RNA–Protein interactions for RNA: ENST00000430081.5

OPTN-208, Transcript of optineurin, humanhuman

TSL 5

Gene OPTN, Length 848 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-208ENST00000430081 LAS1LQ9Y4W2 734 aaKnown RBP13.4□□□□□ -0.26
OPTN-208ENST00000430081 ATP5J2-PTCD1G3V325 749 aa13.39□□□□□ -0.27
OPTN-208ENST00000430081 HSP90B1P14625 803 aaKnown RBP13.39□□□□□ -0.27
OPTN-208ENST00000430081 TMPOP42166 694 aaKnown RBP13.39□□□□□ -0.27
OPTN-208ENST00000430081 RTL5Q5HYW3 569 aaPredicted RBP13.39□□□□□ -0.27
OPTN-208ENST00000430081 ISCA1Q9BUE6 129 aa13.39□□□□□ -0.27
OPTN-208ENST00000430081 RTL9Q8NET4 1388 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 IRS4O14654 1257 aaPredicted RBP13.38□□□□□ -0.27
OPTN-208ENST00000430081 FKBP1BP68106 108 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 SCARF1Q14162 830 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 HDGFL1Q5TGJ6 251 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 ANKIB1Q9P2G1 1089 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 GGA1Q9UJY5 639 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 HDAC9Q9UKV0 1011 aa13.38□□□□□ -0.27
OPTN-208ENST00000430081 DUOX1Q9NRD9 1551 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 UFL1O94874 794 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 NEUROD2Q15784 382 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 PKN2Q16513 984 aaKnown RBP13.37□□□□□ -0.27
OPTN-208ENST00000430081 KRT24Q2M2I5 525 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 ANGEL2Q5VTE6 544 aaKnown RBP13.37□□□□□ -0.27
OPTN-208ENST00000430081 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
OPTN-208ENST00000430081 RSBN1LQ6PCB5 846 aaPredicted RBP13.37□□□□□ -0.27
OPTN-208ENST00000430081 RASAL3Q86YV0 1011 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 AGBL3Q8NEM8 1001 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 DBF4Q9UBU7 674 aaPredicted RBP13.37□□□□□ -0.27
OPTN-208ENST00000430081 CASP8AP2Q9UKL3 1982 aa13.37□□□□□ -0.27
OPTN-208ENST00000430081 ASTN2O75129 1339 aaPredicted RBP13.37□□□□□ -0.27
OPTN-208ENST00000430081 CHL1O00533 1208 aa13.36□□□□□ -0.27
OPTN-208ENST00000430081 ZNF280AP59817 542 aaPredicted RBP13.36□□□□□ -0.27
OPTN-208ENST00000430081 HYPKQ9NX55 129 aa13.36□□□□□ -0.27
OPTN-208ENST00000430081 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
OPTN-208ENST00000430081 HOXB7P09629 217 aa13.35□□□□□ -0.27
OPTN-208ENST00000430081 USP17L8P0C7I0 530 aa13.35□□□□□ -0.27
OPTN-208ENST00000430081 TRIM28Q13263 835 aaKnown RBP13.35□□□□□ -0.27
OPTN-208ENST00000430081 RIC3Q7Z5B4 369 aa13.35□□□□□ -0.27
OPTN-208ENST00000430081 MYOZ2Q9NPC6 264 aa13.35□□□□□ -0.27
OPTN-208ENST00000430081 TTLL12Q14166 644 aaPredicted RBP13.34□□□□□ -0.27
OPTN-208ENST00000430081 CCDC152Q4G0S7 254 aa13.34□□□□□ -0.27
OPTN-208ENST00000430081 ZBTB38Q8NAP3 1195 aaPredicted RBP13.34□□□□□ -0.27
OPTN-208ENST00000430081 SEC31BQ9NQW1 1179 aa13.34□□□□□ -0.27
OPTN-208ENST00000430081 DLG5Q8TDM6 1919 aa13.34□□□□□ -0.27
OPTN-208ENST00000430081 ANKRD36CQ5JPF3 1778 aa13.34□□□□□ -0.27
OPTN-208ENST00000430081 PITPNM2Q9BZ72 1349 aa13.34□□□□□ -0.27
OPTN-208ENST00000430081 USP17L3A6NCW0 530 aa13.33□□□□□ -0.28
OPTN-208ENST00000430081 USP17L4A6NCW7 530 aa13.33□□□□□ -0.28
OPTN-208ENST00000430081 UBE2Q2LH0YL09 131 aa13.33□□□□□ -0.28
OPTN-208ENST00000430081 TBC1D8O95759 1140 aa13.33□□□□□ -0.28
OPTN-208ENST00000430081 GOLGA2Q08379 1002 aa13.33□□□□□ -0.28
OPTN-208ENST00000430081 USP17L1Q7RTZ2 530 aa13.33□□□□□ -0.28
OPTN-208ENST00000430081 ZNF296Q8WUU4 475 aaPredicted RBP13.33□□□□□ -0.28
OPTN-208ENST00000430081 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
OPTN-208ENST00000430081 NF2P35240 595 aa13.32□□□□□ -0.28
OPTN-208ENST00000430081 PODNQ7Z5L7 613 aa13.32□□□□□ -0.28
OPTN-208ENST00000430081 CCDC146Q8IYE0 955 aa13.32□□□□□ -0.28
OPTN-208ENST00000430081 XDHP47989 1333 aa13.32□□□□□ -0.28
OPTN-208ENST00000430081 LRRC37AA6NMS7 1700 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 LAMB2P55268 1798 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 PDE8AO60658 829 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 RALBP1Q15311 655 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 DUSP27Q5VZP5 1158 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 MOB2Q70IA6 237 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 ANKRD18AQ8IVF6 992 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 OGFOD1Q8N543 542 aa13.31□□□□□ -0.28
OPTN-208ENST00000430081 CCDC85AQ96PX6 553 aaPredicted RBP13.31□□□□□ -0.28
OPTN-208ENST00000430081 GPR25O00155 361 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 TM4SF4P48230 202 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 SREBF2Q12772 1141 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 PRAMEF18Q5VWM3 479 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 CCDC191Q8NCU4 936 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 RUNDC1Q96C34 613 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 GMLQ99445 158 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 MYD88Q99836 296 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 SCAF8Q9UPN6 1271 aaKnown RBP13.3□□□□□ -0.28
OPTN-208ENST00000430081 TRIM35Q9UPQ4 493 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 ZNF609O15014 1411 aa13.3□□□□□ -0.28
OPTN-208ENST00000430081 PCCAP05165 728 aaPredicted RBP13.29□□□□□ -0.28
OPTN-208ENST00000430081 MKRN3Q13064 507 aaKnown RBP13.29□□□□□ -0.28
OPTN-208ENST00000430081 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
OPTN-208ENST00000430081 NOM1Q5C9Z4 860 aaKnown RBP13.29□□□□□ -0.28
OPTN-208ENST00000430081 FBXO46Q6PJ61 603 aaPredicted RBP13.29□□□□□ -0.28
OPTN-208ENST00000430081 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
OPTN-208ENST00000430081 CWC25Q9NXE8 425 aaPredicted RBP13.29□□□□□ -0.28
OPTN-208ENST00000430081 FKTNO75072 461 aa13.28□□□□□ -0.28
OPTN-208ENST00000430081 NBPF9Q3BBW0 867 aa13.28□□□□□ -0.28
OPTN-208ENST00000430081 ARMC9Q7Z3E5 817 aa13.28□□□□□ -0.28
OPTN-208ENST00000430081 JARID2Q92833 1246 aaPredicted RBP13.28□□□□□ -0.28
OPTN-208ENST00000430081 GCC1Q96CN9 775 aa13.28□□□□□ -0.28
OPTN-208ENST00000430081 CDC5LQ99459 802 aaKnown RBP13.28□□□□□ -0.28
OPTN-208ENST00000430081 DDX58O95786 925 aaKnown RBP13.27□□□□□ -0.29
OPTN-208ENST00000430081 MMP14P50281 582 aa13.27□□□□□ -0.29
OPTN-208ENST00000430081 PHAXQ9H814 394 aaKnown RBP13.27□□□□□ -0.29
OPTN-208ENST00000430081 MYO3BQ8WXR4 1341 aa13.27□□□□□ -0.29
OPTN-208ENST00000430081 TNRC18O15417 2968 aaPredicted RBP13.27□□□□□ -0.29
OPTN-208ENST00000430081 DDX60Q8IY21 1712 aaKnown RBP13.27□□□□□ -0.29
OPTN-208ENST00000430081 TAF1P21675 1872 aa13.27□□□□□ -0.29
OPTN-208ENST00000430081 WNT10BO00744 389 aa13.26□□□□□ -0.29
OPTN-208ENST00000430081 ALDH1A1P00352 501 aa13.26□□□□□ -0.29
OPTN-208ENST00000430081 PAPPA2Q9BXP8 1791 aa13.26□□□□□ -0.29
OPTN-208ENST00000430081 CHMP4AQ9BY43 222 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms