41252 1262 aaKnown RBP31.4■■■□□ 2.62
CPNE1-212ENST00000430570 PTPN12Q05209 780 aaKnown RBP31.4■■■□□ 2.62
CPNE1-212ENST00000430570 MTX1Q13505 466 aa31.4■■■□□ 2.62
CPNE1-212ENST00000430570 CNNM1Q9NRU3 951 aa31.4■■■□□ 2.62
CPNE1-212ENST00000430570 CHRNDQ07001 517 aa31.39■■■□□ 2.62
CPNE1-212ENST00000430570 LRRC24Q50LG9 513 aa31.39■■■□□ 2.62
CPNE1-212ENST00000430570 TBC1D16Q8TBP0 767 aa31.39■■■□□ 2.62
CPNE1-212ENST00000430570 GPR101Q96P66 508 aaPredicted RBP31.39■■■□□ 2.62
CPNE1-212ENST00000430570 ZBTB40Q9NUA8 1239 aa31.39■■■□□ 2.62
CPNE1-212ENST00000430570 XDHP47989 1333 aa31.38■■■□□ 2.61
CPNE1-212ENST00000430570 PNMA6EA0A0J9YXQ4 647 aa31.38■■■□□ 2.61
CPNE1-212ENST00000430570 SRGAP3O43295 1099 aa31.38■■■□□ 2.61
CPNE1-212ENST00000430570 SUPT20HQ8NEM7 779 aa31.38■■■□□ 2.61
CPNE1-212ENST00000430570 HELBQ8NG08 1087 aaPredicted RBP31.38■■■□□ 2.61
CPNE1-212ENST00000430570 RIPOR2Q9Y4F9 1068 aa31.38■■■□□ 2.61
CPNE1-212ENST00000430570 C6orf229H3BNL8 230 aa31.37■■■□□ 2.61
CPNE1-212ENST00000430570 PA2G4Q9UQ80 394 aaKnown RBP31.37■■■□□ 2.61
CPNE1-212ENST00000430570 ATP8B2P98198 1209 aa31.36■■■□□ 2.61
CPNE1-212ENST00000430570 AOC3Q16853 763 aa31.36■■■□□ 2.61
CPNE1-212ENST00000430570 GGA1Q9UJY5 639 aa31.36■■■□□ 2.61
CPNE1-212ENST00000430570 TAF5LO75529 589 aa31.35■■■□□ 2.61
CPNE1-212ENST00000430570 UFL1O94874 794 aa31.35■■■□□ 2.61
CPNE1-212ENST00000430570 ANKRD2Q9GZV1 360 aa31.35■■■□□ 2.61
CPNE1-212ENST00000430570 COL4A5P29400 1685 aa31.35■■■□□ 2.61
CPNE1-212ENST00000430570 DICER1Q9UPY3 1922 aaKnown RBP31.34■■■□□ 2.61
CPNE1-212ENST00000430570 PPIP5K2O43314 1243 aa31.34■■■□□ 2.61
CPNE1-212ENST00000430570 ATP2B4P23634 1241 aa31.34■■■□□ 2.61
CPNE1-212ENST00000430570 SNAP23O00161 211 aa31.33■■■□□ 2.61
CPNE1-212ENST00000430570 RIMBP2O15034 1052 aa31.33■■■□□ 2.61
CPNE1-212ENST00000430570 YY1P25490 414 aa31.33■■■□□ 2.61
CPNE1-212ENST00000430570 LARGE2Q8N3Y3 721 aa31.33■■■□□ 2.61
CPNE1-212ENST00000430570 CRBNQ96SW2 442 aa31.33■■■□□ 2.61
CPNE1-212ENST00000430570 EYA2O00167 538 aa31.32■■■□□ 2.6
CPNE1-212ENST00000430570 KIAA2012Q0VF49 1180 aa31.32■■■□□ 2.6
CPNE1-212ENST00000430570 WASHC4Q2M389 1173 aa31.32■■■□□ 2.6
CPNE1-212ENST00000430570 CEP85Q6P2H3 762 aa31.32■■■□□ 2.6
CPNE1-212ENST00000430570 SIL1Q9H173 461 aa31.32■■■□□ 2.6
CPNE1-212ENST00000430570 COPRSQ9NQ92 184 aa31.32■■■□□ 2.6
CPNE1-212ENST00000430570 POLA2Q14181 598 aa31.31■■■□□ 2.6
CPNE1-212ENST00000430570 ATG9AQ7Z3C6 839 aa31.31■■■□□ 2.6
CPNE1-212ENST00000430570 VPS33BQ9H267 617 aa31.31■■■□□ 2.6
CPNE1-212ENST00000430570 CHMP4BQ9H444 224 aaKnown RBP31.31■■■□□ 2.6
CPNE1-212ENST00000430570 LEMD3Q9Y2U8 911 aa31.31■■■□□ 2.6
CPNE1-212ENST00000430570 A0A1B0GUL6 1792 aa31.31■■■□□ 2.6
CPNE1-212ENST00000430570 SSH3Q8TE77 659 aa31.29■■■□□ 2.6
CPNE1-212ENST00000430570 EYA3Q99504 573 aa31.29■■■□□ 2.6
CPNE1-212ENST00000430570 ZNF804BA4D1E1 1349 aa31.29■■■□□ 2.6
CPNE1-212ENST00000430570 MROH5Q6ZUA9 1318 aa31.29■■■□□ 2.6
CPNE1-212ENST00000430570 TIAM2Q8IVF5 1701 aa31.28■■■□□ 2.6
CPNE1-212ENST00000430570 KLRK1P26718 216 aa31.27■■■□□ 2.6
CPNE1-212ENST00000430570 METTL24Q5JXM2 366 aa31.27■■■□□ 2.6
CPNE1-212ENST00000430570 CIAO1O76071 339 aa31.26■■■□□ 2.6
CPNE1-212ENST00000430570 TXNRD3Q86VQ6 643 aa31.26■■■□□ 2.6
CPNE1-212ENST00000430570 VGLL2Q8N8G2 317 aa31.26■■■□□ 2.6
CPNE1-212ENST00000430570 JDP2Q8WYK2 163 aa31.26■■■□□ 2.6
CPNE1-212ENST00000430570 ZC3H12CQ9C0D7 883 aaKnown RBP31.26■■■□□ 2.6
CPNE1-212ENST00000430570 FBXO3Q9UK99 471 aa31.26■■■□□ 2.6
CPNE1-212ENST00000430570 DOK7Q18PE1 504 aa31.25■■■□□ 2.59
CPNE1-212ENST00000430570 SIRT2Q8IXJ6 389 aa31.25■■■□□ 2.59
CPNE1-212ENST00000430570 FZD9O00144 591 aa31.24■■■□□ 2.59
CPNE1-212ENST00000430570 KCNJ4P48050 445 aa31.24■■■□□ 2.59
CPNE1-212ENST00000430570 NIM1KQ8IY84 436 aa31.24■■■□□ 2.59
CPNE1-212ENST00000430570 RPAP2Q8IXW5 612 aaPredicted RBP31.24■■■□□ 2.59
CPNE1-212ENST00000430570 DBNDD1Q9H9R9 158 aa31.24■■■□□ 2.59
CPNE1-212ENST00000430570 ZC3H4Q9UPT8 1303 aaKnown RBP31.23■■■□□ 2.59
CPNE1-212ENST00000430570 IRS2Q9Y4H2 1338 aa31.23■■■□□ 2.59
CPNE1-212ENST00000430570 MED23Q9ULK4 1368 aa31.23■■■□□ 2.59
CPNE1-212ENST00000430570 PDE8BO95263 885 aa31.23■■■□□ 2.59
CPNE1-212ENST00000430570 IL15P40933 162 aaPredicted RBP31.23■■■□□ 2.59
CPNE1-212ENST00000430570 ZNF541Q9H0D2 1346 aa31.22■■■□□ 2.59
CPNE1-212ENST00000430570 YDJCA8MPS7 323 aa31.22■■■□□ 2.59
CPNE1-212ENST00000430570 UBE4AQ14139 1066 aa31.21■■■□□ 2.59
CPNE1-212ENST00000430570 ZNRF3Q9ULT6 936 aa31.21■■■□□ 2.59
CPNE1-212ENST00000430570 ZNF526Q8TF50 670 aaPredicted RBP31.2■■■□□ 2.58
CPNE1-212ENST00000430570 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.2■■■□□ 2.58
CPNE1-212ENST00000430570 ECE2O60344 883 aa31.19■■■□□ 2.58
CPNE1-212ENST00000430570 SURF6O75683 361 aaKnown RBP31.19■■■□□ 2.58
CPNE1-212ENST00000430570 G3BP1Q13283 466 aaKnown RBP eCLIP31.19■■■□□ 2.582e-8■□□□□ 11.1
CPNE1-212ENST00000430570 C15orf52Q6ZUT6 534 aaKnown RBP31.19■■■□□ 2.58
CPNE1-212ENST00000430570 KCNQ5Q9NR82 932 aa31.19■■■□□ 2.58
CPNE1-212ENST00000430570 CEP126Q9P2H0 1117 aa31.19■■■□□ 2.58
CPNE1-212ENST00000430570 GLTPD2A6NH11 291 aa31.18■■■□□ 2.58
CPNE1-212ENST00000430570 FGFR2P21802 821 aa31.18■■■□□ 2.58
CPNE1-212ENST00000430570 NOP58Q9Y2X3 529 aaKnown RBP31.18■■■□□ 2.58
CPNE1-212ENST00000430570 DDNO94850 711 aaPredicted RBP31.17■■■□□ 2.58
CPNE1-212ENST00000430570 EIF6P56537 245 aaKnown RBP31.17■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms