RNA–Protein interactions for RNA: ENST00000430029.1

PTCD1-203, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-203ENST00000430029 PRPF40BQ6NWY9 871 aaKnown RBP24.07■■□□□ 1.44
PTCD1-203ENST00000430029 KDM2BQ8NHM5 1336 aa24.07■■□□□ 1.44
PTCD1-203ENST00000430029 SASH1O94885 1247 aa24.06■■□□□ 1.44
PTCD1-203ENST00000430029 SMC5Q8IY18 1101 aa24.06■■□□□ 1.44
PTCD1-203ENST00000430029 TTLL6Q8N841 843 aa24.06■■□□□ 1.44
PTCD1-203ENST00000430029 PIM2Q9P1W9 311 aa24.06■■□□□ 1.44
PTCD1-203ENST00000430029 WWC3Q9ULE0 1092 aa24.06■■□□□ 1.44
PTCD1-203ENST00000430029 MINPP1Q9UNW1 487 aa24.06■■□□□ 1.44
PTCD1-203ENST00000430029 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.06■■□□□ 1.44
PTCD1-203ENST00000430029 IL15P40933 162 aaPredicted RBP24.05■■□□□ 1.44
PTCD1-203ENST00000430029 C7orf43Q8WVR3 580 aa24.05■■□□□ 1.44
PTCD1-203ENST00000430029 APBB1O00213 710 aa24.04■■□□□ 1.44
PTCD1-203ENST00000430029 OS9Q13438 667 aaPredicted RBP24.04■■□□□ 1.44
PTCD1-203ENST00000430029 OLFM4Q6UX06 510 aa24.04■■□□□ 1.44
PTCD1-203ENST00000430029 GCC1Q96CN9 775 aa24.04■■□□□ 1.44
PTCD1-203ENST00000430029 ATP6V0A2Q9Y487 856 aa24.04■■□□□ 1.44
PTCD1-203ENST00000430029 LRRC37AA6NMS7 1700 aa24.04■■□□□ 1.44
PTCD1-203ENST00000430029 CHRNDQ07001 517 aa24.03■■□□□ 1.44
PTCD1-203ENST00000430029 HSP90AB4PQ58FF6 505 aa24.03■■□□□ 1.44
PTCD1-203ENST00000430029 TMC4Q7Z404 712 aa24.03■■□□□ 1.44
PTCD1-203ENST00000430029 SP8Q8IXZ3 490 aa24.03■■□□□ 1.44
PTCD1-203ENST00000430029 A0A1B0GUL6 1792 aa24.03■■□□□ 1.44
PTCD1-203ENST00000430029 RAB11FIP3O75154 756 aa24.02■■□□□ 1.44
PTCD1-203ENST00000430029 TFCP2Q12800 502 aa24.02■■□□□ 1.44
PTCD1-203ENST00000430029 VGLL2Q8N8G2 317 aa24.02■■□□□ 1.44
PTCD1-203ENST00000430029 HELBQ8NG08 1087 aaPredicted RBP24.02■■□□□ 1.44
PTCD1-203ENST00000430029 RHPN1Q8TCX5 695 aa24.02■■□□□ 1.44
PTCD1-203ENST00000430029 ZNF219Q9P2Y4 722 aaPredicted RBP24.02■■□□□ 1.44
PTCD1-203ENST00000430029 DALRD3Q5D0E6 543 aaKnown RBP24.01■■□□□ 1.43
PTCD1-203ENST00000430029 METTL24Q5JXM2 366 aa24.01■■□□□ 1.43
PTCD1-203ENST00000430029 MROH5Q6ZUA9 1318 aa24.01■■□□□ 1.43
PTCD1-203ENST00000430029 SMARCA5O60264 1052 aaPredicted RBP24■■□□□ 1.43
PTCD1-203ENST00000430029 TAF5LO75529 589 aa24■■□□□ 1.43
PTCD1-203ENST00000430029 GPSM2P81274 684 aa24■■□□□ 1.43
PTCD1-203ENST00000430029 CENPQQ7L2Z9 268 aaPredicted RBP24■■□□□ 1.43
PTCD1-203ENST00000430029 ERC1Q8IUD2 1116 aa24■■□□□ 1.43
PTCD1-203ENST00000430029 KIF1BPQ96EK5 621 aa24■■□□□ 1.43
PTCD1-203ENST00000430029 DCAF8L1A6NGE4 600 aa23.99■■□□□ 1.43
PTCD1-203ENST00000430029 SNAP23O00161 211 aa23.99■■□□□ 1.43
PTCD1-203ENST00000430029 C21orf2O43822 256 aa23.99■■□□□ 1.43
PTCD1-203ENST00000430029 IL1RAPL2Q9NP60 686 aa23.99■■□□□ 1.43
PTCD1-203ENST00000430029 CEP126Q9P2H0 1117 aa23.99■■□□□ 1.43
PTCD1-203ENST00000430029 SNED1Q8TER0 1413 aa23.99■■□□□ 1.43
PTCD1-203ENST00000430029 WTIPA6NIX2 430 aaPredicted RBP23.98■■□□□ 1.43
PTCD1-203ENST00000430029 PDE8BO95263 885 aa23.98■■□□□ 1.43
PTCD1-203ENST00000430029 ANKRD45Q5TZF3 282 aa23.98■■□□□ 1.43
PTCD1-203ENST00000430029 LRRCC1Q9C099 1032 aa23.98■■□□□ 1.43
PTCD1-203ENST00000430029 BCS1LQ9Y276 419 aa23.98■■□□□ 1.43
PTCD1-203ENST00000430029 LTBP1Q14766 1721 aa23.98■■□□□ 1.43
PTCD1-203ENST00000430029 ANKRD2Q9GZV1 360 aa23.97■■□□□ 1.43
PTCD1-203ENST00000430029 XDHP47989 1333 aa23.96■■□□□ 1.43
PTCD1-203ENST00000430029 NSFL1CQ9UNZ2 370 aaKnown RBP23.96■■□□□ 1.43
PTCD1-203ENST00000430029 FGFR2P21802 821 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 NUCB1Q02818 461 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 TNNI3KQ59H18 835 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 PODXL2Q9NZ53 605 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 ANKIB1Q9P2G1 1089 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 FPGT-TNNI3KV9GXZ4 949 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 DUOX1Q9NRD9 1551 aa23.95■■□□□ 1.42
PTCD1-203ENST00000430029 ARFGEF1Q9Y6D6 1849 aa23.94■■□□□ 1.42
PTCD1-203ENST00000430029 CC2D2BQ6DHV5 1058 aa23.94■■□□□ 1.42
PTCD1-203ENST00000430029 MPNDQ8N594 471 aa23.94■■□□□ 1.42
PTCD1-203ENST00000430029 EAF2Q96CJ1 260 aaPredicted RBP23.94■■□□□ 1.42
PTCD1-203ENST00000430029 GPR108Q9NPR9 543 aa23.94■■□□□ 1.42
PTCD1-203ENST00000430029 ZNF609O15014 1411 aa23.93■■□□□ 1.42
PTCD1-203ENST00000430029 CCDC93Q567U6 631 aa23.93■■□□□ 1.42
PTCD1-203ENST00000430029 BCL11AQ9H165 835 aa23.93■■□□□ 1.42
PTCD1-203ENST00000430029 POLLQ9UGP5 575 aa23.93■■□□□ 1.42
PTCD1-203ENST00000430029 ATP2B4P23634 1241 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 TIMM10P62072 90 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 PUM3Q15397 648 aaKnown RBP23.92■■□□□ 1.42
PTCD1-203ENST00000430029 ATP2B3Q16720 1220 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 DPP8Q6V1X1 898 aaPredicted RBP23.92■■□□□ 1.42
PTCD1-203ENST00000430029 CHD1LQ86WJ1 897 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 C16orf71Q8IYS4 520 aaPredicted RBP23.92■■□□□ 1.42
PTCD1-203ENST00000430029 TBC1D16Q8TBP0 767 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 GPR101Q96P66 508 aaPredicted RBP23.92■■□□□ 1.42
PTCD1-203ENST00000430029 LNPKQ9C0E8 428 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 TMX4Q9H1E5 349 aaPredicted RBP23.92■■□□□ 1.42
PTCD1-203ENST00000430029 LEMD3Q9Y2U8 911 aa23.92■■□□□ 1.42
PTCD1-203ENST00000430029 ZNF804BA4D1E1 1349 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 IRS2Q9Y4H2 1338 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 A0A1B0GUL7 405 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 KLRK1P26718 216 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 UBE4AQ14139 1066 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 CLASRPQ8N2M8 674 aaKnown RBP23.91■■□□□ 1.42
PTCD1-203ENST00000430029 CCDC8Q9H0W5 538 aaPredicted RBP23.91■■□□□ 1.42
PTCD1-203ENST00000430029 GGA1Q9UJY5 639 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 AKAP2Q9Y2D5 859 aa23.91■■□□□ 1.42
PTCD1-203ENST00000430029 UFL1O94874 794 aa23.9■■□□□ 1.42
PTCD1-203ENST00000430029 ADORA1P30542 326 aa23.9■■□□□ 1.42
PTCD1-203ENST00000430029 AACSQ86V21 672 aa23.9■■□□□ 1.42
PTCD1-203ENST00000430029 OTUD7AQ8TE49 926 aaPredicted RBP23.9■■□□□ 1.42
PTCD1-203ENST00000430029 LPIN2Q92539 896 aa23.9■■□□□ 1.42
PTCD1-203ENST00000430029 TLR7Q9NYK1 1049 aaKnown RBP23.9■■□□□ 1.42
PTCD1-203ENST00000430029 YBX3P16989 372 aaKnown RBP eCLIP23.89■■□□□ 1.41
PTCD1-203ENST00000430029 SOGA3Q5TF21 947 aa23.89■■□□□ 1.41
PTCD1-203ENST00000430029 RTFDC1Q9BY42 306 aaPredicted RBP23.89■■□□□ 1.41
PTCD1-203ENST00000430029 FER1L6Q2WGJ9 1857 aa23.88■■□□□ 1.41
PTCD1-203ENST00000430029 C6orf229H3BNL8 230 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms