RNA–Protein interactions for RNA: ENST00000429746.1

CTSD-203, Transcript of cathepsin D, humanhuman

TSL 3

Gene CTSD, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-203ENST00000429746 TBC1D16Q8TBP0 767 aa22■■□□□ 1.11
CTSD-203ENST00000429746 GPR101Q96P66 508 aaPredicted RBP22■■□□□ 1.11
CTSD-203ENST00000429746 CDC5LQ99459 802 aaKnown RBP22■■□□□ 1.11
CTSD-203ENST00000429746 VPS33BQ9H267 617 aa22■■□□□ 1.11
CTSD-203ENST00000429746 BICC1Q9H694 974 aaKnown RBP22■■□□□ 1.11
CTSD-203ENST00000429746 MINPP1Q9UNW1 487 aa22■■□□□ 1.11
CTSD-203ENST00000429746 SCN4AP35499 1836 aa21.99■■□□□ 1.11
CTSD-203ENST00000429746 NSFL1CQ9UNZ2 370 aaKnown RBP21.99■■□□□ 1.11
CTSD-203ENST00000429746 PPIP5K2O43314 1243 aa21.98■■□□□ 1.11
CTSD-203ENST00000429746 DDNO94850 711 aaPredicted RBP21.98■■□□□ 1.11
CTSD-203ENST00000429746 LARGE2Q8N3Y3 721 aa21.97■■□□□ 1.11
CTSD-203ENST00000429746 SUPT20HQ8NEM7 779 aa21.97■■□□□ 1.11
CTSD-203ENST00000429746 MEIS3Q99687 375 aa21.97■■□□□ 1.11
CTSD-203ENST00000429746 IRS2Q9Y4H2 1338 aa21.97■■□□□ 1.11
CTSD-203ENST00000429746 PSME4Q14997 1843 aa21.96■■□□□ 1.11
CTSD-203ENST00000429746 IQCA1LA6NCM1 817 aa21.96■■□□□ 1.11
CTSD-203ENST00000429746 YDJCA8MPS7 323 aa21.96■■□□□ 1.11
CTSD-203ENST00000429746 RLBP1P12271 317 aa21.96■■□□□ 1.11
CTSD-203ENST00000429746 FRAT1Q92837 279 aaPredicted RBP21.96■■□□□ 1.11
CTSD-203ENST00000429746 ZNF594Q96JF6 807 aaPredicted RBP21.96■■□□□ 1.11
CTSD-203ENST00000429746 L3MBTL3Q96JM7 780 aaPredicted RBP21.96■■□□□ 1.11
CTSD-203ENST00000429746 TMX4Q9H1E5 349 aaPredicted RBP21.96■■□□□ 1.11
CTSD-203ENST00000429746 ANKRD18BA2A2Z9 1011 aa21.95■■□□□ 1.1
CTSD-203ENST00000429746 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
CTSD-203ENST00000429746 XDHP47989 1333 aa21.95■■□□□ 1.1
CTSD-203ENST00000429746 ADAMTSL1Q8N6G6 1762 aa21.94■■□□□ 1.1
CTSD-203ENST00000429746 RFX5P48382 616 aaPredicted RBP21.94■■□□□ 1.1
CTSD-203ENST00000429746 IFIT5Q13325 482 aaKnown RBP21.94■■□□□ 1.1
CTSD-203ENST00000429746 ZKSCAN2Q63HK3 967 aa21.94■■□□□ 1.1
CTSD-203ENST00000429746 JDP2Q8WYK2 163 aa21.94■■□□□ 1.1
CTSD-203ENST00000429746 CLUAP1Q96AJ1 413 aa21.94■■□□□ 1.1
CTSD-203ENST00000429746 IPO8O15397 1037 aaKnown RBP21.93■■□□□ 1.1
CTSD-203ENST00000429746 IGHMBP2P38935 993 aaKnown RBP21.93■■□□□ 1.1
CTSD-203ENST00000429746 TMEM57Q8N5G2 664 aa21.93■■□□□ 1.1
CTSD-203ENST00000429746 UFL1O94874 794 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 CHRNDQ07001 517 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 CXCL9Q07325 125 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 WASHC4Q2M389 1173 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 NIM1KQ8IY84 436 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 PUS3Q9BZE2 481 aaKnown RBP21.92■■□□□ 1.1
CTSD-203ENST00000429746 GGA1Q9UJY5 639 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 ZNRF3Q9ULT6 936 aa21.92■■□□□ 1.1
CTSD-203ENST00000429746 C6orf229H3BNL8 230 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 SNAP23O00161 211 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 KLRK1P26718 216 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 TXNRD3Q86VQ6 643 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 GPC2Q8N158 579 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 KCNQ5Q9NR82 932 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 ANKIB1Q9P2G1 1089 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 CHMP3Q9Y3E7 222 aa21.91■■□□□ 1.1
CTSD-203ENST00000429746 MED23Q9ULK4 1368 aa21.9■■□□□ 1.1
CTSD-203ENST00000429746 RIMBP2O15034 1052 aa21.9■■□□□ 1.1
CTSD-203ENST00000429746 ATP2B4P23634 1241 aa21.9■■□□□ 1.1
CTSD-203ENST00000429746 LRRFIP2Q9Y608 721 aaKnown RBP21.9■■□□□ 1.1
CTSD-203ENST00000429746 UBTFL1P0CB47 393 aaPredicted RBP21.89■■□□□ 1.09
CTSD-203ENST00000429746 SCNN1DP51172 638 aa21.89■■□□□ 1.09
CTSD-203ENST00000429746 CCDC57Q2TAC2 916 aa21.89■■□□□ 1.09
CTSD-203ENST00000429746 KLHDC4Q8TBB5 520 aa21.89■■□□□ 1.09
CTSD-203ENST00000429746 MPHOSPH8Q99549 860 aa21.89■■□□□ 1.09
CTSD-203ENST00000429746 DBNDD1Q9H9R9 158 aa21.89■■□□□ 1.09
CTSD-203ENST00000429746 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.09
CTSD-203ENST00000429746 EIF6P56537 245 aaKnown RBP21.88■■□□□ 1.09
CTSD-203ENST00000429746 DOK7Q18PE1 504 aa21.88■■□□□ 1.09
CTSD-203ENST00000429746 CHADLQ6NUI6 762 aa21.88■■□□□ 1.09
CTSD-203ENST00000429746 ECE2O60344 883 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 TAF5LO75529 589 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 PTPN12Q05209 780 aaKnown RBP21.87■■□□□ 1.09
CTSD-203ENST00000429746 LRRC24Q50LG9 513 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 LDHAL6AQ6ZMR3 332 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 VGLL2Q8N8G2 317 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 HELBQ8NG08 1087 aaPredicted RBP21.87■■□□□ 1.09
CTSD-203ENST00000429746 KLRG1Q96E93 195 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 EYA3Q99504 573 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 TAF1DQ9H5J8 278 aaPredicted RBP21.87■■□□□ 1.09
CTSD-203ENST00000429746 HACL1Q9UJ83 578 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 RCAN3Q9UKA8 241 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 LEMD3Q9Y2U8 911 aa21.87■■□□□ 1.09
CTSD-203ENST00000429746 ZNF804BA4D1E1 1349 aa21.86■■□□□ 1.09
CTSD-203ENST00000429746 POTEIP0CG38 1075 aa21.86■■□□□ 1.09
CTSD-203ENST00000429746 POTEJP0CG39 1038 aa21.86■■□□□ 1.09
CTSD-203ENST00000429746 MTX1Q13505 466 aa21.86■■□□□ 1.09
CTSD-203ENST00000429746 PNMA8AQ86V59 439 aaPredicted RBP21.86■■□□□ 1.09
CTSD-203ENST00000429746 LDHDQ86WU2 507 aa21.86■■□□□ 1.09
CTSD-203ENST00000429746 DZIP1LQ8IYY4 767 aaKnown RBP21.86■■□□□ 1.09
CTSD-203ENST00000429746 ANKRD2Q9GZV1 360 aa21.86■■□□□ 1.09
CTSD-203ENST00000429746 RAD17O75943 681 aa21.85■■□□□ 1.09
CTSD-203ENST00000429746 C15orf52Q6ZUT6 534 aaKnown RBP21.85■■□□□ 1.09
CTSD-203ENST00000429746 ZC3H12CQ9C0D7 883 aaKnown RBP21.85■■□□□ 1.09
CTSD-203ENST00000429746 ZNF609O15014 1411 aa21.85■■□□□ 1.09
CTSD-203ENST00000429746 CIAPIN1Q6FI81 312 aa21.84■■□□□ 1.09
CTSD-203ENST00000429746 ATG9AQ7Z3C6 839 aa21.84■■□□□ 1.09
CTSD-203ENST00000429746 JMYQ8N9B5 988 aa21.84■■□□□ 1.09
CTSD-203ENST00000429746 PANK1Q8TE04 598 aa21.84■■□□□ 1.09
CTSD-203ENST00000429746 GJA3Q9Y6H8 435 aa21.84■■□□□ 1.09
CTSD-203ENST00000429746 PSMD14O00487 310 aa21.83■■□□□ 1.09
CTSD-203ENST00000429746 ZBTB7BO15156 539 aaPredicted RBP21.83■■□□□ 1.09
CTSD-203ENST00000429746 GNAI3P08754 354 aa21.83■■□□□ 1.09
CTSD-203ENST00000429746 SHTN1A0MZ66 631 aa21.82■■□□□ 1.08
CTSD-203ENST00000429746 PLIN1O60240 522 aa21.82■■□□□ 1.08
CTSD-203ENST00000429746 EPHX2P34913 555 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms