RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 LBX1P52954 281 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 CYP4F22Q6NT55 531 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 GPR101Q96P66 508 aaPredicted RBP19.17■□□□□ 0.66
MSH5-208ENST00000429846 BEGAINQ9BUH8 593 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 STK31Q9BXU1 1019 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 ZC3H12CQ9C0D7 883 aaKnown RBP19.17■□□□□ 0.66
MSH5-208ENST00000429846 SEC31BQ9NQW1 1179 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 ZBTB12Q9Y330 459 aaPredicted RBP19.17■□□□□ 0.66
MSH5-208ENST00000429846 ZNF609O15014 1411 aa19.17■□□□□ 0.66
MSH5-208ENST00000429846 HSPA8P11142 646 aaKnown RBP19.16■□□□□ 0.66
MSH5-208ENST00000429846 MAP2K2P36507 400 aa19.16■□□□□ 0.66
MSH5-208ENST00000429846 KSR2Q6VAB6 950 aa19.16■□□□□ 0.66
MSH5-208ENST00000429846 ANKIB1Q9P2G1 1089 aa19.16■□□□□ 0.66
MSH5-208ENST00000429846 GGA1Q9UJY5 639 aa19.16■□□□□ 0.66
MSH5-208ENST00000429846 RTL9Q8NET4 1388 aa19.16■□□□□ 0.66
MSH5-208ENST00000429846 CACNA1FO60840 1977 aa19.15■□□□□ 0.66
MSH5-208ENST00000429846 SHTN1A0MZ66 631 aa19.15■□□□□ 0.66
MSH5-208ENST00000429846 UFL1O94874 794 aa19.15■□□□□ 0.66
MSH5-208ENST00000429846 NEXNQ0ZGT2 675 aa19.15■□□□□ 0.66
MSH5-208ENST00000429846 NCBP3Q53F19 620 aaKnown RBP19.15■□□□□ 0.66
MSH5-208ENST00000429846 TSPYL6Q8N831 410 aa19.15■□□□□ 0.66
MSH5-208ENST00000429846 MAP3K2Q9Y2U5 619 aa19.15■□□□□ 0.66
MSH5-208ENST00000429846 GRM1Q13255 1194 aa19.14■□□□□ 0.65
MSH5-208ENST00000429846 ANKRD18AQ8IVF6 992 aa19.14■□□□□ 0.65
MSH5-208ENST00000429846 XDHP47989 1333 aa19.14■□□□□ 0.65
MSH5-208ENST00000429846 IL16Q14005 1332 aa19.14■□□□□ 0.65
MSH5-208ENST00000429846 PI4KAP2A4QPH2 592 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 G3V3G9 751 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 VIL1P09327 827 aaKnown RBP19.13■□□□□ 0.65
MSH5-208ENST00000429846 CTSWP56202 376 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 DOK7Q18PE1 504 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 DCAF8Q5TAQ9 597 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 SAMD7Q7Z3H4 446 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 WWC1Q8IX03 1113 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 PI4KAP1Q8N8J0 262 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 TSR2Q969E8 191 aaKnown RBP19.13■□□□□ 0.65
MSH5-208ENST00000429846 CDC5LQ99459 802 aaKnown RBP19.13■□□□□ 0.65
MSH5-208ENST00000429846 ZNF408Q9H9D4 720 aa19.13■□□□□ 0.65
MSH5-208ENST00000429846 POLR2AP24928 1970 aaKnown RBP19.13■□□□□ 0.65
MSH5-208ENST00000429846 SPEF2Q9C093 1822 aa19.12■□□□□ 0.65
MSH5-208ENST00000429846 CA12O43570 354 aa19.12■□□□□ 0.65
MSH5-208ENST00000429846 TWISTNBQ3B726 338 aaPredicted RBP19.12■□□□□ 0.65
MSH5-208ENST00000429846 TBC1D10BQ4KMP7 808 aaPredicted RBP19.12■□□□□ 0.65
MSH5-208ENST00000429846 IGKV5-2P06315 115 aa19.11■□□□□ 0.65
MSH5-208ENST00000429846 KIF4BQ2VIQ3 1234 aa19.11■□□□□ 0.65
MSH5-208ENST00000429846 KRT26Q7Z3Y9 468 aa19.11■□□□□ 0.65
MSH5-208ENST00000429846 DCPSQ96C86 337 aaKnown RBP19.11■□□□□ 0.65
MSH5-208ENST00000429846 KCNQ5Q9NR82 932 aa19.11■□□□□ 0.65
MSH5-208ENST00000429846 ATP2B4P23634 1241 aa19.1■□□□□ 0.65
MSH5-208ENST00000429846 BRPF1P55201 1214 aaPredicted RBP19.1■□□□□ 0.65
MSH5-208ENST00000429846 CCDC184Q52MB2 194 aa19.1■□□□□ 0.65
MSH5-208ENST00000429846 USP48Q86UV5 1035 aa19.1■□□□□ 0.65
MSH5-208ENST00000429846 AGBL3Q8NEM8 1001 aa19.1■□□□□ 0.65
MSH5-208ENST00000429846 CCDC85AQ96PX6 553 aaPredicted RBP19.1■□□□□ 0.65
MSH5-208ENST00000429846 NEURL1BA8MQ27 555 aa19.09■□□□□ 0.65
MSH5-208ENST00000429846 AOC2O75106 756 aa19.09■□□□□ 0.65
MSH5-208ENST00000429846 EGFRP00533 1210 aa19.09■□□□□ 0.65
MSH5-208ENST00000429846 TTLL11Q8NHH1 800 aa19.09■□□□□ 0.65
MSH5-208ENST00000429846 JARID2Q92833 1246 aaPredicted RBP19.09■□□□□ 0.65
MSH5-208ENST00000429846 BSDC1Q9NW68 430 aaPredicted RBP19.09■□□□□ 0.65
MSH5-208ENST00000429846 MED23Q9ULK4 1368 aa19.08■□□□□ 0.65
MSH5-208ENST00000429846 SLC4A2P04920 1241 aa19.08■□□□□ 0.64
MSH5-208ENST00000429846 NOGQ13253 232 aa19.08■□□□□ 0.64
MSH5-208ENST00000429846 CWF19L2Q2TBE0 894 aaKnown RBP19.08■□□□□ 0.64
MSH5-208ENST00000429846 RSBN1LQ6PCB5 846 aaPredicted RBP19.08■□□□□ 0.64
MSH5-208ENST00000429846 PODNQ7Z5L7 613 aa19.08■□□□□ 0.64
MSH5-208ENST00000429846 HUNKP57058 714 aa19.07■□□□□ 0.64
MSH5-208ENST00000429846 ZNF280AP59817 542 aaPredicted RBP19.07■□□□□ 0.64
MSH5-208ENST00000429846 RBM26Q5T8P6 1007 aaKnown RBP19.07■□□□□ 0.64
MSH5-208ENST00000429846 SULF1Q8IWU6 871 aa19.07■□□□□ 0.64
MSH5-208ENST00000429846 GBA2Q9HCG7 927 aaPredicted RBP19.07■□□□□ 0.64
MSH5-208ENST00000429846 GGA3Q9NZ52 723 aa19.07■□□□□ 0.64
MSH5-208ENST00000429846 FLIIQ13045 1269 aa19.06■□□□□ 0.64
MSH5-208ENST00000429846 UBE3BQ7Z3V4 1068 aa19.06■□□□□ 0.64
MSH5-208ENST00000429846 C2orf69Q8N8R5 385 aa19.06■□□□□ 0.64
MSH5-208ENST00000429846 GREM2Q9H772 168 aa19.06■□□□□ 0.64
MSH5-208ENST00000429846 MRS2Q9HD23 443 aa19.06■□□□□ 0.64
MSH5-208ENST00000429846 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 ZNF646O15015 1829 aaPredicted RBP19.05■□□□□ 0.64
MSH5-208ENST00000429846 ADM5C9JUS6 153 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 H7C1W4 665 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 G2E3Q7L622 706 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 PLA2G12BQ9BX93 195 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 MYH16Q9H6N6 1097 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 MINPP1Q9UNW1 487 aa19.05■□□□□ 0.64
MSH5-208ENST00000429846 USP17L3A6NCW0 530 aa19.04■□□□□ 0.64
MSH5-208ENST00000429846 USP17L4A6NCW7 530 aa19.04■□□□□ 0.64
MSH5-208ENST00000429846 ZEB1P37275 1124 aaPredicted RBP19.04■□□□□ 0.64
MSH5-208ENST00000429846 IGHMBP2P38935 993 aaKnown RBP19.04■□□□□ 0.64
MSH5-208ENST00000429846 GCKRQ14397 625 aa19.04■□□□□ 0.64
MSH5-208ENST00000429846 RGMBQ6NW40 437 aa19.04■□□□□ 0.64
MSH5-208ENST00000429846 USP17L1Q7RTZ2 530 aa19.04■□□□□ 0.64
MSH5-208ENST00000429846 GMLQ99445 158 aa19.04■□□□□ 0.64
MSH5-208ENST00000429846 PITPNM2Q9BZ72 1349 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 ANP32CO43423 234 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 USP17L8P0C7I0 530 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 CCT4P50991 539 aaKnown RBP19.03■□□□□ 0.64
MSH5-208ENST00000429846 FKBP5Q13451 457 aaPredicted RBP19.03■□□□□ 0.64
MSH5-208ENST00000429846 WDR63Q8IWG1 891 aa19.03■□□□□ 0.64
MSH5-208ENST00000429846 LINS1Q8NG48 757 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms